Lonchura striata (white-rumped munia): 110473998
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Entry
110473998 CDS
T05897
Symbol
VTI1B
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110473998 (VTI1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110473998 (VTI1B)
Membrane trafficking [BR:
lsr04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
110473998 (VTI1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
WXG100
Fusion_gly
Snapin_Pallidin
DUF4407
DUF3958
RSS_P20
Motif
Other DBs
NCBI-GeneID:
110473998
NCBI-ProteinID:
XP_021392719
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All DBs
Position
5:32650810..32662899
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AA seq
232 aa
AA seq
DB search
MAGRGAASSEQLERLHEIFRGLHGDLRGVPERLRGSAAEEKKKLVREFDEKQREANETLR
EMEEELKYAPIPFRNQMMSKIRAYRRDLSMFQREMRSTDLGLGRGNQGDTKYGIFATENE
QSTNLQSQRVLLLQGTDSLNRASESIERSHRIAAETDQIGTDIIEELGEQREQLERTKSR
LVNTSENLSKSRKILRSMSRRITTNKLLLSIIIILELAILGGVVYFKFFRKK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcggggccgcgtcctcggagcagctggagcggctgcacgagatcttccgc
gggctgcacggagacctgcggggcgtccccgagcggctgcggggcagtgcggccgaggag
aagaaaaaactggttcgagaattcgatgagaagcagcgtgaagccaatgagacgctgcgg
gaaatggaggaagaactgaagtacgctcctatacctttccgcaaccaaatgatgagcaaa
atccgagcctacagaagagatctgtccatgttccagagggagatgagaagcacagatttg
ggattgggccgtggaaaccaaggcgatacaaaatatggaatctttgccacagaaaatgaa
cagagtactaacctgcagtcacagagggtgctgcttctccagggcacagacagtctgaac
cgagccagcgagagcatcgagcgctcgcaccgaatcgcagccgaaaccgatcagattggc
acggatatcatcgaggaactcggggagcagcgggagcagctggaacgcaccaagagcagg
ttggtgaatacaagtgagaacttgagcaagagtcgcaagattctacgctcgatgtctcgg
agaataaccacaaataagttgctgctgtcaattatcatcatcctggaactggccatccta
ggaggtgtggtctacttcaagttctttcgcaagaaatga
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