Lonchura striata domestica (Bengalese finch): 110474221
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Entry
110474221 CDS
T05897
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110474221 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110474221 (MYO5C)
04131 Membrane trafficking [BR:
lsr04131
]
110474221 (MYO5C)
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110474221 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsr04812
]
110474221 (MYO5C)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110474221 (MYO5C)
mRNA cycle factors
P-body specific factors
110474221 (MYO5C)
Membrane trafficking [BR:
lsr04131
]
Others
Actin-binding proteins
Myosins
110474221 (MYO5C)
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
110474221 (MYO5C)
Cytoskeleton proteins [BR:
lsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
110474221 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
Rnk_N
Motif
Other DBs
NCBI-GeneID:
110474221
NCBI-ProteinID:
XP_021393113
LinkDB
All DBs
Position
10:8783804..8815629
Genome browser
AA seq
1736 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDRFLHVQLEDGTELSHPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEYEHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMVETQKTFALLGLKGDFQMDVFKMLAAILHLGNVEVAAVGDERSSISMEDKHLRIFCE
LLDLNCDKMARWLCHRKIVTTSETVVKPMTRAQAANARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGKDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCANFFQDSPVSVSPF
SSTINIKSARPVLKSPNKQLRTTVGSKFRNSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDHNQYQFGRTKIFFRAGQVAYLEKLRSDKLRQACILIQKRVRGWLQRRRFLAVR
GAALTVQQYFRGQRTVRQAITARNLKETWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAY
TRGFLARKKYRKMREEQKAVVLQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKIEE
QSRENHGLLERLTNLASAHMSDVDTIQKLESELEKLTAQKRTYEEKGKKYKEDSEQKIFK
LENQNKELQEQKETLEIKLQEKTEEMKEKMDDLTQQLFNDVQKEENQRMILEKNFQNQKQ
DYEKEIALLKGEIKILKEEKTQLQQQIQQEIIIQDGLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAHSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVAELENQKLDLENRLQEQTIKLKEMSNRLHYELERDKTQRRTT
EAQNEVDIKEKESLKDTIQGIEGLSNGLVQDEVQGELQSKIKQVTTRLAVENMDLEEKLD
MKDRIIKKLEDQIKTLTKTIEKSEAHVPTVPKEYVGMMEYKKEDEERIIQNLILDLKPRG
VVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKGHSEDFEMLSFWLS
NTYYFLNCLKQYSGEEEFMKYNTPRQNKNCLKHFDLSEYRQILSDLAIQIYHQFIIVMEN
NIQHMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQNG
LDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQSSN
AKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKRVTPS
FVRKVQAMLNNREEVPQLMLDTKYLFQVTFPFTPSPHALELIQVPSSFKLGFLTRV
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagaccgttttctccatgtg
caattagaggatggaactgagctgagtcaccctgttgatccagctgctttgcctccacta
cgaaatcctgacatacttgttggtgaaaatgatctcactgcactcagttatctgcatgaa
ccagctgttctacacaatcttaaaattcgttttgtggagtctaaacttatctacacatat
agtgggataattctggttgcaataaacccctataagcagctgcccatatatggagatgcc
attatccatgcatatagtgggcaaaacatgggggacatggatccacacatatttgctgtg
gcagaagaggcatacaagcaaatggcaagaaataacaaaaatcagtctattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaaggtacactatgagatactttgccact
gtgagtaagtcaagcagcaatgcacacgtggaggacaaagttctggcatccaatccaata
accgaggctgtgggcaatgcaaaaaccacacggaatgataacagcagtcgatttggaaaa
tacactgaaatcagttttgatcagagttaccaaatcattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtgtttcagtcagaaaatgaaaggaactaccatatattt
tatcagttgtgtgcatctgctatgcagcctgaatatgaacatcttaaattgggaagtgca
gaagaatttaactacacacgaatgggtggcagcactgtaatagagggggttgatgacaga
gcaaatatggtggagactcagaagacatttgccttactgggtctgaagggggattttcag
atggatgtttttaaaatgctggcagcaatcctgcacttgggcaatgtggaagtagcagct
gttggagatgaaagatcatccatcagtatggaagataaacatctcaggatattctgtgag
cttctggatttaaactgtgacaaaatggcccggtggctgtgccacagaaagattgtcacc
acctcagagaccgtggtaaagccaatgacgagggcccaggctgccaacgccagggacgct
ctggcaaagaagatctactcccatttatttgacttcattgtggaaagaattaaccaagct
ctgcagttccctggcaagcaacacactttcattggtgttttggatatttatggatttgaa
acgtttgatgtgaacagttttgaacaattttgtatcaattatgctaatgaaaaactacag
cagcaatttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagacatc
ccatggactttaatagacttttatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagaacttctggatgaggaatgcttgttgcctcatggaaaagatgaaaac
tggcttcagaagctgtataataattttgtcaataaaaacgcactctttgaaaagccaagg
atgtcaaacacttctttcatcattcaacactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagagatacagtacatgaagtattgattgaaatcttgaaagag
agcaagtttcatctgtgtgcaaatttttttcaagacagtccagtgtccgtttcacctttc
agttcaactataaacatcaaatctgccagacctgttctgaaatcacccaacaaacagctc
cggacaactgtgggcagtaagttccggaattctttgtctttacttatggtgacactgaat
gcaaccactcctcattatgtgagatgcataaagccaaatgatgagaaattgccttttgag
tttgattccaagagagttgctcagcagctgcgagcatgtggtgttttggaaactattcgg
attagtgcacagagctacccatccaggtggacttacattgagtttttcagccgttacagc
attctcatgacacagcaggaactctccataaatgacaagaaacagatttgcaagattgtt
ttgcagaggttgatccaggatcataaccaatatcagtttgggagaaccaaaatttttttc
cgagcagggcaggttgcttacttggagaagctgcgctcggacaagctgaggcaggcgtgc
atcctgatccagaagcgcgtccggggctggctgcagcggcggcggttcctggccgtgcgc
ggcgcggcgctgacggtgcagcagtacttccgcgggcagcgcaccgtcaggcaagctata
actgcaagaaatctgaaggaaacatgggcagccataattattcagaaatactgtcggggt
tacctggtccgtagactttgccagctcatccatgtggctgctgtaacaatacaagcttac
acaagaggatttctagcaagaaaaaagtatcggaagatgcgtgaagagcagaaggctgtg
gtcctccagaaatacgcccgagcgtggctcgccaggcgccgcttccagaacattcggcgc
tttgtgttgaatatccagctctcatacagagttcagcagctgcagaaaaagatagaagag
cagagtagagaaaatcatggtttgctggaacgattgaccaatctggcttcagctcatatg
agtgatgtggatacaattcagaaacttgaatcagaattggaaaaattaactgctcaaaag
agaacatacgaagagaaagggaaaaaatataaagaggacagtgagcagaaaatctttaaa
cttgagaatcagaataaagaattacaagaacagaaggagaccttagaaataaaactccaa
gaaaaaaccgaggaaatgaaagagaaaatggatgacctcacacagcaactcttcaatgat
gtacaaaaagaagaaaaccagcgaatgatacttgagaaaaatttccaaaaccagaaacag
gactatgaaaaggagattgcattgctcaagggagaaattaagattctgaaagaagaaaaa
actcagttacagcaacaaattcagcaagaaattatcattcaggatggcttgaaaatggaa
gtaggacagcttacaaaacaagcacagaaaatacctgagctgcaaaaggaaatcgaactt
cttcagacacagaaattggatgttgaaaagcaggcccactcacagaagagagaattgagg
gaaaagatgtcagaagttacaaaacagcttcttgaaagttatgattttgaagatgtaaga
agcagactctctacagaggatctggaacacttaaatgaggatggagagctgtggtttgct
tatgaaggcttgaaaaaagccacaagagtattggaaagccatttccagtctcagaaagaa
atatatgagaaagagattgaaggtttgaactttaaagttgaacatcttagtcaagatatt
aatcatctacagaaattattccgagaggaaaatgacataaatgatggcattcggcttgaa
gttagcaggctaacttcagaaaatctggtaatcccagatcttaagcagcaagttgctgaa
cttgaaaatcaaaaattagatcttgaaaaccgtcttcaagagcagaccataaagttgaaa
gagatgtcaaatcgactgcattatgagctagaacgggataagacacaaagacgaactact
gaggcccagaatgaagtagacattaaagaaaaagagagtctgaaggacacaatccaagga
attgaggggttgagcaatggtttggtgcaagatgaagtccagggtgaactacaaagcaag
ataaagcaagtgacaactcgacttgctgtggaaaacatggatcttgaagaaaagctagac
atgaaagacagaataataaaaaaattagaagatcagatcaaaactctgaccaagactatt
gaaaaatctgaagcccacgtgcccactgtgcccaaagagtatgttggaatgatggagtac
aaaaaagaggatgaagaaaggatcattcagaatctgatcctcgatttaaagccacgtgga
gttgtagttaatatgatacctggccttccagctcacatcctgttcatgtgtgtgaggtat
gcagattacctgaacgatgctgacatgctgaagtctttcatgaatgtaaccattgatggc
atcaaacaggttgttaaggggcattcagaagactttgagatgttgtccttttggctttcc
aacacttattattttcttaactgcttgaagcagtacagcggggaagaggaattcatgaag
tataacactccacgtcagaataagaactgtttgaagcattttgatctctcagaatacaga
caaattctcagtgatttggccattcaaatatatcaccaattcattattgtaatggagaac
aacattcagcatatgattgtgccaggcatgctggaatatgaaagtcttcaaggaatttct
ggcttgaaacctacggggttccgtaaacgttcctctagtatagatgacacagatacctac
actatgacctctatcttgcagcagctcagctatttttatagcactatgtgtcagaatggc
ttggactctgagctcctaaagcaggcagtgaagcagcttttcttcctgattggagctgtc
accctcaatagcctcttcctccgcaaggacatgtgctcctgtagaaaaggaatgcagata
agatgtaatatcagctacttggaagaatggcttaaggacaagaatcttcaaagcagcaat
gccaaagaaactttggagcccctgtctcaagcagcctggctccttcaggttaaaaagatc
acagatgatgatgccaaggaaatatgtgaacactgcacatctctttctactgtgcagata
gttaagatcctgaactcatacactccaatagatgactttgagaaaagagtgactccatcg
tttgttcggaaggtccaggccatgctaaacaaccgtgaggaggttccacagctgatgctt
gataccaagtacctctttcaagtgacgtttcctttcaccccctctccgcatgctttggag
ctgatacaagtccccagcagcttcaaacttggctttctcacaagggtttaa
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integrated database retrieval system
