Lonchura striata (white-rumped munia): 110472829
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Entry
110472829 CDS
T05897
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110472829 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110472829 (PEX6)
Membrane trafficking [BR:
lsr04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
110472829 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_22
Mg_chelatase
PEX6_4th
nSTAND3
Vps4_C
RuvB_N
AAA_25
RNA_helicase
NPHP3_N
TsaE
TIP49
AAA_33
Parvo_NS1
DUF815
bpMoxR
IstB_IS21
AAA_28
AAA_24
AAA_14
Mmc1_C
Motif
Other DBs
NCBI-GeneID:
110472829
NCBI-ProteinID:
XP_031360132
UniProt:
A0A218UK88
LinkDB
All DBs
Position
3:19469756..19483710
Genome browser
AA seq
971 aa
AA seq
DB search
MAVAVLRPLDAPPAELSPATALLLAPAGLCAALRGRGGALVLAVRPAGRGGAQPVLLSAV
ALEAGGRRGAELWLRGALLRRLGLAAGRRVTVWPVRRPPALAWVLLGAAGRAGRLAGGAV
LARRGEALPGPGPGPGPLVLEARPALQGLLGTGTRTALAPPPAPPGSARGRPPPAAAPPL
VSRFAAAAAAGPRLRAVPGGAGGGGAEVWVSRRGLLALGLFQGEWVRVDAEGAAREHLAA
LLARPPPWEYPRAARRGLADGTALLAPALAFNLGCDPAAPAQLRLQRYERTGAADGKGSR
SVLSVPPFAKELQLEIVCSPAYSTRGSYDCVLYRHFETPRLVQEGDILCVPTFGNAEFIE
LNADKFLRWPELYFKVKKVIGMVEDEQSEGYLVDTQNTSVYLVGSTNSTVPSAPAYNSNE
FWSSLSPAGLSDVVKQLCDALRPHLNRRASALSGVGSVLLSGPSGSGKLLAVTAVCSCLN
LHLFKVDCVSLCSDTSAATEEKVQVAFNQAQQYQPCVLLLKDIEVLGRDRDGLGEDARVI
ATLRQLLLDTDPALSYPVLVIGTTCKPQNVPTDVQTAFLHEVKIEAPSEEQRRLMLSMLT
ASLPLGKEVSLSKLARRTAGFVLGDFCALLSHSSRAACTRIQALSFPGGLSEEVERDFCT
AGFPVLEEDFSAALDQLHDAHSQAVGAPKIPSVSWQDVGGLQEVKKEILDTIQLPLEHPE
LLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRSVF
ARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTREVFVIGATN
RPDLLDPALLRPGRFDKLVYVGISEDRESQLQVLSAVTRKFKLDPSVNLTTILEKCPAQL
TGADIYALCSDAMMCAVKRKVEWIEEGLDTEKSALILTMEDFLQAAAKLQPSVSEQELLR
YRLIQQKFAAS
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgctgcggccgctggacgcgccgccggccgagctgtcgccggccacg
gcgctgctgctggcgccggcggggctgtgcgcggcgctgcgcgggcggggcggcgcgctg
gtgctggcggtgcggccggcggggcgcggcggggcgcagccggtgctgctgagcgcggtg
gcgctggaggcgggcgggcggcgcggcgcggagctgtggctgcgcggggcgctgctgcgg
cggctggggctggcggccggccggagggtgaccgtgtggcccgtgcggcgcccgccggcg
ctcgcctgggtgctgctgggggcggcggggcgggcggggaggctggcgggcggcgcggtg
ctggcgcggcggggcgaggcgctgccggggccgggccccgggccgggcccgctggtgctg
gaggcgcgcccggcgctccaggggttgctgggcaccgggacgcgcaccgccctcgcgccg
ccgcccgccccgccgggctccgcccgcggccgcccgccgcccgccgccgcgccgcccctc
gtctcccgcttcgccgccgccgccgccgccgggccgcggctgcgggcggtgcccggcggg
gcgggcggcggcggggcggaggtgtgggtgagccggcgcgggctgctggcgctggggctg
ttccagggcgagtgggtgcgggtggacgcggagggggcggcccgcgagcacctggcggcg
ctgctggcgcggccgccgccctgggagtacccgcgggccgcccggcgcggcctggccgac
ggcaccgcgctgctggccccggccctggccttcaacctgggctgcgaccccgccgccccc
gcgcagctccgcctgcagaggtacgaaaggaccggcgccgcggatgggaagggcagccgg
tccgtgctgtctgtgcccccgttcgccaaggagctgcagctggagatcgtctgctcgccg
gcctacagcacccggggaagctacgactgcgtgctctacaggcacttcgaaacgccgcgg
ctggtccaggagggagacatcctgtgtgttccaacatttggaaatgctgagtttatagaa
ctaaatgcagacaagttcctaaggtggccagagctttatttcaaggtgaagaaggtcata
ggcatggtggaagacgagcagtccgagggttacctggtggacacccagaatacgtctgtc
tatctggtgggttcaacaaatagcactgtgccatctgccccagcctataacagcaatgag
ttctggagcagtttgtctcctgcgggactttctgatgtagtgaaacagctctgcgatgct
cttcggcctcacctgaaccgtcgggccagtgcactgagcggcgtgggcagcgttctcctc
tcggggccgagcggcagcgggaagctgctggctgtcacagctgtgtgtagctgcctcaac
ctccacctcttcaaggtcgattgcgtcagtttgtgcagtgacaccagtgcagccacagag
gagaaagtacaggtggccttcaaccaggcccagcagtaccagccctgtgtgctgctgctg
aaagacatcgaggtgcttggcagagaccgagatgggctcggggaggacgccagggtcatt
gctactctgaggcaactgctcctggacacagacccagcactgagctaccctgtcctggtg
attggcacaacctgcaagccccagaatgttcccacagatgtgcagactgctttccttcat
gaggtgaagattgaagccccttcagaggagcagaggaggttgatgctgagcatgctgact
gccagcctgcctctgggcaaagaagtgagcctgtccaagctggcccgcaggactgctgga
tttgtgctgggagacttctgtgccttgttgtcccacagcagccgggctgcttgcacccgc
atccaggccttgagttttccaggcggactgagtgaagaagtggagagggatttttgcact
gcagggttcccggtgcttgaggaggattttagtgctgcactggaccagctgcatgacgct
cactcacaggcagtgggagccccaaagatcccctcagtgtcctggcaggatgttggtggg
ctgcaggaggtgaagaaggagatcctggacactatccagttgcccttggagcacccagag
ctgctgtcgttgggtctgtgccgctctggtctgctgctgtatgggccaccagggacagga
aagaccttgctggcaaaagctgtggcaaccacatgcaccatgacattccttagcgtgaaa
gggccagagctcatcaacatgtacgttgggcagagcgaggagaatgtgcgcagtgtgttt
gccagagccagggcagctgctccctgcattatcttctttgatgaactggattccctggcc
cccagtcgtgggcgaagtggagattcagggggtgtcatggacagagttgtctcacagctc
cttgcagagcttgatggccttcattccaccagagaggtgtttgtcattggagctacgaac
aggcctgacctcttggacccagctcttctacggccaggcaggtttgacaagctggtctac
gtgggcatcagtgaggaccgggagtcgcagctgcaggtgctgagcgccgtcaccaggaag
tttaaactggatccttctgtgaatcttaccaccatcctagaaaaatgcccagctcagctg
acaggagcagacatctacgccctgtgttcagatgccatgatgtgtgctgtcaaacgcaag
gtggagtggattgaggaaggactggatactgagaagtctgctctgatcctgaccatggaa
gactttctgcaggctgctgccaagttgcagccatcagtgtctgagcaggagctgctcagg
tacagacttatccagcagaagtttgcggcctcctaa
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