Lonchura striata domestica (Bengalese finch): 110473979
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Entry
110473979 CDS
T05897
Symbol
SRF
Name
(RefSeq) serum response factor
KO
K04378
serum response factor
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110473979 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110473979 (SRF)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
110473979 (SRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
110473979
NCBI-ProteinID:
XP_021392695
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Position
3:complement(19131449..19145706)
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AA seq
484 aa
AA seq
DB search
MLPSQAGAGNGAAAALARGSGLGRSPVPRGANGGGAAAGAPGGCLKREALYSGSEGDSES
AEEEELGGERRGVKRGLAEAAAAAAAAGPAAGAAAAAAYSGGGGGGAVSGAKPGKKTRGR
VKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ
PMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSSGETKDAL
KPAFTVTNLPGTTSIQTAPTTSTSMQVSSGPSFPITNYLAPVSASISPNAVTSANGTVLK
TTGASAVTSGGLMPIPTGFTLMSGGTMAQQVPVQAIQVHQAPQQTSPSSDSSTDLTQTSS
SGTVTLPATIMTSSVPTTVGGHMMYPSPHAVMYAPTSGLADGGLAVLNAFPQAPSAMQVS
HGQVQDQGGVPQVFLTAPSGTVQIPVSAVQLHQMAVIGQQSSSGSSLTELQVVNLDTSHS
VKSD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgagccaggccggggccgggaacggcgccgccgccgcgctggcccgcggctcg
gggctgggccggtcgccggtgccgcgtggggcgaacggcggcggggcggcggcgggggcg
cccgggggctgcctaaagcgggaggcgctgtacagcggcagcgagggcgactcggagtcg
gccgaggaggaggagctgggcggcgagcggcgcggcgtgaagcgtggcctggccgaggcg
gcggcggcggcagcggcggcggggcccgcggcgggagcggcggcggcggccgcctacagc
ggcggcgggggcggcggggccgtgagcggcgccaagcccgggaagaagacgcggggccgg
gtgaagatcaagatggagttcatcgacaacaagctgcggcgctacacaaccttcagcaag
aggaaaaccggcatcatgaagaaggcctatgagctctccacgctaactggcactcaagtc
ctgctgttggtggccagcgagacgggccatgtgtacacgtttgccacacgaaagctgcag
cccatgatcaccagcgagacggggaaggcgttgatccaaacatgcctcaattccccggac
tcgcccccacgctcggaccccaccactgaccagcgcatgagtgccactggttttgaggag
acggacctcacctaccaggtgtccgagtcggacagcagcggggagaccaaggacgccctg
aaacccgcattcactgtcaccaacctgccgggaacaacgtccatccagacagccccgacc
acctcgacctccatgcaggtcagcagtggcccgtcattccccatcactaattacctggcg
ccagtgtctgccagcatcagccccaatgccgtcaccagtgccaacgggacagtgctgaag
actactggagccagtgcagtgacgtctgggggcctcatgccgatacccactggcttcacc
ctcatgtcaggtggtaccatggctcagcaggttccagtccaggcaatccaggtgcaccag
gcaccgcagcaaacgtctccctctagtgacagcagcactgaccttacccagacctcctcc
agcggaacagtgaccctccctgcaaccatcatgacgtcgtctgtgccaaccaccgtgggc
ggccacatgatgtaccccagcccgcacgcggtgatgtacgcgcccacctccggcctggcc
gacggcgggctcgcggtgctcaacgctttcccacaggcgccctcagcgatgcaggtgtcc
cacggccaggtccaggatcagggtggtgtcccccaagtgttcctgacagccccatcaggc
acggttcagatccctgtctcagctgtccagcttcaccagatggctgtcatcgggcagcag
agcagcagtggcagcagcctgacggagctgcaggtggtcaacttggacacctcacacagc
gtcaagagtgactga
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