KEGG   Lonchura striata (white-rumped munia): 110472821
Entry
110472821         CDS       T05897                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    110472821 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lsr03009]
    110472821 (WDR43)
Ribosome biogenesis [BR:lsr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    110472821 (WDR43)
SSDB
Motif
Pfam: Utp12 WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st EIF3I Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_RIG_1st Beta-prop_CAF1B_HIR1 DUF6235 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 UTP15_C WD40_like Beta-prop_SCAP
Other DBs
NCBI-GeneID: 110472821
NCBI-ProteinID: XP_021390551
UniProt: A0A218UKQ4
LinkDB
Position
3:complement(20435901..20460048)
AA seq 648 aa
MAAAPCAFSPRGCRLFASAGPDGRLRVWDTAGSRLQHEFVPSAHLSAACTCLAWAPLEAR
QPLGKDGPQRKKRKSEDGEVDKQLDILAIGTAVGSILLYSTVKGELQSKLDGGHDSRVNC
VRWHQESCCLYSCSDDRHIVEWNTQTCKVKCKWKGDNSSITCLCISPDGKMLLSAGRTIK
LWDLETKEVYRHFTGHATSVSSLIFTTVKPTNESKPFDGITGLYFLSGAIHDRLLSVWQI
RSDRKEKNAVMSFAVTDEPTFVDLSVSEVKEEPVKLAVVCKDGQLHLFEHILNGYCKKPL
TSNCTIQIATPGNDGDSTPKPVPILAAAFCTDKQSLLLVYGNALQPIIEKVSLNTSESHI
CLVRDVQKVLSLRTDAAVTKVKTPAVNSDAKVLVPGIPGHSTAVKTPALGKEKKKNKRKP
GETEESIEERLGALDIDVSKVKTPGGLPQTDSFAVLLVQGLESNDAQILNKVLNTRKENI
VKNTVARMPMHAVIPLLHELTKRLQGNPYSASLMVRWLKSVLTLHASYLSTLPDLIPQLG
MLYQLMESRVKTLQKLSRLHGRLFILVTQVAASQTVQDVPEVNQTAKLVYEDDSSEEEGS
DDEMIADKDSDENWDEDEDEQSDEQDMTVEKEINGDSDLEPENESEEE
NT seq 1947 nt   +upstreamnt  +downstreamnt
atggcggcggctccgtgcgccttctccccccgcgggtgccgcttgttcgcctcggccggg
cccgacgggaggctgcgggtgtgggacacggccggcagccgcctgcagcacgagttcgtg
ccctccgcccacctcagcgccgcctgtacctgcctggcctgggccccgctggaggcgcgg
cagcccctcgggaaggatgggccccagaggaaaaaacggaagtctgaagatggagaagtg
gacaagcagttagatatcctggctattggtacagcagttggtagcattttgttatacagc
acagtaaaaggagaattacagagcaagctagatggtggtcatgacagtagagtaaactgt
gtgagatggcatcaagagagctgctgcttgtatagctgttcagatgacagacacattgtg
gaatggaacacacagacctgcaaagtaaagtgtaagtggaaaggcgacaatagcagtatc
acctgtctatgcatcagtccagatggaaaaatgctgctgtcagctggtagaactataaaa
ctgtgggacttggagaccaaagaagtctacagacatttcacaggtcatgctacatcagtg
tcatcattaatatttaccacagtgaaacctacaaatgaaagtaaaccctttgatggaatt
acaggactttatttcttgtctggagctatacacgaccgattactgagtgtgtggcagatc
agatcagataggaaagaaaagaatgctgtgatgtcttttgcagtaacagatgaaccaact
tttgtggacctgagtgtatcagaagtcaaagaagagcctgtgaagttagcggttgtgtgc
aaagatgggcagttgcatttatttgaacatatcttgaatggttattgcaaaaaaccctta
acatcaaactgtactattcagatagcaacacctgggaatgatggggactccacaccgaaa
ccagtccctattctagcagctgcattttgcacagacaaacagtctctgctgctggtgtat
ggaaacgccttacagcccatcatagagaaagtgtctttgaacaccagtgaatcccacata
tgtttggtacgggatgtccagaaagtgttgtcacttagaacggatgctgctgtaacaaag
gtaaagacacctgctgtgaactcggatgccaaagttctagtacctggcattccaggacat
agtacagctgtcaaaactccagccttgggaaaggagaaaaagaaaaacaagaggaaacca
ggagagacagaggagagcattgaggagcgccttggggcattggatattgatgtgagcaaa
gtcaaaactcctggtggccttccccaaacagacagctttgctgtgctgctggttcagggc
ttggaaagcaacgatgcacaaatcttaaataaagtgcttaacacaaggaaagaaaatata
gtaaagaacacagtagccagaatgcctatgcatgctgtcattccactgctgcatgagctt
acaaagagattgcaaggtaacccgtacagtgcctcactaatggttcgatggctgaagtct
gttcttaccctacatgcatcctacctttccacattgccagaccttattcctcagctggga
atgttataccagttgatggagagcagagtaaaaactttgcaaaagctttcccgtctgcat
ggaagactcttcattcttgtcacccaggttgcagcatcacaaacagttcaggatgtaccc
gaggttaatcagactgcaaagttggtctatgaggatgactcctcagaggaggaaggctca
gatgatgagatgattgcagataaagattctgacgaaaactgggatgaagatgaagatgag
caatctgatgaacaagacatgactgttgaaaaggaaatcaatggtgattctgatttggaa
ccagaaaatgaaagtgaagaagagtaa

DBGET integrated database retrieval system