Lonchura striata (white-rumped munia): 110472875
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Entry
110472875 CDS
T05897
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03013
Nucleocytoplasmic transport
lsr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110472875 (SRRM1)
03015 mRNA surveillance pathway
110472875 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110472875 (SRRM1)
03041 Spliceosome [BR:
lsr03041
]
110472875 (SRRM1)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110472875 (SRRM1)
Spliceosome [BR:
lsr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
110472875 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
110472875
NCBI-ProteinID:
XP_021390644
UniProt:
A0A218UKG7
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All DBs
Position
23:complement(6291788..6308793)
Genome browser
AA seq
897 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DVPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS
SRSRSPPKKPPKRPVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRA
RKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQY
RRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRHRHSHSRSPSPRKRQKDSSPRMQME
KRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSPPRRRSPSPPPRRRSPSPRR
YSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPTAKRRSPS
VSSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHPSSSPPPPRRGASASPQRRQSPS
PSSRPIRRVSRTPEPKKTKASTPSPRRVSSSRSASGSPETAPKKHQGPASPARSRSPSAN
WSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAVA
AAVAPADTTSAQGDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgggttcttccgcggaaccagtgcagagcaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaagtttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaaccca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctattaagtgcacaagaaaacattgctggtattcca
actgcatttctggaactgaagaaagaagaaataaaacaacggcagatagaacaggagaaa
ctggcttcaatgaagaaacaagatgaagacaaagagaagagagataaggaagacaaagac
aacagagagaaaagagacagatccaggagcccaagaagacgcaagtcccgctctccctcc
ccgcggcggcggtcgtcgcccgtgcgccgcgagcggaagcgcagccactcccgctcgccc
caccaccgcaccaagagccgcagtgccacccctgcccccgagaagaaagaggccactcct
gaaccagagccctccgtgaaaccaaaggagactgttgtgcaagaggcaacttcaaacagt
gatgtcccaaaagctcctaaacctgaaccacctgtaccagaaactaaggaaacgtcacca
gaacgtaattcaaagaaggagagagagaaggagaaggagaagactcgtcagagatcccca
actcggtccaagtccaggtcaaggtcccgatcccgttctccatctcattctcgacccaga
aggcgccatagatcacggtcaagaaggcgacccagcccgcggcgtaggccgtccccgcgc
aggaggagcccgccccggagaatgcctcccccacccaggcacaggaggagcagatccccc
gtcaggcggagaagacgttcctcggcctcgctgtccggcagcagctcctcctcgtcctcg
tcgcgctcccgctctccaccaaagaagcctcccaagagacccgtgtccagccccccccgc
aaaacgcgccggctctccccctcggccagcccgccccggcgccgccaccggccctcgccc
cccgccagccccccgcccaagccccgccgctcgcccaccccccagcagtccaaccgcgcc
cgcaagagccgcggctccgtctcgcccggcagggcttcagcacccaaacataagagtact
gagaaaagagagtctccttcgccagcgcccaaacccaggaaagcagaattgtcggaatca
gaagaagacaaaggaggcaaaatggctgcagcagattctgtccaacagagacgccagtac
aggaggcaaaatcaacagtcttcatctgattctggttcttcatcttcctcagaagaggag
aggcccaagaggtcgaacgtgaagaacggggaggtgggcaggcgccaccggcactcgcac
tcacgcagcccctcgccccgcaagcgccagaaggattcctcccctcggatgcagatggaa
aagaggtggcaatcaccagtgatgaaaagcaggaggaggaggagcccctcgccgcccccc
gcgcgccggcgccgctccccttccccggcgccgccgccccggcgccgccgctccccgtcc
ccgcctcgccgaaggtctccatcaccacccccgcgcagacgttctccctctccacggaga
tactcccccccaatccagaggcgatattccccatctccccctcccaagaggagaacagct
tctcctcctccccctcccaaaagaagggcctccccttccccgcagtccaagcgcagagtc
tcccactccccaccgccaaagcagaggagctcccctactgctaaacggcgctccccttcc
gtatcttccaagcacaggaaggggtctcctcccagcagatccaacagggaaacacgttct
ccaccacaaaacaaaaggcattcaccttcaccacggcctcgagcttcccacccctcctcc
agccctccgccgccgcgccgcggagcgtcggcatcgccgcagaggagacagtcaccctca
cccagcagcaggcccatcaggagggtgtccagaacgccagaacccaagaaaacaaaggct
tccacccccagcccccggcgcgtgtcctcgtcccgatctgcatcagggtcacctgagaca
gctcccaaaaaacaccaaggacctgcatctcctgcccgctctcgctctccttctgcaaac
tggtcacctgcaaaaaaggccaagagcccaactcagagcccatcacctgccaggaattca
gatcaagaaggtggtggcaagaagaagaagaaaaagaaggataagaagcataaaaaggat
aaaaagcacaagaaacacaaaaagcataagaaggagaaggcagctgcagctgcagtagcc
gctgctgtggctccagcagacaccacctcagcacagggagaccaggaagcagagacagaa
cccaaaaaggagacagaaagtgaacccgaggacaacctggatgacctcgaaaagcacctg
cgggagaaggccctgaggtccatgaggaaggcgcaggtgtcccccccctcctag
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