Lonchura striata (white-rumped munia): 110474045
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Entry
110474045 CDS
T05897
Symbol
ELP1
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110474045 (ELP1)
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
110474045 (ELP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_IF140-IFT172
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
MlrA_C
Motif
Other DBs
NCBI-GeneID:
110474045
NCBI-ProteinID:
XP_021392786
LinkDB
All DBs
Position
Z:26560938..26594823
Genome browser
AA seq
1334 aa
AA seq
DB search
MRNLRLLRAGGCRSTAAKGTPQCFCLGAESGAVLVGSQYGLVEMRPAGNSVSREVSLTVD
GFLPEDGSGCIVGVEDLPEQESVCVATAAGDILLCNLSTEQVECVGSVDSGLSVMSWSPD
QELVLLATGQQTLIMMTRDFEPITEKQIHQDEFGEGKFVALGWGKKETQFHGSEGKEAAH
RKQTEVLPASAWDDGRPRVTWRGDGQFVAVSAVCPETGARKVRVWSRELVLQSTSEPISG
LEQALSWKPSGNLIASTQEKPNRHDVVFLEKNGLLHGEFTLPFQKGQVKVNEMLWNADST
ILAIWLEDLKVENSNPKTYVQLWTTGNYHWYLKQSLHFSSLEENQLVSLLWDRENLYRLH
ILCQGWHYLFYDWHWTTDHGLGENSQHMANVAVIDGDKVLVTAFQHAVVPPPMCTYELQL
QQAVNQVAFHTDPKHSGDVVVLDADNRISVYRYGQSTVNDPSVKFGAVGGNGFKAAVETP
YLDKIYRVDVSSSSSEVMNPLGLRFLTWLPDDSFLVVGQGQHAAQSVLHHLTAVPHVAGA
EEECLNLRLSVPVDGEVISLYCSPVTKTVALQLTDGRILKYLWEASTPVLEPWRSSSSSA
VQFPYRCVQTSITRISGEEVILGLTDRCRFFVNDTEVASNITSFATYNEFLLVTTNSHTC
QCFCLKNLSVKALQASLSSAASPNSETLRKVERGSRIVIVVPQDTKVVLQMPRGNLETIH
HRALVLAQIRKWLDRLMFKEAFQCMRKLRINLNLLYDHNPKVFLENTETFIRQIDSVNYI
NLFVTELKEEDFTKSMYPSLNGSSNSQPPQHPDQKKVNLICDVMRVAMEHIDPQKYCLSI
LTAHVKKSPPELEIALQKVHNLRESITPNVQAVSAEEALKYLLFLVDVNELYDYSLGTYD
FDLVVMVAEKSQKDPKEYLPFLNTLRKMETNYQRYTIDRHLKRYTKALGHLSKCGPEHFS
ELLNLVKDQNLYSEALKLYPSSTQEYKDISEAYGEYLTQKQLYEQAALIFARAGIFAKAL
DAFQSSGSWQQAMCMASRLGYTKDKLSSLARSMAGKLVEQRKYAEAAILLEQYTQDYEEA
VLLLLEGAFWEEALRLIHKYGRLDILETNLKPAILEAQKSQLIFLDSQKTAFLRHKSRLQ
VVRELKEKACENLQDYEVPNCPESELFSETSSVVTASDMNSKYTHSNSRISARSSKNRRK
AERKRYSLKEGSPFEDIALLEVLGESVRAVETVKGEIHILLKQLVLFGYDEQAGALQQVL
EEVLQLMVASVPEIWTPDLQQSSVSLVLGPNSTANSITAAYQQKRMMPSAVQDPEVLTPP
KFNKNLQWKLHLLQ
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatctgaggctgctgcgggccggtgggtgccgctccaccgccgccaagggcact
ccgcagtgcttctgcctcggcgccgagtctggcgcggttcttgtgggctcccagtacggg
ctcgtggagatgcgccccgccgggaattcggtatcaagagaagtttccctgactgtggat
gggttcttgcctgaggatggaagtggctgtatcgtgggtgttgaagatcttccagagcag
gagagtgtgtgtgttgctacagcagctggagacatccttctgtgcaatctgagcacagaa
caggtggaatgtgttggaagtgtggacagtggtctgagtgtgatgagctggagtcccgac
caagagcttgttttgcttgcaacaggtcagcagacactcatcatgatgacaagggatttt
gaaccaattactgagaagcaaatccaccaagatgagtttggagaaggaaagtttgttgct
cttggctggggtaaaaaggagacacagttccatggatcagaagggaaagaggcagcacat
cgtaaacagacggaagtgttaccagcatcagcctgggatgatggcaggcctcgggtgact
tggagaggagacgggcagtttgttgcagtgagtgctgtctgtccagagacaggtgctcgg
aaggtccgggtatggagcagagagcttgtgctgcagtctacaagtgagcctatctcagga
ttagaacaagcattgtcctggaagccctcaggaaacctgatagcatctacacaagaaaaa
cccaacagacacgatgtagtttttttggaaaagaatggacttcttcatggagagttcacc
ctccctttccagaaagggcaggtcaaagttaatgaaatgctttggaatgcagattctaca
atcctggctatatggctggaagacctgaaggtggaaaactccaacccaaagacttatgtt
cagctgtggaccacagggaactatcactggtacctaaagcaaagtctacacttcagtagc
ttggaggaaaatcagttggtgtcactgctatgggaccgagagaacctgtacagactgcat
atactctgccagggctggcattacctcttctacgactggcactggaccacagaccatggg
ctgggagagaatagccaacatatggcaaatgtggctgtaatagatggagataaagtgctt
gtcacagccttccagcatgctgtggtgcctccacccatgtgtacctatgagctccaactc
caacaggcagttaatcaggttgcatttcacacagatcccaaacatagtggggacgtggtt
gtcctggatgctgataacaggatctctgtgtacagatacggacagagtacagttaatgat
ccttctgtcaagtttggagctgtgggaggaaatggctttaaagcagctgtggaaacacca
tacctggataaaatctacagagttgatgtgagtagcagcagcagtgaagtgatgaatccg
ctggggctccgatttctcacatggctgccagatgacagcttcctggttgttggtcaaggt
cagcatgctgctcagtctgtccttcaccatctgactgcagtgcctcacgtggctggagct
gaagaagaatgcctgaatttacgattgtcagtgcctgtagatggagaagtgatcagcctg
tactgcagccctgtgaccaaaactgtagctctgcagctgactgatggacgaatcttaaaa
tacctgtgggaggcttctactccagtccttgagccctggcggagtagcagtagctctgct
gttcagttcccctaccgttgtgtgcagacttccatcacaaggatcagtggtgaagaggtg
atcttgggcctcacagatcgatgccgtttttttgttaatgatactgaggttgcttctaac
atcacatcattcgcaacatacaatgagtttttgttggtgacaaccaactcgcacacctgt
cagtgcttctgcttgaagaacttgtcagtgaaggccctccaggctagcctgagcagtgct
gcttcacccaacagtgagaccctgcgcaaggtggagcgaggttcacgtattgtcatcgtt
gttccccaggacacaaaggtggtgttgcagatgccaagaggaaatctggagaccattcac
caccgtgctctggttcttgcccagattcggaagtggctggacaggcttatgttcaaggaa
gcttttcagtgtatgaggaagctgcgaatcaacctcaatcttctctacgaccacaatccc
aaggtatttctggaaaacacagaaacctttatcaggcaaatagattctgtgaactatatc
aacttgtttgtcacagaactgaaagaagaagatttcacgaagagtatgtacccatctctg
aatggtagcagtaacagccagccaccccagcatcctgatcagaaaaaagtaaacctcata
tgtgatgtgatgagagttgccatggaacacattgaccctcaaaaatactgcctatcgata
ctgacagcacatgtgaagaaaagtcctccagagctggaaattgctctccagaaggttcac
aatcttcgagaaagtattacgcccaatgtccaagctgtgagtgcagaagaagcactaaag
tacctgcttttccttgtggatgtcaatgagttgtatgattattccttggggacgtatgac
ttcgatttagtcgttatggtggcagaaaagtctcaaaaggatccaaaagaatacttgccc
ttcttaaataccctccgaaagatggaaaccaattatcagagatatacaatagacagacat
ttgaagagatacacaaaagctcttggccacctcagcaaatgtggtcctgaacacttctct
gaattgctgaacttggtaaaggatcagaatctgtattctgaggccttgaagctgtacccc
tctagcactcaggagtacaaggatattagtgaagcatatggggagtatttgactcagaag
cagctgtatgaacaggctgcattgatatttgctcgtgctggcatctttgcaaaagcactt
gatgcttttcagagcagtggcagctggcagcaagccatgtgcatggcatcacggcttggt
tacacaaaggataagctgtccagcctggcacggagcatggcaggaaaactagttgaacag
agaaagtatgcagaggcagccattctcctggagcagtacactcaggactatgaagaggct
gttctcctgctcttagaaggggcattttgggaagaggctttgagactgattcacaagtat
ggtaggctggatatcttggaaaccaacttgaaacctgctattttggaagctcagaaaagt
cagctgatcttcctagattcccagaaaacagcatttcttcgccataaaagtcgcctgcaa
gtggtgcgagagctgaaggagaaggcttgtgagaacctgcaggattatgaagtaccaaat
tgcccagaatcggagcttttctctgaaaccagcagtgttgtgacagccagtgacatgaac
agcaaatacacacacagcaattcaagaatatcagcgcgatcctcaaagaaccgacgcaag
gcggagcgtaagagatacagcctgaaggaggggagtccttttgaggatattgcccttctg
gaagtcctgggagagagtgttcgtgctgttgagactgtgaaaggagagatacacatcctt
ctgaagcagcttgtgctctttggttatgatgagcaagctggggcactgcagcaagtcctg
gaagaggttttgcagttgatggtggcctcagtcccagaaatctggactccagacctgcag
cagagctctgtcagcctggtattgggacccaattcaactgcaaacagcattacggctgct
tatcagcaaaagaggatgatgccttctgctgtacaagatccagaagtactgactccacca
aaattcaataaaaatctacagtggaagctgcatcttctccagtaa
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