Lonchura striata (white-rumped munia): 110472799
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Entry
110472799 CDS
T05897
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr02010
ABC transporters
lsr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110472799 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110472799 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsr02000
]
110472799 (ABCA1)
Transporters [BR:
lsr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110472799 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
110472799
NCBI-ProteinID:
XP_021390509
LinkDB
All DBs
Position
Z:68090154..68182073
Genome browser
AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLVEIAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDT
SIEDIQMVLGKLRKLGNSSGLDLKLRDFLVDNETFSDFLHHNVSMPSSAIEELLDAGVNL
QQVIVSGYRMRLRDLCNGSRSSEFLMIQNRTAAMGSEPFICTLSKEKLHATEQALRANLD
PLKPLQRQLSFNSSLWDLSETVETLRASFGKLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDFINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILFTPDTPAVRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDVARFLSNSPEDFETENG
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVPTEVRLINKSLELLDERRFWAGIVFT
GIVPESTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFMRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLNNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
IFLSIFGVVTIIQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMMFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEESQDRQQPHLDQKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVSEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFEPNDSDIDPAESRETDLLSGVDGKGSYQM
KGWKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTHKLLDALLDKPGLGTRCMQGHSIPDTPCTVGQKEWTTA
SVPESVLDIFLKGNWSMQNPSPSCQCSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSHEVTDAIKQVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVRPVVYWLANFVWDMCNYIVPATLVVIIFVCFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTDNQLKDI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELMTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctgctatggaagaacttcacgtacagaagaaga
cagactttccagctgctggtcgaaattgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcactttccaaataaagct
atgccttcagcaggaaccttgccgtggatacaggggatcatctgcaatgccaacaaccca
tgtttccgctatccaacccctggggaatcccctggtattgttggaaacttcaatgcctcc
attgtttcccgcctgttctcggatgccaggaggttactgctgtacagccagcaggacaca
agcatagaggatatccagatggtcctgggaaaactacgcaagctgggaaattcctctggc
ttagacttgaaacttcgggatttcctggttgacaatgagacattctctgacttcctccat
cataatgtgtccatgccatcatctgccatagaggagctactggatgcaggggtcaacctc
cagcaggtcattgtgtctggttatcgaatgcgactgcgagatctctgcaatggctcaagg
tcatctgaatttctaatgatccaaaatcgcacggcagccatgggctctgaacccttcatt
tgcaccttgtcaaaggaaaaactccatgcaactgagcaagccttacgtgctaacctggat
cctttgaagcctcttcagagacaactttctttcaattcctccttgtgggatctgtcagaa
actgtggaaactttgagagcgagctttgggaagcttgttaaagagctgctgagcatgaag
agctggagtgacatgaggcaagaggtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacacagatctatcaggctgtgtcacgcatcgtgtgtggccatcctgaaggtggaggg
ctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactgttcggaggc
aacagcactgaagatgattttattaacttctatgataactccacaacaccctactgcaat
gagctaatgaagaacctggaatccagcccgctttccaggattatctggagggctctgaaa
cccttgctgattgggaagatcttgttcactccagatacgccagctgtaaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaagatttggacatttatggaaagtagtcaggaaatggatctaatt
cggacgttgctgaaaggcaaagccctctgggacctgcacttgccagcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaacagtccagaggactttgagacagaaaatggc
tctgtgtacacctgggtggatgccttcaatgagacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacctggacaaactggagcctgtgcccacagaagtccggctc
attaacaaatccttggaacttctggatgaaaggaggttctgggctggcatagtcttcact
ggaatagttcctgaaagcacagaccttcctcaacatgtgaaatacaagatacgcatggac
attgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtctggggaggctttgtctacctgcaggatgtg
gtagaacaggccatcatcagagttcagacaggcacggagaagaagacaggagtttatgtg
cagcagatgccctacccatgttatgtggatgacatattcatgcgtgtcatgagccgctcc
atgcctctcttcatgacactagcttggatctactcagtggctgtgataattaagggcatt
gtgtatgagaaggaagcccggctgaaagaaacaatgaggattatgggacttaacaatggc
atcctgtggttaagctggttcattagcagccttgtccctctcctgatgagtgcaggactg
ctggtgctgatcctgaagatggggaatctgctgccttacagcgatcctagtgtggtattc
attttcctctcgatcttcggtgttgtgaccatcatccagtgcttcctcatcagcaccgtc
ttctccagggccaacctggcagctgcctgtgggggcattgtctacttcacgctctacctg
ccttatgtgctgtgtgttgcctggcaggaccacatcagcttctcactcaagatttttgca
agcctgctgtctccagtagcctttggttttggttgtgagtactttgccctgtttgaggag
caaggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatcagccgtcatgatgatgttcgataccttcctgtatggagtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
ttcacaaaatcatactggtttggggaggaatcacaggacaggcagcagccccatcttgac
cagaaggggtcttcagaagtctgcaaggaagaagagccggtgcatctgagtcttggtgtt
tccatccagaacctggtcaaggtttaccgtgatggcaagaaagttgctgtagatggtctc
acgcttaacttttatgaaggacaaatcacctcctttctgggacataatggagcagggaaa
accactaccatgtccattttgactggcttgttccccccaacttcgggtacagccttcatc
ctgggcaaagatatccgctctgagcttagcaccatcaggcagaacctgggtgtatgtcca
caacacaatgtgctgtttgacttgctgactgtagaggagcacatctggttctatgctcgg
ctcaaagggctgccagaaaagaaggtgaaagaggagatggagcagatggcgacagatgtt
ggtttgcctcacaaactgaaagctaggacaagcaagctctctggtggcatgcagaggaag
ctctctgttgccttagcttttgttggtggctccaaggttgtcattctggatgagcctaca
gctggggtggatccttattctcgcagaggaatatgggaactgcttctgaagtatcggcaa
ggtcgcaccatcattctctccacacaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcttccctcttcctgaagaac
cagctgggaacaggctattatttgaccctggtcaaaaaggatgtagattcttctctgagc
tcctgccgaaacagcagcagcacagtttcctatctgaaaaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacacattgacaatagatgtg
tctgcaatttcaaatctcattacaaaacatgtttctgaggcaagactggtggaggacata
ggtcatgaattaacctatgtcttgccatacaaagctgctaaagaaggagcttttgtggag
ctgttccatgaaattgatgaccgtctttctgatcttggcatttccagctatggcatctcg
gaaactaccctggaggagatcttcctgaaagtggctgatgatagcggtgtggatgctgaa
acctcagatggtacattgccagccagaaggaacagacgtgtgtttggagacagacagagc
tgccttcgtccgtttacagaagatgatgcatttgagcctaatgactcagacatagatcca
gcagaatccagagagacagaccttctcagtggtgtggatgggaaaggctcctaccaaatg
aagggctggaagctcacccagcagcagttcatggctttgttgtggaagaggatgctcatt
gccaagagaagccggaagggtttttttgcccagattgtgctgccagctgtctttgtgtgt
attgctctcatgttcagcctgattgttcctccttttgggaagtatcccagcctggaattg
caaccctggatgtatgatgagcagtacacttttattagcaatgatgctccagaagatgca
ggcactcacaagcttttggatgcccttcttgataagccggggcttgggacacgctgtatg
cagggacattccatcccggacactccttgcactgtggggcagaaggaatggaccacagct
tcagtcccagagtcagtactggacatcttcctgaaaggcaactggagcatgcagaatcct
tccccatcttgccagtgtagcagtgagaagatcaagaagatgctgcctgtatgcccccct
ggtgcaggcggcctgccacccccacagcgtgagcaagacacagcagacatcctccagaac
ctgacaggccgcaatatatcagactacctggtgaagacctatgcgcagatcattgggaaa
agcttaaagaataaaatctgggtgaatgaattcaggtatggtggcttttccttgggggcc
agcagttctctcgtgcttcctccaagtcatgaagtcactgatgccattaaacaagtgaag
aaaattttggaactggcccaggggagttctggggatcgatttctcaacagtttatcaagt
ttcatgaaaggcctggatacaaagaacaatgtgaaggtgtggtttaacaacaagggctgg
catgccattgcatccttcctgaatgtgatcaacaatgccatccttcgggccaacctccag
cagggtgaaaatcccagtgcttatgggatcactgccttcaaccacccactgaacctcacc
aagcagcagctctctgaagtagctctgatgaccacctctgtggatgtccttgtgtccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggttttccttattcaggaa
cgtgtcagcaaggctaaacatttgcagttcatcagtggtgtgaggcctgtggtctactgg
ctggccaactttgtgtgggatatgtgcaactacattgttccagccacactagttgtcatc
atcttcgtctgcttccaacagaagtcctatgtatcctcctccaacttgcctgtgctggct
ctccttctgtttctctatgggtggtccatcacccctctcatgtatccagcctcctttgtg
ttcaaaatccccagcacggcctacgttgtgctgaccagtgtgaatctcttcattggcatc
aatgggagcgtggccacctttgtcctggagctcttcactgacaatcaactgaaggacatc
aatgacatcctgaagtctgtcttcctcatcttcccccacttctgcctgggccggggactc
attgacatggtgaaaaaccaggctatggctgatgctctggagagatttggagagaatcgt
tttgtgtcccctctgtcatgggacctggtgggaaggaacctctttgccatggcagtagaa
ggtgtggtgttttttctcatcacagtgctcatccagtacaggttcttcatcaaacccagg
cctgtctatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagagg
cagaggataataagtggaggaggacagagtgacattttggaaatcaaggagctaaccaag
atttacagaatgaagagaaagccagcagttgacaggatctgtgttggaatcccccctggg
gagtgttttggactcctgggagtaaacggtgctggcaagtcatctacttttaagatgcta
actggtgatacagatgtgacgggaggagaagctttcctcaaaggaaacagtatcttgtcc
aacatccaagaagtccatcagaacatgggctactgcccacagtttgatgctgttaatgaa
ctgatgacagggcgagagcacttggagttctttgcactcctgagaggtgttccagagaaa
gaagtctgcaaggttggtgagtgggcaattcggaaactaggccttgtgaaatacggagaa
aaatatgctgggaattacagtggagggaacagacgcaagctttccacagccattgctctc
attggagggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagca
cgtcgcttcttgtggaactgtgctctgagtataatcaaggaggggagatcagtggtgctt
acatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcaataatggtcaat
gggagattcaggtgtctgggcagtgtccagcacctaaaaaacaggtttggagatggctac
accatagtggtgagaattgcaggggcaaacccagacttaaagcctgttgaggagttcttt
gggcatgccttccctggaagtgtcctaaaggaaaaacatcggaatatgctgcagtaccag
cttccctcttcaccatcctccctggccaaaatattcagtattctctcccagaacaagaag
agactccacatagaagactactctgtttctcagaccacgcttgaccaagtttttgtaaat
tttgctaaggaccaaagtgatgacgaccatactaaggacctgtcattgcacaaaaaccag
actgtggtggacattgcaatccttaactccttcctgcaagatgagaaggtaaaagaaagt
tgcgtgtga
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integrated database retrieval system
