Lonchura striata domestica (Bengalese finch): 110474220
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Entry
110474220 CDS
T05897
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110474220 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110474220 (MYO5A)
04131 Membrane trafficking [BR:
lsr04131
]
110474220 (MYO5A)
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110474220 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsr04812
]
110474220 (MYO5A)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110474220 (MYO5A)
mRNA cycle factors
P-body specific factors
110474220 (MYO5A)
Membrane trafficking [BR:
lsr04131
]
Others
Actin-binding proteins
Myosins
110474220 (MYO5A)
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
110474220 (MYO5A)
Cytoskeleton proteins [BR:
lsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
110474220 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
HTH_17
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
110474220
NCBI-ProteinID:
XP_021393108
LinkDB
All DBs
Position
10:8683455..8783026
Genome browser
AA seq
1830 aa
AA seq
DB search
MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKFLQLRLEDGKDLEYSLDPKTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGVD
DAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCTVPPKHEPLTIF
CDLMGVEYEEMSHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVN
KALHATVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDSWAQKLYNTHLNKCALFEK
PRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIRVLKSSKKFKLLPELFQDEEKVL
SPTSATPSGRVPLSRMPVKPAKARPGQASKEHKKTVGHQFRNSLHLLMETLNATTPHYVR
CIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQRDV
LGDRKQTCKNVLEKLIQDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRG
WLMRKKYMRMRKAAITIQRHVRGYQARCYAKFLRRTRAAITIQKFQRMYVVRKRYQCMRD
ATIALQALLRGYMVRNKYQMMLREHKSVVIQKHVRGWLARRRYRRTLRAVVYLQCCYRRM
MAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYST
ETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQSEKKSIEERADKYKHE
TEQLVSELKEQNSLLKTEKEELNRRIHDQAKEITESMEKKLVEETKQLELDLNDERLRYQ
NLLNEFSRLEERYDDLKDEMNLMVSIPKPGHKRTDSTHSSNESEYTFSSEITEAEDLPLR
MEQEPSEKKAALDMSLFLKLQKRVSELEQEKQSLQDELDRKEEQALRAKAKEEERPPIRG
AELEYESLKRQELESENKKLKNELNELQKALTETRAPEVTAPGAPAYRVLLEQLTSVSEE
LEVRKEEVLILRSQLVSQKEAIQPKEDKHTMTDATILLEDVQKMKDRGEIAQAYIGLKET
NRLLESQLQSQKKSHENELESLRGEIQSLKEENNRQQQLLAQNLQLPPEARIEASLQHEI
TRLTNENLDLMEQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVN
IPRKEKDFQGMLEYKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLND
DQKVRSLLTSTINGIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQ
NEHCLTNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTG
LRKRTSSIADEGTYTLDSIIRQLNSFHSVMCQHGMDPELIKQVVKQMFYIIGAVTLNNLL
LRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAE
AICSMCNALTTAQIVKVLNLYTPVNEFEERVLVSFIRTIQVRLRDRKDSPQLLMDAKHIF
PVTFPFNPSSLALETIQIPASLGLGFISRV
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccgagctctacacgaagtatgccagggtttggatccctgatccagaggag
gtgtggaagtcagcagaactcctcaaagattataaacctggagataaattccttcagctt
agacttgaagatggcaaggacctggagtacagcctcgatccgaagacgaaggagctgccg
cccctgcggaaccctgacatcctggttggtgagaatgacctgacagcactcagctacctg
cacgaacctgctgtcctgcacaacctcaaagttcgcttcatagactccaaactcatctac
acctactgtggtattgttttagtggccataaatccttatgaacagctgcctatctatgga
gaagatatcatcaatgcctacagtggccaaaatatgggggatatggatccacatatcttt
gcagtggctgaagaagcatacaaacagatggccagagatgagcgaaatcagtcaatcatt
gtcagtggggagtctggagctggaaagactgtctctgctaagtatgccatgaggtacttc
gccacggtcagtggctctgccagtgaagccaatgtcgaggagaaggtcttggcctccaac
cccatcatggagtctattggaaatgccaaaactaccaggaatgacaacagcagtcgcttt
ggtaaatacattgaaattggttttgataagaggtatcgaatcattggtgctaacatgaga
acttacctcttggaaaaatcaagggtggtgtttcaggcagaagaggagagaaattaccac
atcttttaccagctttgtgcctctgcagcattgcccgagtttaaaactctacgattaggg
aatgcaaattactttcactatacaaagcaaggtggaagccctgtgattgatggtgttgat
gatgctaaagaaatggtgaacaccaggcaggcctgcactttgctagggattagtgattcc
taccagatgggaatttttcgaatccttgctggcatccttcacttgggcaacgtggagttt
gcatctcgggattctgacagctgcacagttcctcccaagcacgagcccctcaccatcttc
tgtgaccttatgggtgtggagtacgaggagatgtctcactggctttgccataggaagctc
gccactgccactgaaacttacatcaagccaatttccaaactgcacgccatcaatgccaga
gatgcacttgccaaacatatctatgctaacctctttaactggattgtagatcatgtgaac
aaagcccttcatgccactgtaaaacagcattctttcatcggagtgttggacatctatgga
tttgaaacattcgaaatcaacagctttgaacagttctgtatcaactatgccaatgaaaaa
ctgcagcagcagttcaatatgcatgtctttaagctggaacaagaagaatatatgaaggaa
caaataccgtggaccttgattgatttctatgacaatcagccttgcatcaacctcatagag
gccaaaatgggagttctggatctgttggatgaggagtgcaagatgccaaaaggctcagat
gactcctgggctcaaaaactgtacaatactcatttgaataagtgtgctctctttgaaaaa
ccacggatgtcaaataaggcctttatcatcaagcactttgctgacaaggtggaataccaa
tgtgaaggctttttggaaaagaataaagacacagtttatgaagaacaaattagggtccta
aaatcaagtaagaagtttaagctgctgccagagttattccaggatgaggagaaggttctc
agtcccacatcagcaaccccttcagggcgtgtgcctctgtctcgaatgcctgtcaaacct
gccaaggccaggccagggcaagccagcaaggagcataagaaaactgtgggacatcagttt
cgaaattctcttcatctgctgatggaaaccctgaatgctacaactccacactacgtacgc
tgtattaagccaaatgacttcaagtttccattcacgtttgatgagaagcgggcagtgcag
cagctgagggcttgcggtgtcctggagaccatccggatcagtgctgctggcttcccctcc
aggtggacataccaagagttcttcagccgttaccgggttctgatgaagcagagagatgtc
cttggtgaccgtaagcagacctgtaaaaatgtcctggagaagctgattcaggacaaggat
aagtaccagtttggtaagacaaaaatatttttccgggctggtcaagtagcctacctggaa
aaaataagggcagataagttgagagctgcctgtatccgcatccaaaagacgatccggggc
tggctgatgaggaagaagtacatgcgtatgaggaaggctgccatcaccatccagagacat
gtcagaggctaccaggcacgatgctatgccaagttcctgcgcagaacacgagctgccatc
accattcagaagttccagcgcatgtacgtggtccgcaagaggtaccagtgcatgcgagat
gctactattgctcttcaggctctcctgagaggttacatggtcagaaacaagtaccaaatg
atgctgcgggagcacaagtctgtggttatccagaagcacgtgcggggctggctggcgcgg
cggcgctaccgccgcacgctgcgggccgtggtgtacctgcagtgctgctaccgccgcatg
atggccaagagggagctgaagaagctgaagatcgaggcccgctccgtggagcgctacaag
aagctccacatcggcttggagaacaagatcatgcagctgcagcggaaaatcgatgagcag
aacaaagagtacaaatccctgctggagaagatgaacaacctggagatcacctacagtaca
gagacggagaagctgcgaagcgacgtggagaggcttcggatgagtgaggaggaggccaag
aacgccaccaaccgtgtcctcagcctgcaggaggagattgccaagctccgcaaggagctg
caccagacccagtcggagaagaagagcattgaggaacgggcagacaaatacaaacatgaa
actgagcagctggtatcagagctgaaagagcagaactcattactgaaaacggaaaaggag
gagctgaaccgccgtatccatgaccaggcaaaggaaataacagagtcgatggaaaagaag
ctggtggaggagacgaagcagctggagctggacctgaacgatgaacggttacggtaccag
aacctgctgaacgagttcagccgcctggaggagcgctacgacgatctcaaggatgaaatg
aacctgatggtgagcatccccaagcctgggcacaagagaacggactcaactcacagtagt
aatgaatctgaatatactttcagctctgagatcacagaagcagaagacttaccactaagg
atggagcaggagcctagtgagaaaaaagcagcgctggacatgtctctgttcctcaagctg
cagaaacgggtttcagaactggagcaagagaagcagtccctgcaggatgaactggacaga
aaggaagaacaggctctccgtgctaaagctaaggaggaagaaaggcctcccataagaggt
gcagagttggagtatgagtcactcaagcgtcaagaacttgaatctgagaataagaaactg
aagaacgagttgaatgagctgcagaaggccctcacagagacacgagctccagaggtgact
gctcctggtgccccagcatacagagtgctcctggagcagctgacctcggtcagtgaggag
cttgaagtacgcaaggaagaagttctcatcctgaggtctcagctcgttagccagaaagag
gcaattcagcccaaggaggataagcatacaatgacagatgctacaatcctcttggaggat
gtacagaagatgaaagacagaggagaaatagcacaggcatatattggactgaaggaaaca
aacaggctgctggagtctcagctgcagtcgcagaagaagagccacgagaacgagctggag
tcgctgcgaggggagatccagagcctgaaggaggaaaacaaccggcagcagcagctgctg
gcccagaacctgcagctgcctcccgaggcgcgcatcgaggccagcctgcagcacgagatc
acccggctgactaatgagaacctggatttaatggagcagctggaaaaacaggacaaaact
gttcgcaagttaaagaagcagctgaaagtatttgctaagaagattggtgaacttgaagtg
ggccagatggagaacatatcacctggacaaatcattgatgaacctattcgtccagttaac
attccacggaaagaaaaggatttccaagggatgttggaatataagaaggaggatgaacaa
aaacttgtcaagaatcttattttagagctgaaaccacgtggggtagctgtcaacctgatt
ccaggactaccagcatatattttgttcatgtgtgtgcgccatgcagattaccttaatgat
gaccagaaagtgcggtcgttgttgacttccactatcaatggcatcaaaaaagtgttaaag
aaaagaggagatgactttgaaacagtgtccttctggctgtccaacacctgccgatttttg
cactgtttgaagcagtacagtggagaggagggatttatgaagcataatacacctcgtcaa
aatgaacactgcctcactaattttgatttagctgaatacagacaagtactgagtgatttg
gctattcagatctaccagcaacttgtccgagtgttggaaaatattctgcaaccaatgatc
gtttcagggatgctggagcacgagaccatccaaggtgtgtcaggggtgaagccaacaggg
ctgcggaagagaacgtccagcatcgccgatgagggcacctacaccttggactccatcatc
cggcagctgaactccttccactcggtgatgtgccagcatggcatggacccagagctgatc
aagcaggtggtcaagcagatgttctacatcatcggggccgtaacgctcaataacctcctc
ctgcgcaaggacatgtgctcctggagcaaaggaatgcagataaggtacaatgtgagtcaa
ctggaagaatggctacgtgataaaaatttgatgaatagtggggctaaggaaaccctggaa
cccctcatccaggctgcacagttgttgcaagtaaaaaagaaaacggatgaagatgcagaa
gccatatgttcaatgtgcaatgcactgactactgcccagattgtaaaagttctgaatttg
tatactccagttaatgagtttgaagagagagtcttggtgtcctttatacgtacaatacag
gtgcgtctgcgagacaggaaggactctcctcagctgctcatggatgccaaacacatcttc
cctgttactttcccatttaatccatcctctctggctttagaaaccattcagatcccagcc
agcttgggcctgggcttcatatcacgtgtctga
DBGET
integrated database retrieval system
