Lonchura striata (white-rumped munia): 110473562
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Entry
110473562 CDS
T05897
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110473562 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110473562 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
110473562 (LDB3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
110473562
NCBI-ProteinID:
XP_021391861
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All DBs
Position
6:8765427..8880730
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AA seq
741 aa
AA seq
DB search
MAYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDLVVAIDGVNTDSM
THLEAQNKIKSASHNLSLTLQKSKRPVPVSTTAPRIDSPRAVIPHQKEPAWEINGNRTTF
SPLTNTATGPMGSVLATNGTFSGYLNQQEISLSNSSSYLKTTTVRSSMSSQSVTPDLSPA
KSTLGSKASPALAGGSSPAHQLSPARQYNNPIGLYSAETLREMAEMHKLSLNRRASEGGL
PRGALPIKDPHVDSASPVYQAVLKTQNKPEDDSEDWSRRSANLQSKSFRILAQMTGTEYM
QDPDEEALRRSRDKENLAAASENSTPVEHAPVAPSPAAPAPHASAPQPATAAPNTVSLMT
APATTSLVQESFSSSFQRVLAAPSSLSQPKPFHGPKNMSLAASTISSAISSQSSFNRHSS
TSISYQSKQRNTIQSYTPMPVSGSYSESPAPSAASKTRVVTTASIKPSVYQPAPAPVHSY
TPANTEPASRPPWVTDDSFSQKFAPGKSTTTVTKHILPRGAPVPSPATISAYPSPVSTSS
QPPALARGTVQRAERFPASSRTPLCGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLAD
MCFVEEQNSVYCERCYEQFFAPTCARCHTKIMGEVMHALRQTWHTSCFVCAACKKPFGNS
LFHMEDGEPYCEKDYIALFSTKCHGCDYPVEAGDKFIEALGHTWHDTCFICAVCHVNLEG
QPFYSKKDKPLCKKHAHAINV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagtgtgactctgaatggacctggaccgtggggcttccgactgcaagggggc
aaggacttcaacatgcccttgaccatctccagaatcacccctggcagcaaggcagcacag
tcacagatgaaccagggggaccttgtcgtggctattgatggagtcaacactgacagcatg
acccacctggaggcccagaacaagatcaaatcagccagccacaacctaagcctcactctg
cagaagtctaaacgtccagtgccagtttcaacgactgctcccagaattgactctcccagg
gctgtaattccccatcagaaggaacctgcttgggaaatcaatggcaacagaacaaccttc
agccctctaactaacacggcgactgggcctatgggtagtgttttagcaaccaatggaacc
ttttcaggctacctcaaccagcaagagatcagcctttcaaatagctcttcctacctaaag
actaccacagttagatcttccatgtcctctcagtctgtgactcctgacctttcacctgcc
aagagcacgttaggttccaaagcaagccctgctttggctggtggcagtagccctgcacac
cagctgagcccagcgaggcagtataacaaccccattggcctttactcggcagagaccctg
agggaaatggctgagatgcataaattgagtctcaaccgaagggcttcggaaggtggactt
cctagaggtgccctccctataaaggatccccacgtagacagtgcctctccagtgtatcag
gctgtgcttaaaactcagaacaagcctgaggatgacagtgaggactggagccgtcgctct
gccaacttgcagtcgaagtccttccgcatccttgcccagatgactggaaccgagtacatg
caagatccagatgaagaagccctgaggaggtcaagagacaaggaaaaccttgcagcagca
tcagaaaacagtacccctgttgagcatgccccggtggctcccagtcctgctgctcctgca
ccacatgcttcagcacctcagcctgctactgctgctccaaacacagtcagcctgatgaca
gcaccagccaccacctcactagtgcaagagtctttctcatcctccttccaaagagttctt
gcagcccccagctcactttcccagcctaagcctttccatgggcccaagaacatgtcatta
gcagcttccactatttcatctgctatctcatctcagtctagtttcaaccggcattcttcc
acctccatcagctaccagtcaaagcagagaaacacaatccagtcatatacaccaatgcca
gtttctggaagctacagtgaaagtcctgctccttctgctgcttcaaaaacaagagttgtt
actactgccagcataaagccctctgtctaccagccagcgccagcaccagttcattcctac
acccctgccaacacggagcctgcgagtcgccctccctgggtaacagatgactccttttcc
cagaaatttgcacctggaaaatccaccaccactgtcacaaagcacatcctaccaaggggt
gctccagtgccatctcctgccacgatttctgcttacccgtctccagtttcaacttcttcc
cagccccctgcattagcccggggaacagttcagagggcggagcgttttcctgccagcagc
cgaactcctctctgcgggcactgtaacagcatcattcgaggtcctttcctggtagccatg
ggacgctcttggcacccagaagaattcaattgtgcttactgcaagacatccttggctgat
atgtgctttgtggaggagcagaacagtgtgtactgtgagcgctgctatgaacagttcttc
gcaccaacctgtgccagatgccacaccaagattatgggggaagtgatgcatgccctaaga
cagacttggcacacaagttgctttgtctgtgctgcttgtaagaagccatttgggaatagc
ctgttccacatggaggacggggagccttactgtgagaaagattatattgctttgttcagc
acaaaatgtcatggctgtgattatcctgttgaagctggagataaattcattgaagctctt
ggacacacttggcatgacacctgcttcatttgtgctgtatgccatgtgaatttggaaggt
cagccattctactccaagaaagacaagccactgtgcaagaagcatgcccatgccatcaat
gtttaa
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