Lonchura striata (white-rumped munia): 110472821
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Entry
110472821 CDS
T05897
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110472821 (WDR43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsr03009
]
110472821 (WDR43)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110472821 (WDR43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp12
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_CAF1B_HIR1
DUF6235
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
UTP15_C
WD40_like
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
110472821
NCBI-ProteinID:
XP_021390551
UniProt:
A0A218UKQ4
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Position
3:complement(20435901..20460048)
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AA seq
648 aa
AA seq
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MAAAPCAFSPRGCRLFASAGPDGRLRVWDTAGSRLQHEFVPSAHLSAACTCLAWAPLEAR
QPLGKDGPQRKKRKSEDGEVDKQLDILAIGTAVGSILLYSTVKGELQSKLDGGHDSRVNC
VRWHQESCCLYSCSDDRHIVEWNTQTCKVKCKWKGDNSSITCLCISPDGKMLLSAGRTIK
LWDLETKEVYRHFTGHATSVSSLIFTTVKPTNESKPFDGITGLYFLSGAIHDRLLSVWQI
RSDRKEKNAVMSFAVTDEPTFVDLSVSEVKEEPVKLAVVCKDGQLHLFEHILNGYCKKPL
TSNCTIQIATPGNDGDSTPKPVPILAAAFCTDKQSLLLVYGNALQPIIEKVSLNTSESHI
CLVRDVQKVLSLRTDAAVTKVKTPAVNSDAKVLVPGIPGHSTAVKTPALGKEKKKNKRKP
GETEESIEERLGALDIDVSKVKTPGGLPQTDSFAVLLVQGLESNDAQILNKVLNTRKENI
VKNTVARMPMHAVIPLLHELTKRLQGNPYSASLMVRWLKSVLTLHASYLSTLPDLIPQLG
MLYQLMESRVKTLQKLSRLHGRLFILVTQVAASQTVQDVPEVNQTAKLVYEDDSSEEEGS
DDEMIADKDSDENWDEDEDEQSDEQDMTVEKEINGDSDLEPENESEEE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctccgtgcgccttctccccccgcgggtgccgcttgttcgcctcggccggg
cccgacgggaggctgcgggtgtgggacacggccggcagccgcctgcagcacgagttcgtg
ccctccgcccacctcagcgccgcctgtacctgcctggcctgggccccgctggaggcgcgg
cagcccctcgggaaggatgggccccagaggaaaaaacggaagtctgaagatggagaagtg
gacaagcagttagatatcctggctattggtacagcagttggtagcattttgttatacagc
acagtaaaaggagaattacagagcaagctagatggtggtcatgacagtagagtaaactgt
gtgagatggcatcaagagagctgctgcttgtatagctgttcagatgacagacacattgtg
gaatggaacacacagacctgcaaagtaaagtgtaagtggaaaggcgacaatagcagtatc
acctgtctatgcatcagtccagatggaaaaatgctgctgtcagctggtagaactataaaa
ctgtgggacttggagaccaaagaagtctacagacatttcacaggtcatgctacatcagtg
tcatcattaatatttaccacagtgaaacctacaaatgaaagtaaaccctttgatggaatt
acaggactttatttcttgtctggagctatacacgaccgattactgagtgtgtggcagatc
agatcagataggaaagaaaagaatgctgtgatgtcttttgcagtaacagatgaaccaact
tttgtggacctgagtgtatcagaagtcaaagaagagcctgtgaagttagcggttgtgtgc
aaagatgggcagttgcatttatttgaacatatcttgaatggttattgcaaaaaaccctta
acatcaaactgtactattcagatagcaacacctgggaatgatggggactccacaccgaaa
ccagtccctattctagcagctgcattttgcacagacaaacagtctctgctgctggtgtat
ggaaacgccttacagcccatcatagagaaagtgtctttgaacaccagtgaatcccacata
tgtttggtacgggatgtccagaaagtgttgtcacttagaacggatgctgctgtaacaaag
gtaaagacacctgctgtgaactcggatgccaaagttctagtacctggcattccaggacat
agtacagctgtcaaaactccagccttgggaaaggagaaaaagaaaaacaagaggaaacca
ggagagacagaggagagcattgaggagcgccttggggcattggatattgatgtgagcaaa
gtcaaaactcctggtggccttccccaaacagacagctttgctgtgctgctggttcagggc
ttggaaagcaacgatgcacaaatcttaaataaagtgcttaacacaaggaaagaaaatata
gtaaagaacacagtagccagaatgcctatgcatgctgtcattccactgctgcatgagctt
acaaagagattgcaaggtaacccgtacagtgcctcactaatggttcgatggctgaagtct
gttcttaccctacatgcatcctacctttccacattgccagaccttattcctcagctggga
atgttataccagttgatggagagcagagtaaaaactttgcaaaagctttcccgtctgcat
ggaagactcttcattcttgtcacccaggttgcagcatcacaaacagttcaggatgtaccc
gaggttaatcagactgcaaagttggtctatgaggatgactcctcagaggaggaaggctca
gatgatgagatgattgcagataaagattctgacgaaaactgggatgaagatgaagatgag
caatctgatgaacaagacatgactgttgaaaaggaaatcaatggtgattctgatttggaa
ccagaaaatgaaagtgaagaagagtaa
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