Lonchura striata (white-rumped munia): 110474051
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Entry
110474051 CDS
T05897
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03013
Nucleocytoplasmic transport
lsr03015
mRNA surveillance pathway
lsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110474051 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
110474051 (NCBP1)
03015 mRNA surveillance pathway
110474051 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110474051 (NCBP1)
03041 Spliceosome [BR:
lsr03041
]
110474051 (NCBP1)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
110474051 (NCBP1)
Spliceosome [BR:
lsr03041
]
Common components
Common spliceosomal components
Cap binding complex
110474051 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
ApoA-II
Motif
Other DBs
NCBI-GeneID:
110474051
NCBI-ProteinID:
XP_021392797
LinkDB
All DBs
Position
Z:complement(26789171..26820185)
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AA seq
794 aa
AA seq
DB search
MSRRRHSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSLPWVG
KELYEKKDAEMDRLLSQAESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQKLKK
DRWQERHILRPYLAFDSVLCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFGILKDVPNPNQDDDDGEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKELEE
TKARLARQHKRRDSDDDDDDDDRSTDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgacagcgatgggcagccccacaagagacggaggacg
tccgagccgtcggaaattgaggagaggctcgagtcgctcatctgcagggtgggagagaag
agtaattcatctttggagagcaacctggagggcctagctggtgttttggaagctgatctg
ccaaattacaaaagcaagatactaagaatactgtgtactgttgcacgtctgctaccagaa
aagcttactgtttacacgacattggtgggcttgctgaatgccaggaactacaattttggt
ggggaatttgtagaagccatgattcgtcagcttaaagaatgtctgaaagtaaacatgtat
aatgaagctgtgcatttagtacgttttctgtccgatctcgtgaattgccatgtaatagct
gcaccttcaatggtagctatgtttgagaactttgtgagtgtgacacaggaggaggatgta
ccccaggtgcgatgtgactggtatatgtttgcatttctgtcatctttgccttgggttgga
aaggaattatatgagaagaaggatgctgaaatggatcgtctcttgtctcaggcagaaagt
tatctgaaacgccgccagaagattcatgtacccatgctgcaagtgtggactgctgacaaa
ccacatccacaagaagagtatttagactgcctttggtctcaaattcagaaattgaagaaa
gaccgttggcaggagcggcatatcctgaggccctacttggcttttgacagcgttctctgt
gaggcactgcaacacaatctgcctcccttcacacccccacctcacactgaagattctgta
tacccgatgccaagggttatttttaggatgtttgactacacggatgaccctgagggtcct
gtcatgcctggcagccactctgttgagagatttgtaatagaggagaacctccactgcatc
atcaaatctcactggaaagagagaaagacttgtgctgcacagctgttgagctatccagga
aataacaagatccctttgaactaccatatagtagaggtaatatttgcagagttgtttcaa
ctgccgtctccaccacatatagaagtcatgtacacaacactgctgattgagctgtgcaaa
cttcagcctggctccttaccacaagttcttgcacaagccacagaaatgctctacatgcgt
ttggacacaatgaatacaacatgtgtggacagatttattaactggttttcgcaccacttg
agcaactttcagttccgttggagctgggaagactggtcagattgtcttacccaggacctt
gaaaaacccaaacccaaatttgtgagagaagttttggaaaagtgcatgagactctcctac
catcagcgaataatagacattgttcctgcaagtttttctgtcctcagtcctgctaatcca
gtgtgcatttacaaatatggagatgagagcaataggtctcttcctggatatactgtggca
ctctgtttaacaattgcaattaaaaacaaggccagtaatgatgaaatctttggcatttta
aaagatgtacctaatccaaaccaggatgatgatgatggtgaaggatttactttcaaccct
ctgaaaatagaagtctttgttcagactctgctccatctagctgcaaagtcttttagccac
tccttcagcgccctggcaaagtttcatgaagtcttcaaaacacttgctgaaagtgatgag
gggaagcttcatgttctgagagttgtgtatgaggtttggaagaatcatccacagatgatt
gctgtgctcgtggacaagatgattcggacgcaaattgttgactgtgctgcagtagcaaac
tggatcttttcttcagagctggcacatgactttaccaggttttatatctgggagatctta
cattccacaatccgtaagatgaataagcatgtcctgaagattcacaaagaattggaggag
accaaagcaagattggccaggcagcacaaaagacgagacagtgatgatgatgatgacgat
gatgaccgaagcactgatcgggaagatggaccgctggaagagcagatagagcgcttgcag
gaaaaagtagagtcagcccagagtgagcagaagaatctctttcttgttatattccagcgt
ttcattatgttgttaacggagcacttagtgcgctgcgagactggtggaattgatgtattt
acaccctggtacaagagctgtatagagaggttgcagcagatcttcctgcagcaccaccag
ataatccagcagtacatggtgacactagagaacctcctgtttacagctgaactggaccac
cacatcctggctgtgtttcagcagttctgtgctctgcaggcttga
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