Lonchura striata (white-rumped munia): 110473001
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Entry
110473001 CDS
T05897
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110473001 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110473001 (NUP93)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110473001 (NUP93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
RP854
Motif
Other DBs
NCBI-GeneID:
110473001
NCBI-ProteinID:
XP_021390885
UniProt:
A0A218UJY1
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Position
11:complement(8332731..8411302)
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AA seq
819 aa
AA seq
DB search
MDTDGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKA
SVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRRR
TFAMAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQENEPSYVGEVGPPGRSSMDS
VEMAYARQIYIYNEKIVNGHLQPNLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASD
ALKVRTNMEVRMEFVRHALHYLEESYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIK
LPASVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKD
RRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQ
VCFDDGGASSPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLF
RTERLRCHAVHVALVLFELKLLLKASGQSAQLLSHEAGDPPGVRRLNFVRLLMLYTRKFE
STDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDK
FTSDTKSIINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNK
ERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHVDRAFDIIERLKLV
PLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMED
RDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacacggatggctttggagagctgctgcagcaggctgagcagctggcggctgagaca
gaggggatctcggagctcccgcacgtggagcgcaacctgcaggagatccagcaggccggg
gagcgcctgcgctcccgcaccctgacccgcacctcccaggagactgccgatgtcaaggca
tcggttcttcttgggtctagagggcttgatatatcccacatttctcagagacttgagagt
ctaagtgcagccactacatttgagcctcttgaacctgtgaaggacactgacatccaggga
ttcctgaagaatgaaaaagataatgcattgctatctgccattgaagagtctaggaggagg
acttttgccatggctgaggagtatcaccgggaatcaatgctggttgaatgggagcaggtg
aaacaaagaattcttcattctctgcttgcgtcaggagaagatgctcttgatttcacccag
gaaaatgagcccagctatgttggtgaggtgggtcctccaggtcgcagctccatggacagt
gtggagatggcatatgctcgtcagatttatatttataatgagaagatagtgaatggacat
ctgcagcctaacctggtggacctctgtgctgctactgcaggcctggatgataagaacatc
tctgagatgtgggccatggtgaaacaaatgaccgatgtcaccctggttcctgccagcgat
gccctgaaagtccggaccaacatggaggtgcgcatggagtttgtgaggcacgctctgcac
tacctggaggagagttacaaaaattacacttttgtgacagtctttggaaacttgcaccag
gctcagctgggtggagtcccaggcacctaccagctggtccgaagcttcctgaacatcaaa
ctcccggcgtctgtccctggtctgcaggatggtgaggtggagggccatcctgtgtgggca
ctgatttactactgcatgcgctgtggagatctgactgcagccatgcacgtggtgaaacgg
gcacagcaccagctgggagagttcaaaacctggttccaggagtacatgcacagtaaagac
agaagactgtctcctgccacagaaaataaactgcgtcttcattacagacgagctctgaga
aataacactgacccctacaaaagggctgtttattgtattattggccgttgtgacattaca
gacaaccagagtgaagttgctgataaaacagaagattatctttggctaaaactgaaccaa
gtgtgttttgatgatggtggtgcgagctccccgcaggaccggctaacgttatcccagttc
cagaagcagctgctggaagactatggtgaatcacactttgcagtgaaccagccaccattc
ctctacttccaagtgttgtttttgacagcacagtttgaagctgcaattgcttttcttttc
cggacagagcgcttgcgctgtcacgctgttcatgttgctttggtcctgtttgagttaaaa
ttgctcctgaaagcatctgggcagagtgcacaactattaagccatgaagctggtgaccct
cctggtgtcagacgtttaaattttgtgcggcttttgatgctttacactcgtaagtttgaa
tcaacagatccacgggaagctctgcagtacttttactttctcaggaatgagaaggacagc
caaggagagaatatgttcttgcgttgcgttagtgaaatagtgattgaaagcagagagttt
gatatgattcttggaaagctggaaaaggatggtagtaggaagcctggagtgatagacaag
tttacaagtgacacaaaatccattattaacaaagtggcttctgcagcagaaaataaagga
ttgtttgaagaagctgcaaaactctatgaccttgcaaagaaccctgacaaagttttagaa
ctgatgaacaagctccttagtccagttgttccccagatcagcactccccagtcaaacaag
gagcgtttgaagaacatggcccattccattgctgagaggtacaaagcgcaggggataagt
gcaaagaaatccattgactccacgttctaccttctgctagacttaatcacgttttttgat
gaatatcacgctggtcacgttgacagggcctttgatattattgaacgcctgaagcttgta
cctcttagccaagattgtgtcaaggagagggtcgctgccttccggaatttcagcgatgaa
atcaaacacaatttatctgaggtcctgcttgcaaccatgaatattttattcaccaagtat
aagaggatgaaaggcacaagcccaaccactcctgccaggccccagcgggtaatggaagac
agagattcgcaacttcagtctcaagctcgggcactgataatgtttgctgggatgatccca
tacagaacatcaggagacacgaatgcaagactggtgcaaatggagatccttatgaattag
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