Lonchura striata (white-rumped munia): 110473588
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Entry
110473588 CDS
T05897
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03410
Base excision repair
lsr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110473588 (POLL)
03450 Non-homologous end-joining
110473588 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110473588 (POLL)
Enzymes [BR:
lsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110473588 (POLL)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
110473588 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
110473588 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
BRCT_2
HHH_5
PTCB-BRCT
LIG3_BRCT
NTP_transf_2
HHH
Motif
Other DBs
NCBI-GeneID:
110473588
NCBI-ProteinID:
XP_021391913
UniProt:
A0A218V9E6
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All DBs
Position
6:22359031..22370166
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AA seq
579 aa
AA seq
DB search
MEPQGIVKAFPKRKKVRDDSEKSIPPKISKEEGTEIPEAEWLKPVIAYVLQAGIGQTRAE
IFRRQIVQNGGIVHRQLSSEVTHVIVAEDMDCERAFRLLRLTKLRPGLQLVKAAWLSACI
RDQKLLSTAGYGVFIPHRYLEEEELQKEQQQIPDRGKIQLPAEEGASKQSTESQVEDSSQ
RGLGTLGQQQLAEKYSDDEDSEGEDAGVTQGDLEALISGHYPVKSSEEISDSSYTVAQPP
SKWVCAQSSNTKKENHNQCITEKLEVLAKAYSVQGDKWRALGYSKAINALKSYHKPVTSY
QEACKIPGIGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIWGAGVKTAQMWYQQG
FRTLDDIRTKATLTRQQAVGLKHYTDFLERMPREEAAEIEQTVRQAALALKPGLVCIACG
SYRRGKATCGDVDVLVTHPDGQSHRGVFSKLLNSLRRSGFLTDDLVSQEDNGDQQKYLGV
CRLPGPAQRHRRLDIIVVPYGEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSSAV
VRGPGGAKVASGHTLPTPTERDVFIQLGLPYREPSERDW
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagccacaagggattgtcaaagcctttcccaagaggaagaaggtgagggatgactcg
gagaaaagcatccctccaaagatctcgaaagaggaaggaacagagatacctgaggcagag
tggctgaaaccagtcatcgcctatgtgttgcaagccggcattgggcagaccagggccgag
atcttccgcaggcagatcgtccagaacgggggtatcgttcacaggcagctctcctcggag
gtgacacacgtcattgtggctgaggacatggactgtgagcgcgcctttcggctcctcaga
ttgaccaagctgcgcccggggctgcagctggtgaaggcagcctggcttagtgcttgcatt
agggaccagaagctgctgagtactgctggctatggtgtctttatccctcacaggtacctg
gaggaagaggaattgcagaaagaacagcaacagatcccggacagaggaaaaatccagctg
ccagcagaggagggagcatcaaaacagagtactgaatcccaggtggaggattcctcacag
cgaggcttgggcacccttgggcagcagcaactggctgagaaatactctgatgatgaagac
agtgaaggagaagatgctggtgtcacccagggagatctggaagcattgatttctggccac
taccctgtgaaatcatcagaggagatcagtgacagctcttacacagtggcccagcctccc
agcaagtgggtttgtgcccagtcttccaacaccaagaaggaaaatcacaaccaatgcatc
acagagaagctggaagtgctggcaaaggcttactctgtccagggggacaagtggagagct
ctgggctactccaaagcaatcaatgcactcaagagctaccacaagccagtcacctcctac
caggaagcctgtaaaatccctgggattgggaagcggatggcagagaagatcctggagatc
ttggagagtgggcacctgcgcaagctggatcacatcagtgagagtgtgcctgtgctggag
ttattttccaacatctggggagcaggggtcaagacagctcagatgtggtaccagcagggt
ttccggacactggatgacatccgcaccaaggccactctgaccaggcagcaggctgtgggg
ctgaagcactacacggatttcctggagcgcatgcctcgggaggaagctgcagaaatagag
cagactgtcagacaagctgccctggccctgaagcctggcctcgtgtgtattgcgtgtggc
tcctaccgtcgggggaaggccacgtgtggagatgtggatgtgcttgtcactcacccagat
gggcagtctcaccgtggggtgttcagcaagctgctcaacagcctccgcaggagcggcttc
cttacagatgacctggtgagtcaggaggacaacggtgatcagcagaagtacctgggcgtg
tgccgcctgcccgggccagcgcagcggcaccgccggctggacatcatcgtggtgccgtac
ggcgagttcgcctgtgccctgctctacttcacgggctcggctcacttcaaccgctccatg
cgcgccctggccaagaccaagggcatgagcctgtcggagcacgcgctcagctcggccgtg
gtgcgaggccccgggggtgccaaggtggcatctggccatactctgcccacgcccaccgag
agagatgtcttcatccagctggggctgccttaccgggagccctccgaacgggactggtga
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