Lonchura striata (white-rumped munia): 110473085
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Entry
110473085 CDS
T05897
Name
(RefSeq) bile acid receptor
KO
K08538
farnesoid X receptor beta
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110473085
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lsr03310
]
110473085
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110473085
Nuclear receptors [BR:
lsr03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
110473085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110473085
NCBI-ProteinID:
XP_031362820
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Position
26:complement(6299922..6311301)
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AA seq
507 aa
AA seq
DB search
MKQCSWEQSMANTFVTVPDGYGLPEPIQYYDVLPEHINYQLQDTDFQAAPYCQYSAVPVP
ALPPQPGPAPYGSYSLEPPYDGPCVGSSCELSKGPFLAPHGEDGGYQGLKRPRLNHSVRL
KGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYRCKSGGHCEMDMYMRRKCQ
ECRLKKCRAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLCNIKLEDEGLNSKQVSSTTRS
GKVPEKMELTPGEHQLLDHIVAAHQKYTIPLEEARKFLQETASPEESFLHLSETAVVHVQ
VLVDFTKRLPGFESLASEDQIALLKGSTVEAMFLRSAQIYNQRMSECQPSTSESHVRLSD
HGTCCHVQNLDKNNIYSMEMCHNKERPTSTTTTGITEEFITALFYFYRTMGELKVTETEY
ALLVATTVFFSDRPLLRDKRHVEELQEPLLGILYKHSKLQHPRDPQRFARLLGRLTELRS
LRHAHAGALRARDPRLAAPLRDLWDLH
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtgcagctgggagcagagcatggccaacacgtttgtcaccgtccctgatggg
tacggccttcccgagcccattcagtactacgatgttttaccggagcacatcaactaccag
ctgcaggacacggatttccaggctgccccgtactgccagtactcagcagtgccagtgcca
gccctgccgccccagcccggcccggccccgtacggctcctacagcctggagccgccgtat
gatgggccctgcgtgggcagcagctgcgagctcagcaagggccccttcctggctccccac
ggcgaggatggggggtaccaggggctcaagaggcccaggttaaaccactcggtgaggctg
aaggggcaggaggagctgtgcgtggtgtgtggggacaaggcctcggggtaccactacaac
gccctgacctgcgagggctgcaaaggcttcttccggcgcagcatcaccaagaacgccgtg
taccgctgcaagagcggggggcactgcgagatggacatgtacatgaggaggaagtgccag
gagtgccgcctcaagaagtgcagagctgtgggaatgctggcagaatgtttgctgactgaa
gtccagtgcaagtcaaaacgactcaggaagaatttcaagcagaagagcagtttcctttgc
aatataaagctggaagatgagggactgaatagtaagcaagtatcatctacaacaagatct
ggaaaagtcccagagaagatggaacttactccaggagaacatcagcttcttgaccacatc
gtagcagcacaccaaaaatacacaattcctcttgaggaagccaggaagtttctacaggaa
actgcaagtcctgaggaaagtttcctccacctgtctgagacagccgttgtccatgtccag
gtgttggtggatttcacaaaaagactcccagggtttgagagtttagccagtgaggaccag
attgctctgctgaaagggtccacagtggaggcgatgttcttgagatcagcccaaatttac
aaccaaagaatgagcgagtgccagccatcaaccagtgaaagtcatgtaagactttctgat
cacgggacatgttgtcatgttcaaaaccttgataaaaacaatatttattccatggaaatg
tgtcataataaagagagaccaacttctactactaccacaggcataactgaggagttcatc
accgccctgttctacttctacagaaccatgggggaactcaaagtgaccgagaccgaatac
gctctgctcgtagcaacaacagtgttcttttcagaccgcccgctgctgagggacaagcgc
cacgtggaggagctgcaggagccgctgctggggatcctgtacaagcactcgaagctgcag
cacccgcgggacccgcagcgcttcgcgcggctgctggggcgcctcacggagctgcgctcg
ctccgccacgcccacgcgggggcgctgcgcgcgcgggacccgcgcctggccgcgccgctg
cgcgacctctgggacctccactag
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