Lonchura striata (white-rumped munia): 110473609
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Entry
110473609 CDS
T05897
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110473609 (SORCS3)
Membrane trafficking [BR:
lsr04131
]
Endocytosis
Others
Others
110473609 (SORCS3)
Endosome - Lysosome transport
110473609 (SORCS3)
Endosome - Golgi transport
110473609 (SORCS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
110473609
NCBI-ProteinID:
XP_021391938
LinkDB
All DBs
Position
6:24215581..24483427
Genome browser
AA seq
1218 aa
AA seq
DB search
MEKGTNSFPTCHTIFLAWTWFLLLSWCCTGAEITCRSCSSPSPSWPSSSSRLRQEQRQPP
PPRGLRSWPGGRARGSVGAAAAAEPVPGAEPVPGAEPGGQAGPRGAALRAAGAGGGAPGS
RGPAAPRTRRSTEGRRALPAGGGRGVPAAEGQRGGRAQPRGPPEDARAARPRGAEEPRLS
STTFALTGDAAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTYEKLN
DKVGLKTVLSYLYVSPTNKRKIMLLSDPEIESSILISSDEGATYQKYRLNFYIQSLLFHP
KQEEWILAYSLDQKLYSSMDFGRKWQLMHERVTPNRFYWSVTGLDKEPDLVHMEARTADG
HTHYLTCRIQECSETKRSGPFPRSIDVSSLVVQDEYIFIQVTTGGRATYYVSYRREPFAQ
IKLPKYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSSRGL
EGNIVIDLYEVAGIKGIFLANRKVDDQIKTFITYNKGRDWRLLQAPDTDLRGDPVLCQLP
FCSLHLRLQLSENPYTSGSISSKDTAPGLLVATGNIGSELSYTDVGVFISSDGGNSWRQI
FEEEYNVWFLDWGGALVAMKHTSVPIRHMWVSFDEGRSWTKYSFTSTPLFVDGSLVDPGI
ETQIMTVFGHFSLRSEWQLVKVDYKSLFSHRCTKDDYQTWHLHNQGEPCVMGERKIYKKR
KPGAQCSLSRDYSQTVVSEPCVCGQGDFECDYGYERHSNNQCIPAFWFSPSSLSKDCNVG
QNYWNSTGYRRIVSNNCTDGLREKYMAKMEKCPGKAPRGLHILTSNGKLVMEQGHNATFI
ILMEEGDLQRTNIQLDFGDGIAVSYANFSPVEDGIRHVYKSAGIFQVTAYAENSLGSDTA
VLFLHVVCPVEHVHLSVPFVAIRNKDVNITAVVWPSQAGTLTYFWWFGNSTKPLITLESS
ISYMFTVEGMNTVTVQVAGGNTLIQDTKEVAVHEYFQSQLLSFSPNLDYHNPDIPEWRQD
VGKVIKRALAQVTGIPDEQILVAVFPGLPTSAELFILPHKNTTERRKSSEADLEQVVEIL
FNALNQNLVQFELKPGVEVVVYVTQLTLAPLVDSSSGHSSSAMLMLLSVVFVGLAVFLIY
KFKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSEFTDPEELMDKELDTRVMGSI
STIANSESTKEIPNCTSV
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggggaccaacagctttccgacctgccacaccatttttctcgcctggacatgg
ttcttacttctctcttggtgttgcaccggcgccgaaataacttgcagatcctgctcatct
ccgtcgccctcctggccgtcctcctcgtctcgccttaggcaggagcagcgacagccgccg
ccgccgcgaggattacggagctggccgggcggccgagcgcggggctcggtcggggcggcg
gccgccgcggagccggtgccgggcgcggagccggtgccgggcgcggagccggggggccaa
gcggggccgcggggagcggcgctccgcgcggcgggggcgggaggcggcgcgcccgggagc
cggggcccggcggcgccgcggacccgccggagcaccgaggggcgccgggcgctgccggcc
ggcggcggccggggggtgcccgcggccgaggggcagcgcggcggccgcgctcagccccgc
gggcccccggaggacgcgagagcggcgcggccgcgaggggccgaggagccgaggctgagc
agcaccaccttcgcgctcaccggggatgcggcgcacaaccaagccatggtgcactggtcc
ggacacaacagcagcgtgattctcattctgacaaagctctatgacttcaacctggggagt
gtcacagagagctcactgtggaggtcaacagactatggcactacctatgaaaagctaaat
gacaaagtaggcctgaagactgtgctgagctacctatatgtcagtcccactaacaagagg
aagatcatgcttcttagtgatccagagattgagagcagtatcctcatcagctctgatgaa
ggagctacctatcagaagtaccgtttgaatttctatatccagagcttgctcttccacccc
aagcaggaggagtggatcttggcctacagtctggatcaaaagctgtacagctccatggac
tttggaagaaaatggcagctcatgcatgagcgggtcaccccaaacaggttttactggtca
gtgactggtttggataaagaacctgaccttgtgcacatggaagcccggacagctgatgga
cacacccactatttgacctgtcggatccaggagtgctccgagaccaagaggagcgggccc
tttccgcgctccatcgacgtcagctccctggttgttcaggatgaatacatcttcatccag
gtgacaactggtggaagagcaacttactatgtgtcatacagacgggagccttttgcacag
atcaaattacccaaatactcccttcctaaggacatgcatattatcagcacagatgagaat
caggtgtttgcagctgttcaggagtggaaccagaatgacacctataacctgtacatctcg
gacacccgcggggtctacttcaccctggccttggaaaatgtgaaaagcagccgaggactg
gaggggaatattgtcattgacctttatgaggtagcagggatcaaaggcatattcctggct
aacaggaaggtggatgaccagatcaagactttcattacctacaacaagggcagagactgg
cgtttgctacaggcaccggacactgatcttagaggggatcctgtactttgccagctgccc
ttttgctcattgcacttgcgcctgcagctctcggagaatccatatacttcagggagcatt
tccagcaaagacacagctcctgggctgctggtggccacaggcaatattggctctgaactt
tcctacacggatgttggcgtgttcatctcttctgatggtggcaattcctggagacagatc
tttgaggaggaatacaacgtttggtttctggactggggaggggcactagtggccatgaaa
cacacgtcagtgcccatccggcacatgtgggtgagttttgatgagggaagatcctggact
aaatacagtttcacatcaacaccactttttgtggatggatcccttgtagaccctggcata
gagacccagataatgacagtttttgggcacttcagtctccgttctgagtggcagctggtc
aaggtggactacaagtctctcttcagccacaggtgtaccaaggatgactaccaaacctgg
catctgcacaatcagggggagccttgtgtcatgggggagaggaagatctataaaaaacgc
aaacctggagcccagtgttccctaagtcgggactattcccaaactgtggtgtctgaacca
tgtgtctgtggccaaggagactttgagtgtgactatggatatgagaggcacagcaacaac
cagtgcattccagccttctggttcagcccgtcctccctgtccaaggattgcaacgttggt
cagaactactggaacagcactgggtaccgcaggattgtgtccaacaactgcacagatggc
ttgagagagaagtacatggccaagatggagaaatgccctggaaaagcacctcggggattg
cacatcctcacctccaatgggaagctggtcatggagcaggggcacaacgccaccttcatc
atcctcatggaagagggtgatctccaaaggacaaacatccagcttgattttggagatggc
attgcagtgtcctatgccaatttcagccctgtggaggatggcatccggcacgtgtataag
agtgctggaatcttccaggtgacggcgtatgcagagaacagcctgggctcagacactgct
gtcctgttcctgcatgtggtctgtccagtggagcacgtccatctgagtgtcccctttgtt
gccatcagaaacaaggatgtcaacattactgcagtggtttggcccagccaggcaggcaca
cttacctacttctggtggtttggcaacagcaccaagcccctcatcaccttggagagcagc
atctcgtacatgttcactgtggaggggatgaacactgtcaccgtgcaggttgctgggggc
aacaccctcatccaggacaccaaggaggtcgcagtgcatgagtatttccaatctcagctc
ctgtcattttctcccaacttggactaccataaccctgacatccctgaatggagacaagat
gttggcaaagtcatcaagagagcactggcacaggtgactggtattcctgatgaacagatc
ctggtggctgtgttccctgggctgcctacttctgctgaactcttcatactgccccacaaa
aacacaactgagaggaggaaaagcagtgaggctgatctggagcaagtggtagaaatcctt
tttaatgctctcaaccagaacctggtccagtttgaactgaagcctggagttgaagtggtt
gtgtatgtcactcagttaacattagcaccccttgtggattccagctcgggtcacagcagt
tcagcgatgctgatgttgttgtcagtggtgtttgtgggcttggctgtttttttaatctac
aaattcaagaggaaaatcccttggattaacatctatgcccaagttcaacatgacaaggag
caggaaatgattggctctgtcagccaaagtgaaaatgcccccaaaatcaccctgagtgag
ttcacagatcctgaggagctgatggacaaagagctggacacacgagtgatgggaagcatc
tcaacaattgccaacagtgaaagcacaaaggaaatccccaactgcactagtgtttaa
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