Lonchura striata (white-rumped munia): 110474059
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Entry
110474059 CDS
T05897
Symbol
BDP1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog
KO
K15198
transcription factor TFIIIB component B''
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110474059 (BDP1)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
110474059 (BDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
110474059
NCBI-ProteinID:
XP_031363322
LinkDB
All DBs
Position
Z:complement(27432983..27484360)
Genome browser
AA seq
2347 aa
AA seq
DB search
MFRRARLTVRPNVRPPGRAAAAGAVDPEPAEPPGSDIPAADGAGTAAESTGARREESDDK
ADNTSGTGEASKPAEMLTQRRKRISTMPNLVKPRAGPSSAQRSAPKPQRRTSQASDGIAS
LHKDPSPSEKSNVESSVKSPMLPEKKTPVPQVPQFSPLKKSVNKDQTVGVAAQKNDDSLQ
KSVPSPLKERPTQERSQTQEEKLPVKPSEKVKQTCSDHERILKARKLREMLKEELKKERM
KLKHRPPVIEGRSPPDRSKMTMRDLIYYLPENNPMKSSLVEEKRTERSSALSQMKEQEEK
STLDHEEEEEEEEENGEESQDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEEN
DPIFERGSTTTYSSFRKSFYTKPWSNKETDMFFLAISMVGTDFSLIGQLFPHRARAEIKN
KFKREEKANGWRIDKAFKEKRPFDFEFFAQLLEKVLADEGKRKQKSVKSQKPKEKKSPRP
QKKSKAKAASTEAANDRDELQEAEISDAETETDGVTAEKENEESLGISEQAEEEVALEPA
LAKKRKRKRKDDLEQEVENISEELPVPSKTAEERKSSNKRKKVIHDASSDGDTTCENEVD
CAIEGKQNESAVTEEERSESCSPVNNQMEREGGVNLCSLEDSNDALEAEPAKLRSRDITD
DASRESHTPELPVSNIRSKETECVETTESKTEDTAHSQKIDGKQSTSECGSYSEIMKTEK
SADRRRLQRPKPNLVRSLGRTETATQEKRGARTTSPTRANAGEKCSEEESRRNKNEVKEV
DNRDLDTASQEPEKTAIANTIVRGYRHRFKPNVTRASGRKEEPEKDEGNDKISHLQPNEE
TEKNNDQGNRSGDTSEDTAEKDTKVMETMSQSNETAGLKEDRKQIVLNQTPLKRGKIQRP
KPNLGRTVARHKELIDEKDPEEETTEGGEAEKGITHHGDEDNDSCLKSDLTVHEGTQPSS
VMLDDVSADSEMNSNTRQCFQEKSSEAESNESEKGLSDVSRQVSDYSTRESHPQKKEEKT
VVSSAWPLRMRFQRPKPNLRTTSRKEVLDVNSKSASQKVTNKEESLTECDSECSIIPPDT
DKAGKCEVLNALESLGKEKSLCSQQVSERPCFKSPKTFSRPEDGELEFCLPEISQDDISA
TIAVAQEERQYAPLPRIQLARNKRYKPNLVRTIGKQELQISESESKKKPEAQQRDEFDNT
VMNENEAVLCEAGVLSKEEQEQQEVLSISETLLSEQSRFSSTEKFTSQEDKLSALKPGKP
VRIESPRARPNLERTYSKKGFPVVQKLTAPDEEGMNQGEHLPLAEESENLLSSKDDMEVL
LLVRNLDKNDNLDTNSRTITSGSLCSKKSPNYNSKREQEECLSTDAIGSIQDTTERSSDK
LSSGEESEQTARESPWNPRPDLLRLTRKRDYTEECENREEDNPERNEEFLLLLKTCASGE
NSSNTVEARSFLEATRKHNFAENVEEKSHKRIREDITLQSSGISSESERHVEQDNDSQLS
NLQEKRSDSLTRRQFRRSSKQTALPEHVLEPKPATSSASECEADCSEKGRQRQEAKLSVT
RDKSLKTTQGRKSGKEPRSSKITFVTLRASQEEEDDEADDFELDDEDECFASEEVNKAPA
FVPIGLRSPKPVPVQIQETVEELEIPVNIPDVEVAAYAESLSCASIQPVVQREEESTSTC
ETIIHENPDVDKGINDGSTEAAMTLLAMGDPNFQLKTSTEEQTHMLPAQNYLDTAHSLVI
HTYSKENRTSCQYLLASDTSIKELLPSEDGSNINVDHQITGTKIGVEEYSEMDATDTSGS
SLPVVNMRLTGGGCLESEPTSAILRSSENIMLEILNANVLVEQLEQIQTDPVTLRDNAEM
QKVKPEHTRPAASDSSVIHDFASRSMEPTKQADKSERTEKQVRDACGNSGDLRHLTASPK
PEKSHLGLEDCPNPSSGEELSEQSPYPLEHRICTANFTQNEAYTQDAQQRCISGTEESSV
VNDDNGRPEEEQTFILTLVEIPAGSKELDASAMVEQTSEPVLPAPILISPINASEITVAE
VESVGSLTTAANKVPRPLNNTMEAKQLESAVDPVPKLQTAQKRLAAELEENYFPPSKKTL
STVAVENSLETTYKGYSIKSTDVPVVTSGNLFQKTESSAKEKVLTSVLVSESISQLAETN
QLEILESLRKAPLENAASEKEEEAMSRLTSNRRAEISGQGKQENVRESAQLEHTRSLASF
SKTPLLRGGRKPLGFLSLICKKSNSESAEDSKGNRGKIQKPRIVTPKPSLKKPTPPTKDE
RDSCSFPSTSSSVEHEHVATDAAVTVPSNSSSEKQPLCAKDQEKEGEPTKISEYFFSDIF
MEVDDSE
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atgttccggcgggcccgtctcaccgtgcggcccaacgtgcgccccccgggcagagccgcc
gccgctggcgcggtggaccccgagccggcggaacccccaggctcggacatcccggcggcg
gacggagcagggaccgcggcggaatcgacgggcgcgcggcgggaagagagtgatgacaag
gcagacaatacaagtggcactggggaagctagtaaacctgcagagatgcttacacagaga
agaaaacgcatctccaccatgccaaatcttgtcaaacccagagctggaccatcgtctgct
cagcgttctgcaccaaaaccgcagaggcgaacatcacaggcttctgatggtattgcttca
cttcataaggatccctccccatcagaaaagagtaatgttgaaagctctgtaaagtctcct
atgctgcctgagaaaaaaacacctgtgccacaagtgccacagttttcaccgctaaaaaag
tctgtgaacaaagaccaaactgttggtgtagctgctcagaaaaatgatgatagcttgcag
aagagtgtaccttctcctcttaaggagagaccaacacaggaaagatcacaaacacaggag
gaaaagctacctgtgaaaccttctgagaaagtcaaacaaacatgttctgaccatgaacgg
atcctcaaggctcggaaattgagagaaatgctcaaagaagagctgaagaaagagcggatg
aagttgaaacacaggcctccagtaattgaaggacgttctccaccagaccgttctaaaatg
accatgagagacttaatatactatctgccagaaaacaatcctatgaagtcttcactggta
gaagaaaagagaacagaaagaagttctgcactgagtcaaatgaaagaacaggaagagaaa
agtactcttgatcatgaagaagaggaggaggaggaagaagagaatggggaagagagtcag
gatggcccacttctcgttcctcgtgtgaaagtagcagaagatggttcaatcattctggat
gaagaaagcttaactgtagaagttttaagaacaaaaggtccatgtgttgttgaagaaaat
gatcccatctttgagcgtggctctacaactacatattctagcttcaggaaaagtttttac
acaaaaccgtggtcaaataaagaaacagacatgttctttttagctatcagtatggtagga
acagacttctccttgattgggcagctatttcctcatagagccagagcagaaattaagaac
aagttcaaacgtgaggaaaaagctaatggatggagaatagacaaagctttcaaagaaaaa
cgaccctttgattttgaattctttgcccagctgcttgagaaggtcttagcagatgaggga
aagaggaagcaaaagagtgttaaaagccagaagccaaaagaaaaaaagtctccaaggcca
cagaagaagtcaaaagcaaaagctgccagcacagaagctgctaatgatcgagatgaactt
caggaagctgaaatttctgatgcagaaacagaaacagatggtgtgacagctgagaaagaa
aatgaggaatctttgggcatttctgaacaggcagaagaagaggttgcattagagccagca
ttagcaaaaaagagaaagagaaagagaaaagatgatcttgaacaggaagtggagaatatt
tcagaagaactgcctgttccttcaaaaactgctgaagaaaggaagtcctctaataaaagg
aaaaaagtgatacatgatgcaagtagtgatggtgatactacctgtgaaaatgaagtggat
tgtgctattgaaggaaagcaaaatgagagtgctgttacagaggaagagagatcagagtcc
tgttcaccagtgaataaccaaatggagagagaaggtggtgtcaatttatgcagccttgaa
gatagcaatgatgcactagaagcagaacctgctaaattgagaagcagagatattacagat
gatgcatcacgggaaagccacactccagagttaccagtctcaaatattagaagcaaggaa
acagaatgtgtagaaactacagaatcaaagactgaagatacagctcactcacaaaaaata
gatggaaagcagagtacatcagaatgtggttcatactctgaaatcatgaagactgaaaag
tcagcagatagaaggcgtttgcaaagacctaaaccgaatttagtaagatcattgggaagg
acagagacagcaacacaagagaaaaggggagccagaactacttctccaacccgtgcaaat
gcaggtgaaaagtgctctgaagaggagagtagaagaaataaaaatgaagtcaaagaagtg
gataacagggatttggatactgcatctcaagaacctgaaaaaactgcaattgcaaacaca
atagttagaggatatcgacacagatttaaacctaatgttacaagagcatctggaaggaaa
gaagagcctgaaaaagatgaaggaaatgataaaatatcccatctacagcctaacgaggaa
actgagaagaataatgaccaaggtaatagatctggtgataccagtgaagatactgcagaa
aaagataccaaagtcatggagacaatgtctcagtctaatgaaacagctggtttaaaagaa
gataggaaacagattgtgttgaatcaaacacctctaaaaagaggtaaaatacagagacca
aaaccaaatctaggaagaactgttgcaaggcataaagaactgatagatgaaaaagatcct
gaagaggagacaactgaaggtggagaagcagaaaaaggtatcacacaccatggagatgaa
gacaatgattcctgcttgaaaagtgatttaacagttcatgaaggcactcagccatcgagt
gtgatgttagacgatgtttctgcagattctgagatgaactcaaatacaagacagtgtttc
caagagaagtcctcagaagcagaaagcaacgaaagtgaaaagggactgtcagatgtctcc
agacaagtttcagattatagtacaagggaatctcatccccaaaagaaagaggagaaaact
gttgtatcatcagcttggccactgaggatgcgatttcagagaccaaagccaaatttaaga
acaactagtagaaaggaagttttggatgtcaatagtaaaagtgcatcacagaaagttacc
aacaaggaagaaagtttgacagagtgtgatagtgaatgtagcatcatcccccctgacaca
gataaagcaggaaaatgtgaagtcttaaatgcactagaatccttgggaaaagagaagtca
ctttgctctcaacaggtttctgagaggccatgttttaagtccccaaaaacattttcaaga
ccagaggatggtgaactggagttctgcctacctgaaattagccaggatgacatttctgcc
actattgcagttgctcaagaagaacgtcagtatgcacctcttccacgtattcagctggca
cggaacaagaggtacaagccaaacttggtaagaactattggaaagcaggagttacaaata
tcagaaagtgagagcaagaaaaagcctgaagcacagcaaagagatgagtttgacaatact
gtcatgaatgaaaatgaagctgtattgtgtgaagcaggtgtattgagcaaagaggaacag
gaacagcaagaggtgctctctatttctgaaaccttattgtctgaacaaagcagattcagt
agtactgaaaaatttacctcccaagaagacaagctgagtgctctgaaaccaggaaaaccc
gtaaggattgagtctccaagagctagaccaaatctggaaagaacatacagcaaaaaagga
tttccagtagtacaaaaacttactgccccagatgaagaaggaatgaatcaaggagagcat
ctgcctttggcagaagaatctgaaaaccttctctcctcaaaagatgacatggaggtattg
ttgcttgtgagaaatttggacaagaatgacaatctagatacaaattcaagaaccattaca
tcaggatcactttgttctaaaaaatcaccaaattacaacagcaaaagagagcaagaagag
tgtctatctacagatgctataggaagcattcaggataccacagaaaggtccagtgataaa
ttaagttctggagaagaaagtgaacagacagcaagggaatccccctggaacccaaggcca
gatctactgagacttactaggaaaagagattatactgaagagtgtgaaaacagagaagag
gacaatcctgagagaaatgaagagtttttgttgttattaaaaacatgtgcgtcaggggaa
aactccagtaatacagtggaagctagatccttcttagaagctacaaggaaacacaatttt
gcagagaatgttgaagaaaagtctcataagagaatcagggaggacattacactccagtct
tctgggatatcgtcagagagtgagagacacgtagaacaagataatgattctcagctttct
aacttacaggagaagcgttcagacagtctcacaagaaggcagttcaggagatcgtcaaaa
cagacagcactgccagaacatgtgttggagccaaaacctgctacttcttctgcctctgaa
tgtgaggctgattgcagtgagaaggggcgtcaaaggcaagaagctaaactgagtgttacc
agagacaaaagtttgaaaacaacacagggaagaaaatctgggaaggaacctagaagttca
aagataacctttgttaccctccgggcttctcaagaggaggaggatgacgaagcagatgac
tttgagcttgatgatgaagatgaatgctttgcatcagaggaagtaaacaaggctccagca
tttgttcctataggtcttcgatctccaaaaccagttcctgtgcagatacaggaaactgtg
gaggagttggaaatacctgtgaatatccctgatgtggaggttgctgcttatgctgaaagt
ctttcttgtgcttctatccaaccagtagtacagagggaagaagaaagcacctcaacatgt
gaaacaatcatacatgaaaatccagatgtggacaaaggaattaacgatggaagcactgaa
gctgctatgactttacttgcaatgggtgatccaaatttccagttaaaaacaagcactgaa
gaacagacacacatgttacctgctcaaaattacctggacacagctcatagccttgtaatt
cacacctactccaaagaaaatagaacttcttgtcagtatttgcttgcttcagatacttct
atcaaggaacttctgccttctgaggatggaagcaacatcaatgtagatcatcaaatcact
ggcacaaaaataggtgtagaagaatattcagagatggatgctactgataccagtggtagc
tctttgcctgtggtgaatatgagactgacaggaggtggatgcctggagtctgagccaacc
tctgcaatactgaggtccagtgagaacataatgctggagatacttaatgcaaatgtactt
gtggaacaactagagcaaattcaaactgatcctgtaacgctgagggataatgcagaaatg
cagaaggtaaaaccagaacataccagaccagctgcaagtgattcttcagttattcatgac
tttgcatctagaagtatggaacctaccaagcaagcagacaaatctgagagaacagaaaag
caggtaagagatgcttgtggaaattcaggagatttaagacatctgactgcatcaccaaaa
cctgaaaaatcacaccttggactagaagattgtccaaatccaagttctggggaagaactg
tctgagcagagtccttatcctcttgagcaccgtatatgtacagccaactttactcagaat
gaagcttatactcaggatgctcaacaacgttgcataagcggcacagaagaatcttcagta
gtgaatgatgataatggacgtccagaggaagaacagacattcattttaacattggtggaa
atcccagctggctcaaaagagttggatgcatctgctatggtggaacaaacttcagaacca
gtactaccagccccaatacttatcagcccaataaatgcaagtgaaataactgtggctgaa
gtggagagtgtgggatccttgacaactgcagctaataaggttcctagacctttaaacaac
actatggaagccaaacaactagagagtgcagtagaccctgttccaaagttgcagacagct
caaaaacggttggctgctgagcttgaagaaaattattttcctccttccaagaaaactcta
tctactgttgcagtggaaaatagcttggaaaccacttataagggttattcaattaaatcc
acagatgtgccagtggtaacttctgggaatctttttcaaaaaacagagtcttcagcaaag
gaaaaagtacttacttctgtattggtgtctgagtctatttcacaactggctgagacaaac
cagcttgagattttggagagcttacggaaagcaccacttgagaatgcagcatccgaaaag
gaagaagaggctatgtctagattaacctctaacagaagagcagaaataagtggacaagga
aagcaggagaatgtgcgtgaatctgcacagttggaacatactagaagcctagcatcattt
tcaaaaactccattactcaggggtggacgaaaaccactgggatttttatctttaatttgc
aaaaaaagtaattctgaatctgcagaagacagcaaaggcaatagagggaagatccaaaag
cctcgaattgtaacaccaaaaccaagtctaaagaaacccactccacccactaaggatgag
agggactcttgttcatttccctctacttcatcatctgtggaacatgagcatgtagctact
gatgctgcagttacggttccaagtaacagctcatctgagaagcaacctctctgtgctaaa
gatcaagagaaggaaggagaaccaaccaaaatctcagaatactttttcagtgacatcttt
atggaagtggatgattcagaatag
DBGET
integrated database retrieval system
