Lonchura striata (white-rumped munia): 110474206
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Entry
110474206 CDS
T05897
Symbol
NEDD4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04120
Ubiquitin mediated proteolysis
lsr04144
Endocytosis
lsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110474206 (NEDD4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110474206 (NEDD4)
09144 Cellular community - eukaryotes
04530 Tight junction
110474206 (NEDD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110474206 (NEDD4)
04121 Ubiquitin system [BR:
lsr04121
]
110474206 (NEDD4)
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110474206 (NEDD4)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110474206 (NEDD4)
Membrane trafficking [BR:
lsr04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110474206 (NEDD4)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
HECT type E3
110474206 (NEDD4)
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
110474206 (NEDD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
110474206
NCBI-ProteinID:
XP_021393079
LinkDB
All DBs
Position
10:7671115..7722829
Genome browser
AA seq
1302 aa
AA seq
DB search
MARRLRLHFATQRSNTDPLSETSEDFLDSNNCMYFKKSQSSAPSITQVKLIPRQAAYAPV
VQQVINQEKSTTVSSLQIKKSSSLHISLQSRKQNGCSRFGDVVAAGEDTSFIGIDSEGSC
GAGPVSDHRSNDSLLSSAALGRGSLSSIAASDSGSFSSAGSDYGSCASTTSDGGSYTNSI
ISDSGALWTSDSTFCGDSSCRSTANICNPSRSNSSQETLYRSNTTFDQDALSVRKKTKIP
LRRCSSLVIFPRSPSSTPPASPVSSGQLPHRGTYQTSHRLIISPSELAQKDDQTISKGFL
STAVNGLRLSKTVCSSGEVRDIRPLYLNASLQDKSQILNGPQQATCEEVPDGFSCVSLHL
TPRAFASSSEMVNGSCSPELNLNSGTKYPHLKLERSTSACLPSKTDSEYQININELGRLN
AQMSKTPHILQRSVSLEGSRQKVSCCLPSLKYKCHSARTSQLHIQFKAGNEGKTAGVRKR
YGTSKREISSTLWRPHKTRDDFLGQVDIPLYQLPTENPSMERPYTFKDFVLHPRSHKSRV
KGHLRLKMTYLPKNNGSEEETTEQAEELEPGWIILDQPEAASQPQQQQQESPPLPSGWEE
RQDILGRTYYVNHEFRRTQWKRPTAQDSVAVADLGSVQLEAQHVFTHRRQISEDTENTDN
RDSPESWEIITEDEATMYSSQNAQMPLSQSSCDIQSHLAEELNNRLTTSGSPATGQSTAN
TNHSSRRGSLQTYRLEEQPAHPVLLPTSSGLPPGWEERQDEKGRSYYIDHNSRTTTWIKP
VVQIAAETSQVSAAQSIPIGRQPQATSSDSSQQSSQQQPEMEQGFLPKGWEVRHAPNGRP
FFIDHNTKTTTWEDPRLKISAHPRRKTSLDPVDLGPLPPGWEERTHTDGRIFFINHNTKR
TQWEDPRLQNVAITGPAVPYSRDYKRKYEFFRKKLKKQSDIPNRFEMKIHRTTILEDSYR
RIIAVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTL
QINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITLHDMESVD
SEYYNSLRWILENDPTELDLRFIVDEELFGQTHQHELKSGGSEIVVTNKNKRDYIHLVIQ
WRFVSRVQKQMTAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVADWKLHTKYKNGY
NINHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTVEQWGTP
EKLPRAHTCFNRLDLPPYDSFEDLWDKLLLAIENTQGFDGVD
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacggttaagattgcattttgctactcaaagaagcaacacagacccattatca
gaaacctctgaagattttttggatagtaataattgtatgtacttcaaaaaatcacagagt
tctgcacctagcattacacaagtgaaactgattcctagacaagctgcttatgcacctgta
gtgcaacaagtaattaatcaagagaaaagcacaactgtttcttcactgcaaataaaaaag
agcagttcattgcacatttccttgcagtctaggaagcaaaatggatgttctaggtttggt
gatgtcgtggctgctggtgaagacacttcattcattggtattgatagcgaagggagctgt
ggtgctggacctgtgtctgaccatcgatctaatgacagccttctgagcagtgctgctctg
ggcagaggcagcctcagcagcattgcagcaagtgacagtggctcgttcagcagtgctggc
agtgactatggatcatgtgcaagtaccacaagtgatggaggttcatatactaacagtatc
atcagtgacagtggcgctctttggacaagtgacagtactttctgtggtgactcttcatgt
agaagcactgcaaacatatgtaatccctccaggagcaactcatctcaggaaacactgtac
agaagtaatactacttttgaccaagatgctttgtcagtgagaaagaaaactaaaattcca
ttgcgacgttgttcgtcactggttatttttcctaggagtccttccagtacccctccagct
tctccagtgagctcaggtcaactaccacacagaggcacctatcaaacatctcatagatta
attatttcgcctagtgagctagcacaaaaagatgatcagaccatttctaagggattcctt
tcaacagcagtcaatggacttagactgtctaaaacagtttgctcttctggtgaggtcaga
gacatccgaccgctttatttgaatgcatcattacaggacaaaagtcaaattttaaatggt
cctcagcaggcaacttgtgaagaagtacctgatggcttctcatgtgtttcacttcatctt
acaccaagagcatttgcatcaagcagtgaaatggttaatggctcttgcagtccagagtta
aatctgaactctggtacaaaataccctcatttaaaactggaacgtagcacatctgcatgt
ctgccctcaaaaacagattcagaatatcagattaatataaatgaactaggaagactgaat
gcacagatgagcaaaactccccatattttgcaaagaagtgtttccttggaaggatcacgt
caaaaagtttcttgctgcttacccagccttaaatacaagtgtcacagtgcaaggacgtct
cagttgcacatacagttcaaagctgggaatgaaggaaaaacagctggtgttaggaaaaga
tatggaacctctaaaagggaaatctctagcactttgtggaggccccataagactcgagat
gattttcttggacaagtggatattcctctttatcagttaccgacagaaaatccaagtatg
gagagaccatatacatttaaggattttgttcttcatccaagaagccataaatcaagagtt
aaaggccacctcagattaaaaatgacttacttacctaaaaacaatgggtctgaagaagaa
accacagaacaggctgaagaattagagcctgggtggattatattggaccaaccagaagct
gctagccagccacaacagcagcagcaggaatctcctccactgccttcaggctgggaagaa
agacaagacatcctcggcaggacctactatgtcaatcatgaattcagaagaacacagtgg
aaaagaccaactgcacaggacagtgtggctgtggcagatcttggcagtgtgcagctggag
gcccagcacgtgttcactcaccggcgacagatatccgaggatacagagaacacagacaac
agagattcccctgagagctgggaaattataactgaagatgaggcaacaatgtacagcagt
cagaatgctcaaatgcctctctcgcagagtagctgtgatatacagagtcatcttgcagaa
gaattgaataacagacttactacctctggaagtccagctactggccagtcaacagccaac
actaaccattccagcagaagaggtagtctgcagacatacagacttgaagagcagcctgca
catccagtgttactgcctacttcatctggattacccccaggctgggaagaacgacaggat
gaaaaaggaaggtcgtattatatagatcacaattctagaaccactacctggataaaacca
gttgtacagattgctgcagaaacaagtcaggtgtcagctgcacaaagtattcctatagga
agacagccacaagcgacatcaagtgattcatcacaacagtcttctcagcagcagcctgaa
atggagcaaggatttctccctaaaggctgggaagtgcgacatgcacccaatgggagacca
ttctttattgaccacaataccaaaactacaacatgggaagatccaagactgaaaatttct
gctcatccgaggagaaagacttccctagatccagttgacctgggtccattaccaccaggg
tgggaagagagaactcacactgatggaagaatattcttcataaaccacaatacaaagaga
acacaatgggaggatcctcgactgcagaatgtggcaataactggaccagctgtgccttac
tccagggactataagcggaaatatgaatttttcagaaagaaattgaagaaacagagtgat
attccaaataggtttgaaatgaaaattcatcgcacaacaatccttgaagattcttacaga
agaatcatagctgtaaaaagagcagatttccttaaagcaagactttggattgaatttgat
ggtgaaaaaggtttagactacggaggagttgctagagaatggttcttccttctctctaaa
gaaatgtttaatccttattatggattgtttgaatattcagctacagataactatactctg
cagatcaatccgaactccggactttgcaatgaagatcatctctcttatttcaagtttata
ggtcgtgtggctggaatggctgtttaccatggcaaacttttggatgccttttttattcgt
cctttttacaagatgatgctccaaaagccaataacactacatgatatggaatctgtggat
agtgaatattacaattctctgagatggattcttgaaaatgatccaacagaattggacctc
agattcatagttgatgaagaactttttggtcagacccatcagcatgaactgaaaagtggc
ggatcagaaatagttgtgaccaacaagaacaagagagactacattcatcttgtaattcag
tggagatttgtgagccgagtacagaaacaaatgacagcctttaaagagggcttttttgaa
ctaataccacaggatctgattaaaatttttgatgaaaatgagctagagttattaatgtgt
ggactgggagatgtggatgtggctgattggaagctacacacaaaatacaaaaatggctac
aacataaaccatcaagtaatacagtggttctggaaggcagtcttaatgatggactctgaa
aagagaataagattacttcagtttgttactggcacatcacgtgttcccatgaatgggttt
gctgagctgtatggttcaaatggaccacagttgttcacagttgaacagtggggtacccct
gaaaaactgccaagagctcatacttgctttaatcgcttggatttgcctccatatgactcg
tttgaagatttatgggataaacttcttctagcgattgaaaacactcagggttttgatggc
gttgattaa
DBGET
integrated database retrieval system
