Lonchura striata (white-rumped munia): 110473165
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Entry
110473165 CDS
T05897
Symbol
PTPRT
Name
(RefSeq) receptor-type tyrosine-protein phosphatase T isoform X1
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsr01009
]
110473165 (PTPRT)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
110473165 (PTPRT)
Protein phosphatases and associated proteins [BR:
lsr01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
110473165 (PTPRT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
PTPlike_phytase
Y_phosphatase3
Pur_ac_phosph_N
TM_ErbB1
PTP_tm
ig
Ig_3
PTP-NADK
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
110473165
NCBI-ProteinID:
XP_021391144
LinkDB
All DBs
Position
20:11408476..11876108
Genome browser
AA seq
1488 aa
AA seq
DB search
MTGVAAIVFFLQLLPRADGQVFPGGCSFDEHYSNCGYSVALGTNGFTWEQINTWEKPTMD
PAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYLSSRDRSSPGSLNVYVKV
NGGPQGNPIWNVSGVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVDEVRVLA
HPCRKAPHFLRLQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHR
RFSATVSVADTSQRSISKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLW
IKPNANSIIGDGPIILKEVEYRTTTGNWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPG
EGGTGPPGPPLTTRTKCADPVHGPQNVEVVDIRSRQLTLQWEPFGYAVTRCHSYNLTVHY
QYVFNQQKFEAEELIQTSSHYTLRGLRPFMTIRLRLALSNPEGKMESEELVVQTEEDVPG
PVPLESIQGGPFEEKIYVQWKPPNETNGIITLYEITYKAVGSLDPSADLSSQRGKVFKLR
NETHHLFVGLYPGTTYSFTIKASTVKGFGPPITTRIATKISAPSMPEYDTDSPLNETDTT
ITVMLKPAQSRGAPVSVYQLVVKEEKLQKARRAADIIECFSVPVSYKNASSLDSPHYFAA
ELKPINLPVTQPFTVGDNKTYNGYWNAPLSPLKSYSIYFQALSKANGETKINCVRLATKG
ASTQNSNAVEPEKQVDSTVKMAGVIAGLLMFVIILLGAMLTIKRRRNAYSYSYYLHSSQC
FRGLSVFYRTRKLAKKQKETQTSTQREMGPVATSDKTSTKLSAVHNEEAFSSSCQDVNGF
TSPSPCSFSVQSKTLQSKSMLNSYYSVSSDTVPSTTLLDSSHGELAQPTLTIQTHPYRSC
EPVEMSYPRGQFQPAIRVADLLQHITQMKRGQGYGFKEEYEALPEGQTASWDTAKEDENR
NKNRYGNIISYDHSRVRLQLLDGDPHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWR
MIWQENSASVVMVTNLVEVGRVKCVRYWPDDTEVYGDIKVTLIETEPLAEYVIRTFTVQK
KGYHEIREIRQFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGC
FIAIDIMLDMAENEGVVDIFNCVRELRSQRVNLVQTEEQYVFVHDAILEACLCGNTAIPV
CEFRSIYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSIGLLPRNHDKNRCMDVLP
LDRCLPFLISVDGESSNYINAALMDSHKQPAAFIVTQHPLPNTITDFWRLVFDYNCSSVV
MLNEMDAAQLCMQYWPEKTSCCYGPIQVEFVSADIDEDIINRIFRICNMARPQDGYRIVQ
HLQYIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGRDGRTVVHCLNGGGRSGTFCAICS
VCEMIQQQNIIDVFHIVKTLRNNKSNMVESLEQYKFVYEVALEYLSSF
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgtcgccgcgatcgtctttttcctgcagctcttgcccagggcggacgggcag
gtcttcccaggtggttgttcatttgatgagcactacagtaactgtggttatagcgtcgcc
ttgggaaccaatggatttacctgggagcagatcaatacctgggaaaagccaacaatggat
cctgctgtcccaactggctccttcatgatggtgaacagctctgggcgagcatcagggcag
aaagctcacctgctgctgcccacgctgaaggagaatgacacgcactgcatcgacttccac
tattacctgtccagccgggaccgctccagccccggctccctcaacgtctacgtcaaggtc
aacgggggcccccagggcaaccccatctggaacgtgtcaggggtggtgactgaaggctgg
gtgaaggcagagctggccatcagcaccttctggccacatttctatcaggtgatatttgaa
tctgtctctttgaaaggacaccccgggtacatagctgtggatgaagtcagagtccttgcc
cacccctgcagaaaagccccgcatttcctgcggctgcagaacgtggaggtgaacgtgggg
cagaacgccaccttccagtgcatcgccggggggaagtggtcacagcacgacaagctctgg
ctccagcagtggaacgggagggacacagccctgatggtcactcgagtggtcaaccacagg
cgtttctcggccacggtcagcgtggccgacacgtcgcagcgcagcatcagcaagtaccgc
tgcgtcatccgctccgacggcggctccggcgtctccaactacgccgagctcatcgtcaaa
gagcctcccaccccgatcgcgccgccggagctgctggccgtgggcgccacgtacctgtgg
atcaaacccaacgccaactccatcatcggcgacgggcccatcatcctcaaggaggtggag
tacaggaccaccacgggcaactgggcagagacccacatcgtggactctcccaactacaag
ctgtggcacctggaccccgacgtggagtacgagatccgggtgctgctgacgcgccccggg
gaagggggcacggggccgcccggaccccccctcaccaccaggaccaagtgtgcagacccc
gtgcacgggccgcagaacgtggaggtggtggacatccgctcgcggcagctgacgctgcag
tgggagcccttcggctacgccgtgacgcgctgccacagctacaacctcaccgtgcactac
cagtacgtcttcaaccagcagaaattcgaggcggaggagctcatccaaacttcttcccac
tacaccctgcgggggctccggcccttcatgaccatcaggctgaggttggctctctccaac
cccgagggcaaaatggaaagcgaggagctggtggtgcagactgaggaggatgttcctgga
cccgttcctttggaatctatccaaggaggaccttttgaagagaagatctatgttcagtgg
aagcctccaaatgagacaaatggcatcattacactctatgagatcacctacaaggctgtt
gggtctctggatcccagtgctgacctgtccagccaacgagggaaagtcttcaagctccgg
aacgaaacccatcacctttttgtaggattgtacccaggcaccacctactcattcaccatc
aaagccagcacagtcaagggctttgggccacccatcaccaccaggattgcaactaagatt
tcagcaccgtccatgcccgagtacgacacggactctcccctcaatgagactgacaccacc
atcacggtcatgctgaagcctgcccagtcccggggagcacctgtcagtgtctaccagctc
gttgtcaaggaggagaagctgcagaaagcgcggagagctgcagacatcatcgagtgcttc
tctgtgccagtgagctacaagaacgcctccagcctggactccccacactactttgcagct
gagctgaagcccatcaacctccctgtcacacagcccttcaccgtgggtgacaacaagacc
tacaatggctactggaatgctcctctttcccccctgaaaagctacagcatatacttccag
gctcttagcaaggccaatggagaaacaaaaatcaactgtgtccggctggcaacaaaagga
gcttccacccagaattcaaatgcagtggaacctgaaaagcaagttgacagcacggtgaaa
atggctggagttatagctggtctcctgatgtttgttattatcctcttgggagcaatgctt
accatcaaaagaagaagaaatgcatattcctactcctattacttgcattcaagccagtgt
tttaggggcctctctgtcttctacaggaccaggaagctagccaagaagcagaaggagact
cagaccagcacgcagagggagatgggtcctgtggctacttctgacaagacctccaccaaa
ctcagtgctgttcacaatgaagaagctttttcttccagctgccaagatgttaatggattc
acatcaccctctccttgttcattttctgtccaaagcaaaacccttcagagcaaatctatg
ttgaattcctactactcagtttcatcagacaccgtcccatcgaccacgctgttagacagc
agccatggcgagctggcccagccaaccctgaccatccagacccacccgtaccgcagctgc
gagcccgtggagatgtcctacccccgggggcagttccagcccgccatccgagtggcagac
ctgctgcagcacatcacccagatgaagaggggacagggctatggcttcaaggaggagtat
gaggcactccccgaggggcagacggcgtcctgggacacggccaaggaagacgagaaccgc
aacaagaacagatatggaaacataatctcctatgatcactcaagagtgaggctgcagctg
ctggatggggaccctcactctgactacatcaacgccaattacatcgacgggtaccatcgg
cctcgccattacattgctactcaagggccgatgcaagagacagtgaaggatttctggaga
atgatttggcaagaaaactccgcgagtgttgtcatggtcaccaacctggtggaagtgggc
agggtgaagtgtgttcgatactggccagatgacacagaagtctatggagatattaaagtc
acattaattgagacagagccattggcagagtatgtcatacgtaccttcactgtccaaaag
aaaggctaccatgagatccgagagattcggcagttccacttcaccagctggccagaccac
ggcgtgccctgctacgccacggggctcctgggcttcgtccgccaggtgaagttcctcaac
ccccccgaggcaggacccatcgtggtgcactgcagtgctggggccgggaggacagggtgc
tttattgccattgacatcatgctggacatggcagagaatgagggcgtggtggatatattc
aactgcgtgcgggagctgcgctcccaaagggtcaatttggtgcagacagaggagcagtac
gtgtttgtccatgatgccattttggaggcatgtctctgtggcaacacagccattccagtc
tgtgagttcagatccatatattacaacatcagcagactggatccacagaccaattccagc
cagataaaagatgagtttcagaccctgaacatcgtgacgccgcgggtgcggccggaggac
tgcagcatcgggctgctgccccgcaaccacgacaagaaccgctgcatggacgtgctgccc
ctggaccgctgcctgcccttcctcatctccgtggatggggagtccagcaactacatcaat
gctgcactcatggatagccacaagcagcctgctgccttcattgtcacccagcaccccttg
cccaacaccatcacagacttctggaggctggtgtttgattacaactgctcctcagtggtg
atgctcaacgagatggatgcagcacagctctgcatgcagtactggccagagaagacgtcc
tgttgttatggcccaatccaggtggagtttgtttcagcagacattgatgaagatatcatc
aaccggatattccggatttgcaacatggccaggccgcaggacgggtaccgcatcgtgcag
cacctgcagtacatcggctggccggcctacagggacacccctccctccaagcgctccctg
ctgaaggtggtcaggaggctggagaagtggcaggagcagtacgatggcagagacgggcgc
accgtggtccactgcctgaacggcggagggcgcagcggcaccttctgtgccatctgcagc
gtgtgcgagatgatccaacagcagaacatcatcgacgtgttccacatagtgaaaacgcta
cggaataacaaatccaacatggtggagtcactggaacagtataaatttgtatacgaggtt
gcactggaatacttgagttccttttag
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integrated database retrieval system
