Lonchura striata (white-rumped munia): 110474100
Help
Entry
110474100 CDS
T05897
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04510
Focal adhesion
lsr04512
ECM-receptor interaction
lsr04810
Regulation of actin cytoskeleton
lsr04820
Cytoskeleton in muscle cells
lsr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110474100 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110474100 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110474100 (FN1)
04810 Regulation of actin cytoskeleton
110474100 (FN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110474100 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110474100 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsr04147
]
110474100 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
lsr00536
]
110474100 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110474100 (FN1)
Membrane trafficking [BR:
lsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
110474100 (FN1)
Exosome [BR:
lsr04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
110474100 (FN1)
Glycosaminoglycan binding proteins [BR:
lsr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110474100 (FN1)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
110474100 (FN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
Fn3_Dep-1_2nd
NDNF
FN3_Tor_3rd
fn3_2
Motif
Other DBs
NCBI-GeneID:
110474100
NCBI-ProteinID:
XP_021392896
LinkDB
All DBs
Position
7:2521042..2572583
Genome browser
AA seq
2302 aa
AA seq
DB search
MPGRTVWRLALLALCLGAAAAGGQRRGAGGKSRRQAQTQTTSLPQGTAAQGKQTCYDNGR
YYQINQQWERTYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGETYERPKD
SMIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEW
TCKPVAERCYDNTAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDHDTK
TSYRIGDTWSKKDNRGNLLQCVCTGNGRGEWKCERHTSLHTTSTGSGSPSITNVQTALYQ
PQPQQPQPQPYGQCITDNGVIYSVGMQWLKTQGSQQMLCTCLGNGVSCQEIAVTQTYGGN
SDGEPCVLPFTYDGRTFYSCTTEGRTDGHFWCSTTSNFEQDRRYSFCTEQNVLVQTRGGN
SNGALCHFPFLYNNRNYTDCTSEGRRDNMKWCGTTENYDADQKFGFCPMAAHEEICTTND
GVMYRVGDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDVNQTFHKR
HDEGHMLNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKYVHGVRYQCYCYGRGI
GEWHCQPLQTYPGSAGPVQVIITESTNQPNSHPIQWNAPERSHITQYILRWRPKNSGRQW
KEATIPGHRNSYTISGLKPGVIYEGQLISVQQYGHKEVTRFDFTTTSTTAVTSNTVSGET
TLLPPVVATSESVTEITSNSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSV
NIPDLLPGRKYIVNVYQISEEGEQNLILSTSQTTAPDAPPDHTVESVDDTSIVISWSRPQ
APITGYRIVYVPSVEGSSTELNLPDTATSVTLSDLMPGVQYNISIYAVEENQESTPVFIQ
QETTGVPRTDEVPSPRDLQFVEVSDIKITIMWTPPQSQVSGYRVEVIPVNRPGQHGQRLP
ITRSSFAEVIDLIPGTTYLFKIFAVNQGRESKPLTGEQTTKLDAPTNLRFLNTTEHSVLV
LWTRPRAVITGYKLTAGPTRGGQPRTYNVGPSATKYLLRNLQPGTEYTVYLVAVKGDLQS
NRETGVFTTYQPAGSVPPFNTEVTETSIVITWTPAPRIGFKLGVRPSQGGEAPREVISDS
GSIVISGLTPGVEYTYSLTVLMDGQERETPIVRRVTTPLAPPTGLRLKSNPDTGILIVSW
ERSTSPGISGYRVTTAPTDGQQGSTLEEVVGADQTTCTFENLNPGVEYNVSVYSVKDDQE
SVPISETITPAVPPPTDLRFTNVGPDTMRVTWTAPTSIVLSGFLVRYSPAKKEDDVAEVT
VSPSDNMVILTNLLPGTEYLVRVYSVSEQHESAPLYGIQKTGLDSPTGLDFSDITANSFT
VHWIAPRATITGYRIRYQPEQGGARPKEDRVPPSRNSITLTNLLPGTEYVVSIVAMNGRE
ESLPLVGQQTTVSDVPRDLEVTPTSPTSLKISWDAPAVTVRYYRITYGETGGSSPVQEFT
VPGTVSTATITGIKPGVEYTITVYAVTGRGDSPASSKPVTVTYRTEIDTPSQMQVTDVQD
NSISIRWLPSTSPVTGYRVSAVPKNGHGPSKTKHVPADQTQVTIEGLQPTVEYTVSVFAQ
NQNGESQPLVQTAVTTIPPPTNLKFTQVTPTSLTINWNAPNVRLTGYRVRVNPKEKTGPM
KEINLSPDSTSAVVSGLMVATKYEVSVYALKDSLTSRPAQGVVTTLENVSPPRRPRVTDV
TETTITITWRTKTETITGFLVEAVPAGGQNPIQRTISPELRSYTITGLQPGTDYKIYLYT
LNENARSSPVVLDASTAIDAPSNLRFLTTTSNSLLATWQPPRAKITGYIIRYEKPGSPVK
EVLPRPRPGTTEATITGLEPGTEYIIYIIAVKNSQKSEPLVGRRRTDDLPTLISRPHPNQ
PDILDVPSIDEGTPYLTNNRYDNGNGIQLPGSSGHPQTVGHQGQQVFFEEHGYRRPGPTT
ATPLRPGSRQPLPSVDEAIEIPGYQVPIVVEPSYPHSRGPRRNDSAGQEALSQTTISWRP
LLESSEYIISCQPVSQDEDTLQFRVPGTSSSATLKGLTRGATYNIIVEALKDHRRQKVLE
EVVTVGNTVSEGLNQPADDTCFDTYTGSFYSIGEEWERLSETGFKLWCQCLGFGSGHFRC
DSSKWCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCEPHETTCYDDGKMYHVG
EQWQKEYFGAICSCTCYGGQQGWRCDNCRRPSVEVAPEGSAGHTYTQFTQRYHQATNTNV
NCPIECFMPLDVQADTQQPRGK
NT seq
6909 nt
NT seq
+upstream
nt +downstream
nt
atgccgggccgcaccgtgtggcggctggcgctgctcgccctctgcctgggggccgcggcg
gcggggggacagcgccgcggagccggcggcaagagccggcggcaggcgcagacccaaacc
acctcgctgccgcagggcaccgccgcgcagggaaagcagacctgctatgacaatggacgg
tactatcagataaaccagcagtgggagcgcacttacctgggaaacactctggtctgtacc
tgctacggtgggagccgagggttcaactgcgagagcaagcccgaacctgaagagacctgc
tttgacaaatacactggatccacttaccgggtcggggagacctatgagcgccccaaggac
tccatgatctgggactgtacttgcattggagctggacgtgggagaatcagctgcaccatt
gccaaccgctgccatgagggcggccagtcctacaagatcggcgacacgtggcgccggccg
cacgagacgggcggctacatgctggagtgcgtgtgcctgggcaacggcaagggcgagtgg
acctgcaagcccgtggccgagcgatgctacgacaacacggcggggacgtcctatgtggtg
ggagagacatgggagaagccctaccagggctggatgatggtggactgcacctgcctcggt
gagggcagcggccgcatcacctgcacctccagaaatcgctgcaatgaccacgacaccaag
acttcctacaggattggagacacctggagcaagaaggataaccgtgggaacctgctgcag
tgtgtctgcactggcaacggcagaggcgaatggaagtgtgagagacacacgtccctgcac
accaccagcactggctctggctcccccagcatcacgaacgtgcagacagcgctgtaccag
ccccagccgcagcagccgcagccccagccctacggccagtgcatcacggacaacggtgtc
atctactcggtgggcatgcagtggctcaagacacagggtagccagcaaatgctgtgcacc
tgcctgggcaacggagtcagctgccaggagatagctgtgacccaaacgtatggtggcaat
tctgatggagagccctgtgtcctgcctttcacctatgatggaaggactttctattcctgc
accaccgaaggccgcacggatgggcacttctggtgcagcaccacttccaactttgagcag
gacaggagatactccttctgtactgagcagaatgttttggtccagacacgtggtggcaat
tccaatggtgctctgtgccacttccccttcctgtataacaaccgcaactacaccgactgt
acttctgagggacggagggacaacatgaagtggtgtggaaccactgagaactacgatgct
gaccagaagtttgggttctgccccatggctgctcatgaagaaatctgcacaaccaatgat
ggtgtcatgtaccgtgttggggaccagtgggataagcagcatgacatgggccacatgatg
agatgtacttgtgtaggaaatggccgtggagaatggacctgcattgcctattcacagctc
agagaccagtgcattgtggatggcatcacctacgacgtgaaccagaccttccacaagcgc
catgatgaggggcacatgctgaactgcacctgctttggccagggccgggggagatggaag
tgtgatcctgttgaccagtgccaggactcagaaacccgcaccttctaccaaattggagac
tcctgggagaagtatgtccatggggtcagataccagtgctactgctatggtcgtgggatt
ggagaatggcattgccagcctctgcagacctacccaggctcagctggacctgttcaggtg
atcatcacagagagtacaaatcagccaaactcccaccccatccagtggaatgctcctgaa
cgatctcacatcacccagtacatcttgcgctggagacctaaaaactcaggaaggcagtgg
aaggaagccactatccctggccacagaaactcctacaccatctcaggcctgaagcctggt
gtgatttatgagggacagctcatcagtgtccagcagtatggccacaaagaagtcacccgc
tttgattttaccaccaccagcaccacagcagtgacaagcaacactgtttcaggagagaca
actcttcttcctcccgtggttgctacttcagaatctgtcactgaaatcacatccaacagc
tttgttgtctcctgggtttctgcttctgacaccgtttctggattccgtgttgagtatgag
ctgagcgaggagggtgatgagccacagtaccttgatcttccaagcacagccacttctgtc
aacatccctgacttgcttcctggtcgcaagtatattgttaatgtctaccagatttctgaa
gaaggagagcagaatctgatcctgtctacttcacagactacagctcctgatgcaccacct
gaccacacagtggaaagtgtggatgacacatccattgtcatcagttggagcagaccacag
gctccaatcacaggctacaggattgtctatgtaccctctgtggagggcagcagcacagag
ctcaatctgcctgacactgccacctctgtgacactcagtgacctgatgccaggggtacag
tacaacatcagcatctatgctgtggaagaaaaccaggagagcactcctgtcttcatccag
caggaaaccactggggtcccacgcacagatgaagtgccttcccccagagatctgcagttt
gtggaggtttctgacatcaagatcaccatcatgtggaccccaccccagagccaagtgtcc
ggctatcgggtggaggtgatccctgtcaaccgccctggccagcacggccagagactgccc
atcaccaggagctcttttgctgaagtcattgacctgatcccaggaacaacctatctcttc
aagatctttgctgtaaaccagggcagggagagcaaacctttgactggagagcaaaccacc
aagctcgatgcccccaccaacctgcggttcctcaacaccacggagcactcggtgctggtg
ctgtggacgcggccccgcgccgtgatcacgggctacaagctgacagcagggcccaccaga
ggagggcagccccgcacctacaacgtgggaccctctgccaccaagtacctcctgaggaac
ctgcagcctggcaccgagtacaccgtgtaccttgtggcggttaaaggcgacctgcagagc
aacagggagaccggggtcttcaccacctatcagcctgctggctctgttcctcctttcaac
acagaagtgactgagacctctattgtcattacctggacacctgccccaaggattggtttc
aagctgggagtgcgcccaagccagggcggagaggctccccgcgaggtgatctccgactcc
ggcagcattgtcatctctgggctgacccctggtgtggagtacacctacagcctgacagtg
ctgatggatggccaggagagagagacccccatcgtcaggagagtcactacaccactggcc
ccaccgaccggcctgcgcctgaagtccaatcctgacactggcatcctgatagtctcttgg
gagagaagcacatctccaggcatcagcgggtaccgtgtgaccactgctcccacagatggg
cagcagggctctaccctggaggaggtggtgggtgcagatcagaccacctgcacctttgag
aacctcaaccctggtgtggagtacaatgtcagtgtctactctgtcaaggacgaccaggag
agtgtgcccatctcagaaaccatcacaccagctgtgcctcctcccactgacctgcgcttc
actaacgtggggcctgacaccatgagggtgacttggactgccccgacttccatcgtgctg
agcggtttcctggttcgctactcccccgccaagaaggaggatgacgttgcggaggtgaca
gtctcaccctcagacaacatggtcatcttaacaaacctgctccctggcactgaatatctg
gtgagagtctacagcgtttctgagcagcatgagagtgcacctttgtatggaatccagaaa
acaggtcttgattcccccactggcctggacttctcggatataacggcgaactccttcacc
gtgcactggatcgctcctcgtgccaccatcacgggctacaggatccgctaccagcctgag
cagggcggggcccggcccaaggaggaccgtgtgcccccctccaggaactccatcaccctc
accaacctgctgccaggcactgagtatgtggtcagcatcgttgccatgaacggcagggag
gagagcctacccttggttggccagcagacaacagtgtctgatgttccaagggacctggaa
gtcacccctaccagcccaaccagcctcaagatttcctgggatgctcctgcagtgacagtc
cgatactaccggatcacttatggtgaaacaggtggaagcagcccagtacaggagttcaca
gtgcctggcaccgtgtctactgccaccatcactggcatcaagcctggtgttgaatacacc
atcactgtgtatgctgtaactggccgtggagacagccctgccagcagcaagccagtcact
gtcacctacaggacagaaatagacacaccatcccagatgcaagtcaccgatgtgcaagac
aacagtatcagcatcagatggctcccttcaacatccccagtcacagggtatcgggtctct
gctgtccctaagaatggacatgggccctcaaaaacaaaacatgtccctgcagatcaaact
caagtcactattgaaggtctgcagcccaccgtggagtacacagtcagtgtctttgctcag
aatcagaacggggagagccagcccttggttcagacagctgtcaccacaattccacctcca
acaaacctgaagtttactcaggtaactcccaccagtctcaccatcaactggaatgcaccc
aacgttcgcctcactggctacagagtcagagtgaaccccaaagaaaagactggtcctatg
aaagaaatcaacctttctccagacagcacatctgcagttgtgtctggcttgatggtagca
accaagtatgaagtgagtgtgtatgccctgaaggactccctgaccagcagaccagcccag
ggggtggtcacaacccttgaaaatgtgagtccccctcgcaggccccgggtgacagatgtc
actgagacaaccatcaccattacctggaggaccaagactgagaccatcactggcttcctg
gtggaagccgtccccgcgggtggccagaaccccattcagaggaccatcagccctgagctc
aggagttacactatcactggcttgcagcctggcactgactacaagatctacctgtacact
ctgaacgagaatgcacgcagctccccggtggtactggatgcctccactgctattgatgct
ccttctaacctgcgcttccttacaaccacgagcaactccctgctggccacctggcagcct
ccccgagccaagatcacgggctacatcatcagatatgagaaacctggctcgccagtcaag
gaggtcttgcctcggccccggcccggcaccaccgaggctaccattactggtttggaacct
ggcactgaatacatcatctacatcattgctgtgaagaacagtcagaagagtgagccactg
gttggcagaagaaggacagatgatctccccactttgattagcagaccacaccccaaccag
cctgacatcctggacgtgccttccattgacgaggggaccccttacctcacgaacaacagg
tatgacaacggcaacggtatccaacttccaggctcctctgggcaccctcagacagtggga
caccaggggcagcaggtcttcttcgaggagcacggctacaggcggcctggacccaccaca
gccactcccctcaggccgggatccaggcagccgctgcccagcgtggacgaagccatcgag
atcccgggctaccaggtgcccatcgtggtggagccctcatacccgcactcgcgcgggccc
cggcgcaacgacagcgcggggcaggaggccctgagccagaccaccatctcctggaggccg
ctgctggagagctccgagtacatcatctcctgccagcctgtcagccaggatgaggacact
ctgcagttcagggttcctggcacttcctctagtgccacactcaagggtctcacaagaggg
gccacctacaacatcatagtggaagccctgaaggaccaccgaaggcagaaggtgctggag
gaggtggtcacagttggcaacactgtgtctgaaggattaaaccagccagctgacgacacc
tgctttgatacttacactggctccttctattccattggcgaggaatgggagcgcttatct
gaaactggctttaagctctggtgccagtgtttaggctttggcagtggccatttcagatgt
gactcttctaagtggtgccatgacaatggagttaactacaagattggggagaagtgggac
agacaaggagagaatggccagatgatgagctgcacctgccttgggaatggaaaaggagaa
ttcaagtgtgaacctcatgagaccacgtgctatgacgatgggaagatgtaccacgttggg
gagcagtggcagaaggaatactttggggccatctgctcctgcacttgttacggaggacag
cagggctggcgctgtgacaactgccgcaggcccagcgtggaggtggcccccgaaggctct
gctggccacacctacacacagttcacacagaggtaccaccaggccaccaacactaacgtc
aactgccccattgagtgtttcatgcccctagatgtacaggcagacacacaacagccacgg
ggaaagtaa
DBGET
integrated database retrieval system
