Lonchura striata (white-rumped munia): 110473128
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Entry
110473128 CDS
T05897
Symbol
MBD5
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110473128 (MBD5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110473128 (MBD5)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
110473128 (MBD5)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
110473128 (MBD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
110473128
NCBI-ProteinID:
XP_031361316
LinkDB
All DBs
Position
7:36167967..36299279
Genome browser
AA seq
1717 aa
AA seq
DB search
MNGGKECDGGDTDGGPPAVQVPVGWQRRVDQSGVLYISPSGSLLSCLEQVKSYLLTDGTC
KCGLECPLVLPKVFNFDPGAAVKQRTAEDVKADEDVTKLCIHKRKIIAVATLHKSMEAPH
PSLVLTSPGGGTSATPVVPTRAATPRSMRNKSHEGITNSVMPECKTPFKLMMGASNAMGR
LYVQEMAGSQQAELHPAYPRQRLGSNELGQKSPYRGSHGGMPSPASSGSQIYGDGSISPR
TDPLGSPDVFTRNNPSFHGAPNSSPIHMTRTPLSPPSVMLHGSPIQSSCAMAGRTNIPLS
PTLTTKSPVMKKPVCNFSAGMEIPRAMFHHKPPQGPPPPPPPPSCALQKKPLTSEKDPLG
ILDPIPSKPVNQNPVIMNPTTFHSSVHSQVPVMNVSMPPAVVPLPSNLPLPTVKPAHINH
GAHVQRVQHSASTSLSPSPVTSPVHVMAPGIGRIEASPQRSRSSSTSSDHGNFLLPPVGP
QSSCSGIKVPPRSPRSTIGSPRPSMPSSPSTKHDGLSQYKDIPNPLIAGMSNVLNPPNNA
VFPAASAGSGSLKSQPGLLGMPLNQILNQHNAASFPASSLLSAAAKAQLANQNKLAGNNN
NSSSNSGPVASGGSTEGHSTLNPMFPPAANVLLPTTEGQSGRAALRDKLMSQQKDPLRKR
KQPTATVLSLLRQSQLDSSGLPKAGSDLIRKPSQSSFPISSMSQLLQSMSCQSSHGSSNS
SSGCGSSSSALPCPGAQLHLAEPALGAPGGVAPGLPLRGEGLPCPNPNPAFGPAAGPPPS
NHLAGLLNQMQASGGCGMLPQAGMALGNSLHASPAQARLQAPSTPGIPNSIGSSCNQTSP
EAGGLGPSSSIAIAGTSQAAITKTTSVLQDGVIVTTAAGTPLQQGQLPMGGEFPFAGHDH
SLHFPQNSSSNNNLPHPLNQNLLSSLPLSLPVNQQHLLNQNLLNILQPSAGEGKSEVNLN
PLGFLNPNVNAALAFLSGDVDGQVLQPVHFQLLAALLQNQAQAAAMLPVPSFNVTISDLL
QQQNAPAPPEPLPEGGRVENLLPAAVPGFPGADPAANPLLLPAAPGASALMALNPQLVGG
VLSSGSHPEVAIATSSQATTTTTTTSSAVAALSVSALAGSTAVVSMAETLLNISGGAPGP
AKLNNSSVVPQLLNPLLGTGLLGEMSSLNTTLNNHQLSHLQSLLSNNQMFPSNQQQQQQQ
QQHLLQGYQNVQGFQGQPQIPGPANNPNPMACLFQNFQVRMQEDAAVLNKRMITQMGMAP
VPESSNTLLPPFQEPPCDLQQRPDPSLGQQAKDNPNAAAAGDASVDAIYKAVVDAASKGV
PVVITTAGSSAAQPSPIPALSAMSAFTASIGDPLNLSSAVSAVAHGRGAEHEGRGRGGRG
ARGPKSAEHGKNPGEGDGYEYYKPTACNTPKKQWEGEQSPGGEINRWKCEEFLEHSAHVH
SSPCHERPNNVSALPLLQAEQHQALLAQRNCQSEKMLEENFRYNNYKRTMMSFKERLENT
VERCAHINGNRPQPNRAFGELLNTSKQDLILEEQSPSSSNSLESSLVKDYIHYNGDFNAK
SINGCVPSPSDAKSISSEEDLRNPESPSSHELIHYRPRTFNVGDLVWGQIKGLTSWPGKL
GREEEVHNSCQQNAEEGKVEPEKLKTLTEGLEAFSRARKRNRKSGKLNNHLEAAIHEAMS
ELDKMSGNVSSFSLGIFSFSMFLHVCPLEGGLVWMAF
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgggaaggagtgtgacggaggggacacggatggagggccaccagcagtgcaa
gttcccgttggttggcagcggagggtggaccaaagtggagttctctacatcagtcccagt
gggtctttattatcctgcttggagcaggtgaagtcttacttgctgactgatggaacgtgc
aagtgtggcctagaatgtcctcttgttcttcccaaggtctttaattttgatcctggagct
gctgtgaagcagagaactgctgaagatgttaaagcggacgaagatgtcaccaaactatgc
attcacaaaaggaaaattattgctgtggctacacttcataaaagcatggaagcaccacat
ccttcactggttctaactagtcctggtggtggaacaagtgcaacgccggtagttcccact
cgagcagcaactccaaggtcgatgaggaataaatcacatgaaggaattacaaattctgtg
atgccggaatgtaagactcctttcaagttgatgatgggggcatctaatgccatgggtagg
ctttatgtgcaagaaatggctggaagccagcaagcagagctccatcctgcctatcccagg
cagagattggggagcaatgaactggggcagaagtctccgtaccgcggcagtcacgggggg
atgcccagcccggcgtcctcgggatcgcagatctacggggacggctccatctcccccagg
actgacccgctcggaagccccgacgtcttcacgaggaacaatcccagttttcacggagcg
cccaactccagtcctatccacatgaccaggacgcctctgtccccgccgtcagtcatgctc
cacggctctcccatacagtcatcctgtgcaatggctggaaggactaatatacctctttcc
cccaccctgaccaccaagagcccagtcatgaaaaaacccgtgtgtaacttttcggctggt
atggaaataccacgagcaatgttccaccataaacccccccaaggcccacccccacctcct
cctccgccttcttgtgctcttcagaaaaagccattaacatccgagaaggatccgcttggc
atactggacccaattcccagcaaaccggtgaaccagaaccccgtgatcatgaaccccacc
actttccactccagtgtccactctcaggtacccgtgatgaatgtaagcatgccccccgcc
gtggtgcccctgcccagcaacctgcccctgcccaccgtcaaacccgcccacatcaaccat
ggcgctcacgtccaaagggttcagcactcggcttccacgtccctgtccccctcgccggtg
acgtcccccgttcacgtgatggcgcccggcatcggaaggatcgaggcttctccccaaaga
tcacgttcttcttccacctcgtccgaccacggaaacttcctgctgcctccagtagggccg
cagtcgtcctgtagcggtatcaaagtccctcccaggtccccgaggtcaaccatagggtca
ccgaggccatccatgccatccagcccttccaccaagcacgacggactcagtcaatacaag
gacatccctaacccgttaattgctggaatgagtaatgtgttaaatcctcccaacaatgca
gtttttcccgctgcatcggccggaagcggttccttgaagagtcagcctggtttgctggga
atgcctttaaatcagatcttgaaccagcacaacgctgcctcttttccagcgagcagttta
ctctcagcagcagccaaagcacagctagcaaatcaaaataaacttgctggtaacaacaat
aacagcagtagcaattccggacctgttgccagcggcggcagcaccgaaggacacagcact
ttaaatcccatgttccctcctgctgccaacgtgctcctccccaccacggaagggcagagc
ggccgggcggcgctgagagataaactgatgtctcagcaaaaggatcctctgaggaaaagg
aagcagcccaccgccacggtgctgagcttgctgagacagtctcagctggacagctctggg
cttcccaaagctgggtctgatttgataagaaagccaagtcaaagctccttccccatcagc
tccatgtcgcagctcctgcagtccatgagttgtcagagctcccacgggagcagcaatagt
tcctcgggctgcgggagctccagcagcgccctgccctgccccggcgcccagctgcacctg
gcagagcccgcgctgggcgcgcccggcggcgtggccccggggctgcccctgcgtggggag
gggctgccctgccccaaccccaaccccgccttcggccccgccgctggcccgcccccctcc
aaccacctggccgggctcctcaaccagatgcaggccagcgggggctgcgggatgctcccc
caggcaggaatggccttggggaactccctacacgccagcccggctcaggccaggctccag
gcaccctccacgccgggcatccccaacagcatcgggagcagctgcaaccagaccagccct
gaagcagggggtttgggcccgtcgtcatcgatagccatcgccggcaccagccaagctgcc
atcaccaagaccacgtctgtgctccaggacggcgtcattgtcaccactgcagctgggacc
cctctgcagcagggccagctgcccatggggggcgagttccccttcgccggccacgaccac
tcgctccacttcccgcagaacagctcttcaaacaacaatctgccacatcctctgaatcaa
aacctcctcagttccctgcctctctctctgccggtgaatcagcaacatctcctaaaccag
aacctcctgaacatcctccagccttcggcaggagaaggcaagtctgaggtgaacctcaac
cctttgggtttcctgaaccccaacgtcaatgctgctttagcgttcctctcgggcgacgtg
gacgggcaggttctgcagcccgtgcacttccagctgctggcagccctgctccagaaccag
gcccaggcagccgccatgctccccgtgccatccttcaacgtcaccatctccgacctgctg
cagcagcagaacgcccccgcgccccccgagccgctgcccgagggcggcagggtggagaac
ctgctgcccgccgccgtgcccggcttcccgggcgccgaccccgccgccaaccccctgctc
ctgcccgccgcccccggcgcctcggcgctcatggccctgaacccgcagctggtggggggc
gtcctgagctcgggaagccaccccgaggtggccatcgccacctcctcgcaggccaccacc
accaccaccaccacgtcgtcggcggtggccgcgctgtcggtgtcggcgctggccgggagc
acggccgtggtgtccatggcggagacgctcctcaacatctccggcggcgcgccgggaccc
gccaagctcaacaacagctccgtggtgccgcagctcctgaacccgctgctgggcacgggc
ctgctgggggaaatgtcatctctgaacactactctgaacaaccatcagctcagccacctc
cagtcactcctcagcaacaatcagatgtttccttcaaatcagcagcagcagcagcagcag
cagcagcaccttctccagggctaccagaacgtgcagggctttcaaggccagccccaaatt
cctggcccagccaacaacccaaaccccatggcgtgtctgttccagaatttccaggtgagg
atgcaggaagacgccgccgtcctcaacaaaagaatgatcacccagatgggaatggcgccg
gttcccgagagctccaacactctcctccctcccttccaggagcccccctgcgacctgcag
cagagacctgacccatccctgggccagcaggccaaggacaaccccaacgccgccgccgcg
ggcgacgcctcggtggacgccatctacaaggcggtggtggacgccgccagcaagggggtg
ccggtggtgatcaccacggccggctccagcgccgcgcagccgagccccatccccgccctg
agtgccatgagtgccttcacagcctccatcggggaccccctgaacctgtccagcgccgtc
agcgccgtcgcccacggccgcggcgccgagcacgaggggcgcgggcgcggcgggcgcggc
gcgcggggcccgaagagcgcggagcacggcaagaaccccggcgagggggacggctacgag
tattacaaaccgaccgcttgtaacacgcccaaaaagcagtgggaaggggagcagagcccc
gggggggagatcaacaggtggaaatgcgaggagttcctggagcactccgcccacgtccac
agcagcccgtgccacgagcggcccaacaacgtctcggcgctgccgctgctgcaggcggag
cagcaccaggccctgctggcccagcggaactgtcagagcgagaaaatgctggaggagaat
ttcaggtataacaattacaaaagaactatgatgagtttcaaggaaagactggagaacact
gtggaacgatgtgcacacatcaacgggaaccgcccgcagcccaacagggccttcggggag
ttgctcaacacttccaaacaagacctgatcctggaagagcaatctcccagttcctccaat
agcttggagagttccttagtgaaagactacatccattacaatggagattttaatgccaaa
agcattaacgggtgcgtgcccagcccctcggatgctaagagcatcagcagcgaggaggac
ctgcggaaccccgagtcgccctcgtcccacgagctcatccactacaggccgaggacgttt
aacgtgggcgacttggtctggggccagatcaaaggactgacttcctggcctggcaagctt
ggcagagaagaagaggttcacaactcatgccaacagaacgctgaggaggggaaggtggag
ccggagaagctgaagacactaacggaggggctggaggcgttcagccgcgccaggaaaagg
aacaggaaaagtggaaagctaaataaccatttagaagctgctatacacgaggccatgagt
gaactagacaaaatgtctgggaatgtaagttccttttccttgggaatattctccttttcc
atgtttctgcatgtgtgtccattggagggaggcttggtttggatggctttctaa
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integrated database retrieval system
