Lonchura striata (white-rumped munia): 110473674
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Entry
110473674 CDS
T05897
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110473674 (MMS19)
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110473674 (MMS19)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110473674 (MMS19)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
110473674 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
RIX1
Motif
Other DBs
NCBI-GeneID:
110473674
NCBI-ProteinID:
XP_021392075
UniProt:
A0A218V8N7
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All DBs
Position
6:21734217..21749362
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AA seq
1028 aa
AA seq
DB search
MAAAGPGPGAGAEAQALAASVRDFVSGQQDGRAAEVAAGVKDGRWTVLQLVEALGFCLEN
TDPRMRGRGIQLLSQVLLQCYSLLQEKEVLHLVMFYESRLQDNHLVIPSVLQGLRALSMC
EVLSPGLAVSVLKAIFQEVHVQSLLQLDRHTVYSIITNFMSTREEELKGLGANFTFGFIQ
VMDGEKDPRNLLVAFQIVRDLIAKDYDLGPFVEELFEVTSCYFPVDFTPPPNDPHGIQRE
DLILSLRAVLASTTQFAEFLLPLLIEKLDSELQSAKLDSLQTLTACCAIYGQKELQEFLP
SLWSSLRREVFQTASEKIETECLAALRALSACLSRSVLSSDSEDLLDSFLSSILQDCRHH
LCEPDMKLVWPSAKLLQAAAGASLRTYHCITHSVLPLLLEQYTKHMQSSQRRTILEMLLG
FLELQQKWGNVEEDESALLLLQAQICSVVFSALLDPSVQLQLVGIKALTVLGSLQGFLSS
SNLELVVDHLIRLALHEEDSQSSEAAMEAAGSLAPTFPKVFSGHMVPRLKEELQSEREES
YHNHHSLQQRCLQALAAVSTHTSIVRETVPILLQHLQTVQKGTEARNTQDMISVCQSLHR
VALQCQQDAEGCWYFHQTVVPCLLAMAVQAAMPESTHTLPGKALLEEEVLAAMIPVISAA
TTHLRPELAAQSVSHVVPLFLDGDVSFLPQNSFPCSFQPFGDGEFLEAQRRLVALLMAFI
CSLPRDVAIPQQEWLLRELLALSCSCNCPFTATTAAKCFAGLVNKHPAGQQLDEILQLAV
NRMEPSLAEGPRRTQTLTLLLWVTKALVLRYHPLSSYLTDKLLGLLGDTELGPATADGFS
LLMAESPDVLHKGCHADVRIMFRQRFFTDNVPKLVQGFHGAGPDVKANYLKGLSHVLNHL
PKPVLVTELPTLLSLLLEALSCSDRVVQLSTLSCLHPLLLEAPQIMSLHVDTLVTKFLNL
TSSPTMAVRIAALRCAHALTRLPTTVLLPYKGRVIRALAKPLDDKKRLVRKEAVAARGEW
FLLGSPGR
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgggcccgggcccggggccggggcggaggctcaggctctcgccgcctcc
gtccgggacttcgtgtccgggcagcaggacggccgtgccgcggaggtggcggcaggggtg
aaagatggaaggtggacagtgctgcagcttgtggaagccctggggttttgcctggagaac
acagatcctcggatgcgagggcgaggcatccagctgttgtcacaagtcctgctccagtgt
tactccctgctccaggagaaggaagtgctgcatctggtcatgttctatgagagccggctg
caagataatcacctggtgatcccctcggtgctccagggactccgggcactgagcatgtgt
gaggtgctgtccccagggctagcagtgtctgtgctcaaagccatcttccaggaggtacat
gtgcagtccttgctgcaactggaccgccacacagtctacagcatcatcaccaacttcatg
agcaccagggaggaagagctgaaaggcctgggtgccaacttcacctttggcttcatccag
gtcatggatggggagaaggatccccgcaatctgcttgtggccttccagattgtgcgtgat
ctcattgccaaggactatgacctgggtccctttgtggaggagctctttgaagttacatcc
tgctacttccctgttgattttactccgccccccaatgatcctcatggcatccagagagaa
gatttgatcctgagcctccgggctgtactggcttccacaacccagtttgctgagttcctt
ctccctctgcttattgagaagttggactcagaactgcaaagtgccaagcttgactcgctg
cagactctgactgcctgctgtgccatctatgggcagaaggagctgcaggaattccttccc
agcctctggtcatccctgcgcagagaggtgttccagacagcgagcgagaagattgagacg
gagtgcctggctgcgctgcgtgcgctctctgcctgcctctcccgctccgtgctcagctct
gattctgaggatctgctggattccttcctcagcagcatcctgcaagattgcaggcaccat
ctgtgtgagcccgacatgaagctggtgtggcccagtgccaaactcctgcaggcagcagcg
ggtgcctccctccgcacctaccactgcatcacccacagcgtcctgcccctgctgctggag
cagtacaccaagcacatgcagagcagccagaggaggacaatcctggaaatgctgttaggc
ttcctggagttgcagcagaagtggggaaatgtggaagaagatgagagtgctctgctgttg
ctccaagcccagatttgctctgtggtgttctcagcgctgctggatcccagtgtgcagctg
cagctggttgggatcaaagcactgactgtcctgggctccctgcaaggcttcctgtcttcc
tctaatctggagctggttgtggatcacctaatccgtcttgctctgcatgaggaggattcc
caaagcagtgaagcagcaatggaggcagctgggtccctggcccccaccttcccaaaggtt
ttttctggacacatggtacccaggcttaaagaggagctgcagtcagagcgggaggagagc
taccacaaccaccactccttgcagcagcgctgcctgcaggccctggcagctgtgtccacc
cacaccagcattgtgagggagactgtccccatcctgctacagcatctccagacggtgcag
aaagggactgaggccaggaacacccaagacatgatctccgtgtgccagagcctgcaccgt
gtggccctgcagtgccagcaggatgctgagggctgctggtacttccaccagacggtggtg
ccgtgcctgctggccatggctgtgcaggcagccatgccagagagcactcatacgctgcca
ggcaaggcactgctggaggaagaggtgctggctgccatgatcccagtcatcagtgctgcc
accactcacctgcgccctgagctggctgcccagagtgtgtctcatgtggtgcccctcttt
ctggatggagatgtctccttcctaccccagaacagttttccctgctccttccagcctttt
ggggatggggagttcttggaggcacagagacgcctggttgccctcctcatggccttcatc
tgctccttgccccgtgatgtggcaatccctcagcaggaatggctgctccgggagctgctg
gcattgagctgttcctgcaactgtcccttcacggccaccacagctgccaagtgctttgca
gggctggtgaacaagcacccagcagggcagcagctggatgaaatcctgcagcttgcagtg
aacaggatggagcccagccttgcagaggggccccgccgaacacagacactcaccctgctg
ctctgggtgaccaaagccctggtgctgcgctaccaccccctaagctcttacctgacagac
aagctgctgggcctgctgggtgacacggagctgggccctgccacagctgatggcttctcc
ttgctcatggccgagtccccggacgtgctgcacaagggctgccacgctgacgtgcgcatc
atgttccgccagcgcttcttcactgataatgtccccaagctggtgcaaggcttccatggg
gctggccccgatgtgaaggcaaattacctgaagggcctgtcccatgtgctcaaccacctc
cccaaacctgtgctggtgacagagctgcccacgcttctttccctcctgcttgaggccttg
tcctgctcagatcgtgtagtacagctctctacactgagctgcctccacccactgctgctc
gaagctccccagatcatgagcctgcatgtcgacacactggtcaccaagttcctcaacctc
acctccagccccaccatggctgtccgcatcgccgccctgcgctgtgcccatgcccttacc
aggctgcccacaacagtgctgctcccatacaagggccgagttatccgggcactggccaag
cctttggatgacaaaaagaggctggtgcggaaggaagcagtggcagcacgtggagaatgg
ttcctgcttgggagcccaggcaggtga
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