Lonchura striata (white-rumped munia): 110473086
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Entry
110473086 CDS
T05897
Symbol
TRIM33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsr01001
]
110473086 (TRIM33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110473086 (TRIM33)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110473086 (TRIM33)
Protein kinases [BR:
lsr01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
110473086 (TRIM33)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110473086 (TRIM33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
110473086
NCBI-ProteinID:
XP_031362805
LinkDB
All DBs
Position
26:6407383..6447900
Genome browser
AA seq
1085 aa
AA seq
DB search
MAENKGGGGGGDAAAEAAPGGGGGLEPPAGSPSAAAPPEERESPGAAAAERGGGEAEAEA
AAGPGAAAGPGPSPVPPLTPAAPGPFSLLDTCAVCAQSLQSRREAEPKLLPCLHSFCRRC
LPEPERQLTVPVPGGANGDVQQVGVIRCPICRQECRQIDLVDNYFVKDTSESPSSSDEKS
EQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHMIRKKEDVSSEAVGASGQR
PVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLE
KKNYVNFAAAQVQNRIKEVHETNKRVEQEIKVAIFTLINEINKKGKSLLQHLENVTKERQ
MKLIQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLRHILKARCDPVPA
ANGAIRFHCDPTFWAKNVVNLGNLVIENKPTPSYTPNVVVGQTPPGTNHVSKTPGQINLA
QLRLQHMQQQVYAQKHQQLQQMRMAQPSSASVPRQSSPQVLQQQPPRLISMQTMQRGNMN
CGAFQAHQMRMAQNAARIPGIPRHNGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNTTIN
PTSPTTATMASANRGPTSPSVSAIELIPSVTNPENLPSLPDIPPIQLEDAGSSSLDNLLS
RYITGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTA
DKTGIGFKADQVKVKQEPGTEEEICSFSGTVKQEKTEDGRRSACMLSSPESSLTPPLSTN
LHLESELEAFGSLENHVKTEPGDLSESCKQSGHSLVNGKSPVRSLMHRSARAAGEGNNKD
DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFCRDLSKPEVEYD
CDNSQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMD
LSTVKKKLQKKHSQHYQTPEDFVADVRLIFKNCERFNEMMKVVQVYAETQEINLKADSEV
AQAGKAVALYFEDKLTEIYSDRTFQPLPEFEQEEDDGEITEDSDEDFIQPRRKRLKSDER
PVHIK
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacaaaggaggcggcggcggcggggacgcggccgccgaggccgcgccgggc
ggcggcggcggcctggagcctcccgccggctcgccgtccgccgccgcgccgcccgaggag
cgcgagagccccggggcggcggcggcggagcgcggcggcggcgaggccgaggccgaggcg
gcggcggggcccggtgcggcggcggggcccggccccagcccggtgccgccgctgacgccc
gcggcgccggggccgttctcgctgctggacacgtgcgcggtgtgcgcgcagagcctgcag
agccggcgggaggccgagcccaagctgctgccctgcctgcactccttctgccgccgctgc
ctgcccgagcccgagcgccagctcaccgtgcccgtgcccggcggcgccaacggcgacgtg
cagcaagtgggggtgatccggtgccccatctgccgccaggagtgccggcagatcgacctg
gtggacaattacttcgtgaaggacacctcggagagccccagcagctccgacgagaagtcc
gagcaggtgtgtaccagctgtgaggacaacgccagcgccgtgggtttctgtgtggagtgt
ggggagtggctgtgcaagacctgcatcgaggcccaccagcgagtaaagtttactaaggac
cacatgatcaggaaaaaagaggatgtgtcctcagaggccgtgggagcatctggtcaacgt
cctgttttctgccctgtccacaaacaagagcagttaaaacttttctgtgaaacctgtgac
aggctgacgtgcagagactgtcagttactggaacacaaagaacacaggtaccaattcctg
gaagaagcttttcagaaccagaagggtgcaattgagaacctgttggccaaacttcttgag
aagaagaattatgtaaattttgcagctgcccaagttcaaaataggataaaagaagtacat
gaaaccaacaaacgagtagagcaggaaatcaaagtggctatattcaccctcatcaatgaa
atcaataaaaagggaaaatctctcctacaacaccttgagaacgtgacaaaggagagacag
atgaagctgatccagcagcagaacgacatcactggtctgtcacgacaagtgaagcatgtg
atgaacttcactaattgggccatcgccagcggcagcagcactgccctgctctacagcaag
cgcctgataacgttccagctgaggcacatcctgaaggcacgctgcgatcccgtccccgct
gccaacggggccatccgcttccactgtgaccccaccttctgggctaagaacgttgtcaat
ttgggtaacctggtcattgaaaataaaccaacccctagttacactcccaatgtagtggtt
gggcagactccaccaggaacaaaccacgtcagcaaaactccaggacaaatcaatctggcc
cagcttcgactgcagcacatgcagcagcaagtgtatgcccaaaagcaccagcagctgcag
cagatgaggatggcccagccatcctctgcatccgtgcccaggcagagcagcccccaagtc
ctgcagcagcagcctcccaggttgatcagcatgcagaccatgcagaggggtaacatgaac
tgtggggctttccaagcacatcagatgagaatggctcagaatgctgctcgtataccagga
atcccacgccacaatggacctcaatactccatgatgcaacctcaccttcaaagacaacac
tccaaccccggccacgccgggcccttcccggtggtctccgtgcacaacaccaccatcaac
cccaccagccccaccacggccaccatggccagcgccaaccgtggccccaccagcccgtcc
gtgtcggccatcgagctcatcccgtccgtcaccaacccggagaacctgccctccctgcca
gacatcccccccatccagctggaagatgctggttccagtagtttagataatctgctaagt
cgatacatcacaggcagccacctccccccacagcctacaagcaccatgaatccctcccca
ggaccttcagctttgtctccagggtcatcaggtttatccaactcccacactcctgtgagg
ccccccagcacctccagcacaggcagcagaggaagctgtggctcctcgggcaggactgct
gacaaaactggcattggcttcaaggctgaccaagtgaaagtaaagcaagagccaggcaca
gaggaagagatctgcagtttctcaggaacagtaaagcaggaaaaaacagaggatggcaga
aggagtgcttgcatgctcagcagccccgagagcagcttgacaccaccactgtccactaac
ttacacctggagagtgaactggaagcttttggaagcctggaaaaccacgtgaagacagag
ccaggagatctgagcgagagctgcaagcagtctgggcacagcctggtgaacgggaaatcg
cccgtgcggagcctcatgcaccgctcggcccgagcagcaggagagggcaacaacaaggat
gacgaccccaacgaggactggtgtgctgtgtgccagaatgggggggacctgctgtgctgt
gagaagtgccccaaggtgttccacctcacctgccacgtccccacgctcctcagcttcccc
agtggagagtggatatgtacattctgcagagacctgagcaaacctgaagtggaatatgat
tgtgacaattcccagcacagcaagaagggcaagacagcacaaggcctgagtcccgtggac
caaaggaaatgtgaacgccttctgctttacctgtactgccacgagctgagcattgagttc
caagagccagtcccagcctcgataccaaactactataaaatcataaagaaaccaatggat
ttatccacggtgaagaagaaactgcagaagaagcattcccaacactaccagacccccgag
gacttcgtggctgatgtccgattgatcttcaagaactgtgaaaggtttaatgaaatgatg
aaagttgttcaagtttatgcagaaacacaagagattaatttgaaggctgattcagaagta
gcacaggcagggaaggcagttgcattgtactttgaagataaacttacagagatctactca
gacaggaccttccagcctttgcctgaatttgagcaggaagaggatgatggtgaaataact
gaggactccgatgaagattttatacaaccacgtagaaaacgcctaaaatcagatgagaga
ccagtgcatataaagtaa
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