Lonchura striata (white-rumped munia): 110473804
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Entry
110473804 CDS
T05897
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsr03041
]
110473804 (RBM39)
Spliceosome [BR:
lsr03041
]
Common components
Common spliceosomal components
General mRNP proteins
110473804 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
110473804
NCBI-ProteinID:
XP_021392336
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All DBs
Position
20:1116034..1146948
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AA seq
521 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
RRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRD
VRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANN
LQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDS
ECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQCFQLS
NMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVN
ALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccatgaagaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagccatgacagaaagaggagcagaagtaaggaacgcaagcggagcagagat
cgggaacggaaaaagagcagaagccgggaaaggaaacggagcagaagcaaagaacgcaga
cgcagccggtctaggagtagagatcgcagattcagaggccgctatagaagtccttattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgccccacagcatcaaatta
agacgtcgctccagaagcaaaagtcctttcagaaaagacaaaagccctgttagagaacct
attgataatcttacccctgaagagagggatgctcgaacagtgttctgcatgcagttggct
gcaagaatccgaccaagagacctggaagaatttttctctacagtagggaaggttcgagat
gtgcgaatgatttcggatagaaattccagacgttcaaaggggattgcttatgttgaattt
gttgatgttagttcagtacccctggcaataggactgactggacagagagtcctgggtgta
cctatcatagtacaggcatcacaggcagagaaaaacagagcagcagcaatggcaaataat
ctgcagaagggcagtgctggtcctatgaggctctatgtgggatcattacacttcaatata
actgaggatatgcttcgaggaatcttcgagccatttggcaggattgaaagtattcagctc
atgatggacagtgaaactggacgctcaaaaggatatggattcattacgttctcagactct
gagtgtgccaaaaaggccctggaacaactcaatggatttgagctggctgggaggccaatg
aaagtaggacatgtaactgagcgtactgatgcttccagtgctagctcatttttggacagt
gatgagttggaacggactggaattgatttgggaacaactggtcgccttcagttgatggca
agacttgcagaaggtactggtttgcagattcctccagctgcacaacaggctctgcagatg
agtggatctttggcctttggagctgtgacagacttgcaaacaagactgtcccagcagaat
gaagttctggctgcagcagcttctgtacaaccacttgcaacacagtgcttccagctttcc
aacatgtttaatcctcaaactgaagaagaagctggctgggacacagaaattaaagatgat
gtgattgaggaatgtaacaaacatggaggagttatccacatctacgttgacaaaaactca
gctcagggcaatgtgtatgtcaaatgtccctccatcgctgctgccattgcagctgtcaat
gctttgcatgggaggtggtttgcaggtaaaatgattacagcagcgtatgtacctcttcca
acataccacagccttttcccagactctatgactgcaacccaactactggttcctgttcga
cgatga
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