Lonchura striata (white-rumped munia): 110472813
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Entry
110472813 CDS
T05897
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110472813 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110472813 (POLR1B)
Enzymes [BR:
lsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110472813 (POLR1B)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110472813 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
110472813
NCBI-ProteinID:
XP_021390538
LinkDB
All DBs
Position
3:complement(19493479..19507846)
Genome browser
AA seq
1123 aa
AA seq
DB search
MAGAGTGSRPDPHRLRRPRRGTAQRHLTSAHIESFNYAVSEGVYRAVQEVPSVEFALKDT
RLALTLVGVSITPPAVPAGTVCQERRVFPAECRGVRSTYRGRITADISWSLNDTPQGTIK
QPLGYIPIMVKSKLCNLYGFSPQDLMQHREEEEEMGGYFIINGLEKVIRMLIMPRRNFPL
AMTRQKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFRKELFFLPLGF
ALKALVNFPDYQIFEELVKGREDDTFYANCVTEMMRAVVDAGCLTQQNVLDYLGKSFRVK
LNLPEWYSNEQAADFILSNCICIHLTNRTEKFYLLCMMTQKLYAFAKGECMEDNPDSLMN
HEVLTPGQLFLMFLKERLETWLQSVRFVLEKRAEKADVTLNTDSLVKAFSLAPDFTKPFE
YLLATGNLRSKTGLGMLQASGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTTTVRKLLP
ESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVPVRDIPPLLCSLGVTPIDAAPSRPYS
ECYRVVLDGSMVGWVEQELAPEIAQTLRRFKITQEKRFPARAEVVLIPMTGKPSLYPGLF
IFTNPCRMVRPVRNLSYGRNEWIGTLEQIFMNVATLESEVVPGVTTHQELFPHSILSVVA
NLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRPSMYDYYG
MDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKAESIDLSLKASRAGDN
LVFGIKPGDPNIGEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYPSKEVGIVDN
VRLCSNDRGTGKFKKVCITVRVPRNPTIGDKFASRHGQKGILSQLWPVEDMPFTENGMVP
DILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKKSALKYFGETLASAGY
NFFGTEKMYSGISGVELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQPVKGRNV
EGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSMTSPVLEKLSRSSVTS
SRRYSCSICSEVDTIEVVPVPHVFRYFVAELAAMNIKTKLNVE
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgccgggacggggtcgcgcccggacccgcaccgcctgcggcggccgcggcgc
ggcacggcccagcgccacctcaccagcgcccacatcgagtccttcaactacgccgtcagc
gagggcgtctatcgcgccgtgcaggaggtgccttcggtggagttcgcgctgaaggacacc
cggctggcgctgacgctggtcggggtgtccatcacccctcccgccgtgccggccgggacg
gtgtgccaggagaggagggtgttcccagcggagtgccgcggggtccgcagcacctaccgc
ggcaggatcaccgccgacatcagctggtcattgaatgacacgccacaagggactatcaaa
cagcccctaggatatattccaatcatggtgaagtccaaattgtgcaacctctatggtttt
tctccacaagaccttatgcagcatcgtgaggaagaagaggaaatgggaggctactttata
atcaatggcttagaaaaagtaatcaggatgctgattatgcccaggcgaaacttccctctt
gcaatgacaagacaaaagtggaaaaacagaggccctggtttcacagagtatggggtggtg
atgcactgtgtcaaggatgagcatactgcaataaatatgaaccttcactacttggaaaat
ggctgtgtcatggtgaatttcatttttcgcaaagagttgttcttcctccccttgggattt
gctctgaaggcattggttaatttcccagactaccagatttttgaagagttggtgaaagga
agggaagatgacaccttttatgcgaactgtgttactgagatgatgagagcggtggtggat
gctggctgtttgacacagcaaaacgtcctggattacctgggaaagagcttcagagtgaaa
ctcaacctgcctgagtggtacagcaatgaacaggctgcagatttcattctgagcaattgt
atctgtattcacctgaccaatagaactgaaaagttctacctgctctgtatgatgacccag
aagctctatgcttttgccaaaggggaatgcatggaagataatccagacagtcttatgaat
cacgaggtgcttaccccaggacagctcttccttatgttcttaaaggagaggcttgaaacc
tggctgcagtctgttaggtttgttttggagaaaagagcagaaaaggcagatgtcacccta
aatacagacagcctggtgaaggcattcagcctggcaccagactttaccaagccatttgag
tatctgcttgcaactggtaacctgaggtctaaaacagggctgggcatgttgcaggccagt
ggtctctgtgtggtgggggacaagctgaatttcatccgctacctctcccacttccgctgc
atacacagaggggcagcgttttcccagatgagaaccacgactgtccgcaagctgctgccc
gaatcctggggcttcctgtgccctgtggacaccccggacggagagccctgtgggctgatg
aaccacatgacagctctgtgtgaaattgtcactgagatggtgcccgtgagagacattcca
cctttgttatgttccctgggtgtcacccccattgatgcagctccaagccggccttactca
gaatgctacagagttgtgctggatggttccatggtgggctgggtagagcaggaactggct
cccgagattgcacaaactctccgtcgtttcaagataacacaagagaagagatttcctgca
cgggcagaagtggtccttatcccaatgacaggaaaacccagcctgtatcctggactcttc
attttcactaacccttgtaggatggtgcggcctgtcagaaacctgtcctatggaaggaat
gaatggattgggactctggagcagatcttcatgaatgtagccactctggagtcagaggtg
gtgcctggagtgaccactcaccaggaactcttccctcacagcattttgagtgtggtggcc
aatctcattcccttttctgaccacaaccaaagtccacggaacatgtaccagtgccagatg
ggaaagcagaccatggggtttcctgtttacaactacaaggatcgctcagataacaagctg
taccacctgcacacccctcagagccctctggtgaggcccagcatgtatgactattatggg
atggacagctatcctgttggcaccaattccatcgtggctgtcatctcctacagtggctat
gacatggaagatgcaatgattgtaaataaatcttcctggcagagaggatttgcttatgga
agtgttatcaaggcggagagcattgacctttcccttaaagccagcagggcaggagataat
ttagtatttggcatcaagcctggcgatccaaacattggggagaagctggatgctgatgga
ctgccttttgttgggtctatcctgcagcctggggatcccttctacagcttcatgaacctc
aacacaggggagaccttcactgtgtactatccgagtaaggaagtgggcattgtggacaac
gttagattgtgcagcaatgaccgtggcactgggaagttcaagaaggtttgcatcactgtg
agggttccccgaaatcccactattggagacaaatttgccagccgtcacggacagaaaggt
atcctgagccagctctggcccgtcgaggacatgcccttcacagagaatgggatggttcca
gacatcctcttcaaccctcatggctttccctcccgcatgaccattgggatgttaattgag
agcatggcagggaagtcagcagccctacatggggtctcctatgatgccactcccttcacc
ttcaccgagaagaagtctgctctgaaatactttggtgagactttagcgagcgcaggttac
aacttctttggcacagaaaagatgtacagcggcatcagcggggtggagctggaggctgac
atctttgtgggggtggtgtactaccagcgtctgcgccacatggtctctgacaagttccag
gtgaggaccacggggccccgagatgctgtcaccaaccagcctgtcaagggcaggaacgtg
gaaggtgggatccgcttcggcgagatggaacgggatgctctgctggcccatggcacgtcc
ttcctgctgcaggatcgcctgttcaactgctccgacggctccgtagcctacgtgtgcaca
agctgcggcagcatgacatcccctgtgctggagaaactgtcccgctcctctgtgaccagc
agcaggaggtattcctgctccatctgcagtgaggtggacaccatcgaggttgtccctgtg
ccccatgtcttccgctacttcgtggctgagctggcagccatgaacataaaaacaaagctc
aacgtggagtag
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