Lonchura striata (white-rumped munia): 110474226
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Entry
110474226 CDS
T05897
Symbol
PECAM1
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04148
Efferocytosis
lsr04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110474226 (PECAM1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110474226 (PECAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lsr04090
]
110474226 (PECAM1)
00536 Glycosaminoglycan binding proteins [BR:
lsr00536
]
110474226 (PECAM1)
04091 Lectins [BR:
lsr04091
]
110474226 (PECAM1)
CD molecules [BR:
lsr04090
]
Proteins
110474226 (PECAM1)
Glycosaminoglycan binding proteins [BR:
lsr00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
110474226 (PECAM1)
Lectins [BR:
lsr04091
]
I-type lectins (Siglecs)
110474226 (PECAM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
V-set
VEGFR1-3_N_Ig-like
Ig_C17orf99
Zwei_Ig_N
ZK512_Ig
Phage_TTP_1
Ig_Tie2_1
Motif
Other DBs
NCBI-GeneID:
110474226
NCBI-ProteinID:
XP_021393125
LinkDB
All DBs
Position
18:complement(3244545..3276126)
Genome browser
AA seq
731 aa
AA seq
DB search
MYLAFLVIFLQCSELYAQEKVFTFNRVEIQVQPSVRVKNGAPMSIICHADIIKNTDFQLK
HNFTFFKDGKLVFMTISDKKVAQYEIPVAKSSDTGDYECTVKVDGKLGFSNTTYVWVAGM
TKPILTADKKEVLEGEIVKLRCELPEEVPPLVFFFRKLKTNSAPKEKHILEQNQNFSEME
YYVEAEDNILQFDCFGKRQVRSGWDSSQHSNKTLVTVKESFIKPTLITRPSNNITEGDPI
EFECSTVVAQMRDIEIIFQKNRTILNSVRDKKFLKYSTVATQEDSGEYLCKVEQGAVSKT
TKLNVFVSELFPKPTLFASVTELDENKDLSLNCSINGLRRANFSILRKSSSGDILLKKSR
FLAIKVNVNDTGSYICKAEVKGIVKESKPVRISVYAPVSKPTLSVVSGSPEVVLGKPLQL
ICHSAMGTPPITFTFYKGNEMRKNVTNDTYATFLDEDIGLNDNGVYKCDARNNHSSGVKT
SNILNVTVIVPIRGASLGSVPYGEVEVGSDTAFLCSVKEGSWPIDFKFFKKTDHEVLLHE
VREYSDRTIWHKRTMKRKDTGTYYCMASNRASVDVRSRPITISVILAAWQKGVIAAFVLT
AMAGAGAVALWWFLHKKKKAKGPSMEMSGSALAPNLTSEKLTRPPSDGNYYSGSGYIEDN
ENHMKSTDESKGPDLESAEVDYTEVEVSTLDPYRAPEQKGTETVYSEIRKTNNDSMENRH
SQRIYGHPDAT
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttgcttttctggtgattttcttgcagtgttcagaactttatgctcaggagaaa
gtttttactttcaacagagttgaaatccaggttcagccgtctgtcagagtgaagaatgga
gctccaatgtcaatcatctgccacgctgatattatcaaaaatactgatttccagctgaag
cacaattttacattttttaaggatgggaagcttgtgtttatgaccatatcagacaagaaa
gttgcacaatatgaaatacctgtggccaaatcttcagatacaggagactatgaatgtact
gtgaaggtagatggcaagctgggtttcagtaacaccacctatgtttgggtagcaggaatg
accaagccaatcctgactgctgacaaaaaagaagtcttagagggtgaaattgtgaaatta
cgttgcgagctgccagaagaagtacctcctttagtgttctttttccggaagttaaagaca
aattcagcgcctaaagaaaaacacatacttgaacaaaaccaaaatttttctgaaatggaa
tattatgttgaagcagaagataatattttacaatttgattgctttggcaagagacaagta
agatctggatgggatagctcccaacacagcaacaaaacacttgttacagtcaaggaatca
tttataaagcccactctgatcaccaggccctccaataacattacagaaggagacccaata
gaatttgaatgctcaactgtggtagctcaaatgcgtgacattgaaatcatcttccagaaa
aatagaacaatactgaacagtgtacgagataagaaatttttgaaatactctacagtagct
actcaagaggacagtggtgaatacctgtgtaaggtggagcaaggagcagtgtctaaaacc
accaaactgaatgtctttgtgtcagaactattccccaagccaacactgtttgcttctgtg
actgagttggatgaaaataaagatttaagtttgaactgcagcattaatggtttacggaga
gccaacttctctatactacggaaaagttccagtggagacatcctgttgaaaaagtctaga
ttcttagcaattaaagttaatgtgaatgatactggatcttacatctgcaaagctgaagta
aaaggaatagtcaaggagagcaaacctgtaaggataagtgtttatgctccagtctccaag
ccaactctttctgttgtcagtggttcaccagaggtggtattagggaagcctctacaatta
atctgtcattcagcaatgggaacgcccccaataacattcaccttctacaaagggaatgaa
atgaggaaaaatgtaactaatgacacatatgctacattcttggatgaagatattggacta
aatgataatggagtatacaaatgtgatgctagaaacaatcactccagtggtgtgaaaact
agcaatattctaaatgtcacagtgatagtaccaatcaggggtgccagtttgggcagtgtt
ccatatggagaagtagaagttggcagtgatactgctttcctctgctctgtgaaagaagga
tcttggccaattgacttcaagttttttaaaaaaactgatcatgaagttcttctacatgaa
gtaagggaatattcagacagaaccatatggcacaagaggacaatgaagaggaaggacaca
gggacctattattgcatggcttcgaaccgagccagcgtggacgtgaggagccgtccaata
accatcagtgttatcttagcagcctggcagaaaggagtcattgctgcatttgtcctgaca
gccatggcaggagcaggagcagttgctttatggtggtttttgcataagaagaaaaaggct
aaaggaccatccatggagatgtctggttctgccttggctccaaacttgacgagtgaaaaa
ctaacaagaccacccagtgatggaaactactattcaggatcaggttacattgaagataat
gaaaaccacatgaaatcaacagatgagagtaaaggacctgaccttgagagtgctgaggtg
gattacactgaagttgaagtctccacgcttgatccttacagagctcctgaacagaagggg
actgaaacagtttatagtgaaatcagaaaaactaataatgattctatggaaaacaggcat
tctcagagaatatatgggcatcctgatgctacctag
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