Lonchura striata (white-rumped munia): 110472938
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Entry
110472938 CDS
T05897
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110472938 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsr02000
]
110472938 (SLC6A12)
Transporters [BR:
lsr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110472938 (SLC6A12)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110472938
NCBI-ProteinID:
XP_021390748
UniProt:
A0A218V8T5
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Position
1A:complement(53533019..53571284)
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AA seq
608 aa
AA seq
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MTRAISKEGEPNGATTSPEEIQMEEMEERGQWRNKMEFVLSVAGEIIGLGNVWRFPYLCY
KNGGGAFLIPYLIFLFTCGIPLFFLETALGQFTSQGGVTAWRKICPIFEGIGYASQVIVG
YLNIYYIVILSWALFYLFSSFTSVLPWANCNNPWNSDLCVDILNRSSLDNRTLPSNATSS
MIEFWEKRVLGLTDGIHKLGTVRWELALCLLLAWIVCYFCIWKGVKSTGKVVYFTATFPY
VMLFILLVRGVMLPGAAEGIIFYLKPDMSRLADPQVWMDAGTQILFSYAICEGCLTALGS
YNKYTNNCYRDCIMLCSLNSATSFVAGFAIFSVLGFMAREQGVPISEVAESGPGLAFIAY
PTAVTMMPVSQLWSCLFFLMLIFLGLDSQFVCVESMVTAIIDMFPGVFRKKGRRELLILA
IAVISYLLGLLLVTEGGMYIFQLFDYYAASGTCLLFLAVFEVICIGWVYGANRFYDNIED
MIGFRPWPLIKICWLVFTPGLCMGVFLFSLIKYTPLKYNNSYEYPSWGYVLGWLMALSSM
VCIPLYAIFILLKTKGSLKQRLMQLISPAEDLPQPKKKHMAGPSDLRREGWSPPAQELLS
ITERETHF
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgacaagagccatatctaaggaaggagaacccaatggggccaccacatctcctgaagag
atacaaatggaggaaatggaagagagaggccagtggcggaacaaaatggaatttgtgctg
tctgtggctggggagatcattggcctgggtaacgtgtggaggttcccatacctctgctac
aagaatggtggtggagccttcctcatcccttacctcatcttcctcttcacctgcgggatc
cccctgttcttcctagagacagcgctggggcagttcacgagccagggaggggtgactgct
tggaggaagatctgtcccatctttgaaggaattggatatgcttcccaagtcattgtggga
tatctgaatatctactacattgtcatcttgtcctgggcactcttctacctgttcagctcc
ttcacttcagtgctaccatgggccaactgcaataacccctggaactcagatctctgtgtg
gacattctgaatagatccagcctggacaacaggaccttgccttcgaatgccacgtcctca
atgattgagttttgggagaagcgagtcctggggctcacggatggtattcacaaactgggc
actgtgcgctgggagctggctctgtgtcttctgctggcatggatcgtctgctacttctgc
atctggaaaggggtcaagtccacaggcaaagtcgtttacttcactgccaccttcccatat
gtgatgctcttcatcctgctggttcgaggggtgatgctgccgggggctgctgaggggatc
attttctacctgaagccagacatgtccaggctggcagacccacaggtctggatggatgca
ggcactcaaatcctcttctcttacgccatctgtgaggggtgcctgacagctctgggcagc
tacaacaaatacaccaataactgttacagggactgcatcatgctctgctccctgaacagt
gccaccagctttgttgctggctttgccattttctctgtgctgggcttcatggctcgagag
cagggcgtacctatttcagaagtggccgaatcaggtcctggcctggctttcatagcatat
ccaacagcagtaacaatgatgcctgtgtctcaactctggtcctgcctcttcttcctcatg
ctgatcttcttgggactggacagccagtttgtctgtgtggaaagcatggtgacagctatt
attgacatgttcccaggagtgtttcggaagaaggggcgtcgggagctgctgattctggcc
attgcagtcataagctacttgctgggcttattgctagtcactgagggtggcatgtacatc
ttccagctctttgactactatgctgccagtggcacatgcctgctcttcctggctgttttt
gaagtaatctgcatcggatgggtgtatggtgccaaccgtttctatgacaacattgaagac
atgattggtttccggccgtggcccttgatcaagatatgctggctggtgttcaccccgggt
ctgtgcatgggtgtcttcctgttttccctgatcaagtacacacccttgaaatacaacaat
tcctacgagtacccatcctggggctacgtgctaggctggctgatggcactctcctccatg
gtctgtattcctctctatgccatcttcatcctcctgaaaaccaaaggatcactgaaacag
cgactgatgcagctgatttccccagcggaggatctaccacagccaaagaagaagcacatg
gcagggccatccgatctgaggcgtgagggatggtctcctccagcccaggagctgctcagc
atcacagagagagaaacccacttctaa
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