Lonchura striata (white-rumped munia): 110474278
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Entry
110474278 CDS
T05897
Symbol
EFL1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110474278 (EFL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsr03009
]
110474278 (EFL1)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
Pre-60S particles
GTPases
110474278 (EFL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
110474278
NCBI-ProteinID:
XP_021393256
LinkDB
All DBs
Position
10:11645635..11711924
Genome browser
AA seq
1138 aa
AA seq
DB search
MVLTSVGKMVGLQKKASGIRNICILAHVDHGKTTLADCLISSNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHFVKGNQEYLINLIDSPGHVDFSSEVSTAVRLCDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKLTPQEAYLHLKNILEQINAVTGTL
FTSKVLEERAEKETESETLSDASPGDQIYDWSTGLEDTDDSHLYFSPEHGNVVFASAIDG
WGFGIEHFAKLYSQKIGIKPAVLLKTLWGDYYLNTKAKKIMKGDQSKGKKPLFVQLVLDN
IWSLYEAVMKRDKEKIEKIVTSLGLRIGARESRHADPKVHLNAICSQWLPISDAVLSMVC
NKIPSPLDITAERVEKLMCVGARTFDSLPPETQELKNAFMKCSSEGTAPVIVFVSKMFPV
DAKALPQNKPRPLTQEEIAHRRELAKQRHAEKLAASQGKEMSEKAPSENSSEVTESPDDT
KGEEQQLPGQGDSVTSKAVKQEADNKEYFIAFARVFSGVVKRGQKIFVLGPKYDPAESLH
KLSSQCSATDDLPAVPHMMCCTLENLYLLMGRELEDLEEVPAGNVLGIGGLQDFVLKSAT
LSTSPACPPFTPLNFEATPIVRVAVEPKHPSDMPQLVRGMKLLNQADPCVQVLIQETGEH
VLVTAGEVHLQRCLDDLKERFAKVQISVSAPIIPFRETITRPPKVDMVNEEIGKQQKVAV
IHQTKEDQNKIPEGIQVDSDGLVTINTPNKQATLSVRAMPLPEEVTRLLEENSDLIRTME
QLNTSLNEDKKTHEINQKTLDRIKEFKQKLEKSLQGRKWRNAVDQIWSFGPRKCGPNILL
HNFEGYKRSVWQCLGNSVKEVGKYRDFDNSIVSGFQLATLSGPMCEEPLMGVCFSVEKWE
INKAGDTLSNNRQDSGELDTTEHQQNEDNTLASSCTDEGSRANERQDRNQSGTDSPEKMS
RHKGELPLADCYGPFSGQLIATMKEACRYALQAKPQRLMAAMYTCEIMATAEVLGRVYAV
LSKREGRVLQEEMKEGTDVFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIISS
DPFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSRNK
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcaccagcgtggggaagatggttggcctgcagaagaaggcgtccggcatcagg
aatatctgtatattggcccacgtggatcacggcaaaaccactctagctgattgccttata
tctagcaatgggataatctccagccgcttggcaggcaagctgaggtaccttgacagtagg
gaagatgagcagatccgaggaataacaatgaaatctagtgcaatttcactgcactttgtg
aaaggtaatcaggagtatctgattaatttaatagactccccagggcacgtggatttttct
tcagaagtatctactgctgtccgactctgtgatggttgcattatagtggtggatgctgtt
gaaggagtctgtccacagactcaggcagtcctgcggcaggcgtggctggaaaatatccgt
cctgtcctggtgattaacaaaattgaccgcttgattgtggagctgaagctcactcctcag
gaagcatatttgcaccttaagaatatcttagaacagatcaatgcagtcactggaacactt
tttacctccaaagtgttagaagaaagagctgaaaaagaaacagaaagtgaaaccctttca
gatgcatcaccaggagatcaaatttatgactggagtactggattggaagacactgatgat
tcacatctttatttttcaccggaacatggcaatgtggtgtttgctagtgcaattgatggc
tggggttttggaattgaacattttgccaaactgtatagccaaaaaattggaatcaagcct
gcagtacttctgaagactttatggggagattattatttaaatacaaaagcaaagaagata
atgaaaggtgatcagtcaaaaggaaagaaacctttgtttgtgcagctggtgctggacaac
atttggagtctgtacgaggctgttatgaaaagagacaaagaaaaaatagaaaagatagtt
acctctttgggattgagaattggtgcccgggagtcacggcatgcagacccaaaagttcat
ctaaatgccatttgtagccagtggctaccaatatctgatgcagtcctctccatggtgtgt
aataaaattcccagtcctctggacatcacagcagagagagtggaaaagttgatgtgtgtt
ggagcgagaacatttgattctttgccaccagaaactcaggaattgaaaaatgcttttatg
aaatgcagtagtgaaggaacagccccagttattgtctttgtttccaaaatgtttcctgtt
gatgcaaaggcattgccacagaataaaccaaggccattaactcaggaagaaattgctcat
cggcgtgaacttgccaaacaaaggcatgcagaaaaattggcagcaagtcaagggaaggag
atgtcagaaaaagccccaagtgaaaattcatctgaagtgactgagagccctgatgataca
aaaggtgaagagcaacagctccctggtcaaggagacagtgtgacctcaaaggcagtgaaa
caggaagcagacaacaaggaatatttcattgcttttgccagagtgttcagtggcgttgta
aaaagagggcaaaaaatctttgttttaggaccaaaatatgatcctgctgagtctttgcat
aagctgtcatcccaatgctctgccactgatgatctgccagcagtccctcacatgatgtgc
tgcactttggagaacctctacttacttatgggaagagagcttgaagatcttgaggaagtg
cctgcaggaaatgttctgggaataggaggcctgcaagattttgtgctgaagtctgcaaca
ctatcaacatcacctgcttgtccaccatttacacctctcaactttgaagctaccccgatt
gtgcgagtagcagttgaacccaaacatccaagtgatatgcctcagctcgtcagagggatg
aaacttttaaaccaagctgatccatgtgtgcaggttttgatccaggagacaggagaacat
gtgctggtgacagcaggagaagttcatcttcagcgctgcttggatgacctgaaagaaagg
ttcgcaaaggtgcagatcagtgtatctgctcctattatacccttccgagagaccataaca
agacctcccaaagttgatatggtgaatgaagaaataggcaaacagcagaaagttgctgtc
atacaccaaacaaaagaggaccaaaataaaattcctgaaggaattcaggttgattcagat
gggcttgttacaattaatactccaaataaacaagctactctcagtgtgagagcaatgcca
ctccctgaggaggtaactcgacttcttgaagaaaacagtgatttaattcgaactatggaa
caactcaacacatctctgaatgaagataaaaaaacacatgagataaatcagaagactctt
gacagaatcaaagaattcaagcaaaagttggagaaaagtcttcagggaagaaagtggaga
aatgctgttgatcagatctggtcatttggaccacggaagtgtgggcctaatattttgtta
cataattttgagggctataaaagatctgtgtggcagtgccttgggaactctgtgaaagaa
gtaggtaaatacagagactttgacaacagcatagtaagtggatttcagctggctacactt
tcaggccccatgtgtgaagagcctctcatgggtgtttgtttttcagtggaaaaatgggaa
ataaataaagctggagatactctgtcaaataataggcaggattcaggggaacttgatacc
acagaacatcagcaaaatgaagataatactctagcaagcagttgcactgatgaaggttcc
agagcaaatgaacgccaggacaggaaccaaagtggcacagactcacctgagaaaatgagc
agacacaaaggagaattaccacttgcagattgttatggccctttctctggacagctgatt
gccaccatgaaggaagcctgtcgttatgctttgcaggcaaagccacagagactcatggca
gcaatgtacacatgtgaaatcatggctactgcagaagttttaggtcgagtgtatgctgtg
ctgtccaaaagggaaggcagagtgctccaggaggagatgaaagaggggacggatgtgttt
attattaaggcagtcctgccagtagcagaaagctttggctttgctgatgaaatcaggaag
agaaccagtgggctggccagtccacagctggtgttcagccactgggagatcatttcaagt
gacccgttctgggtgccaacgacggaggaggaatatttgcactttggggagaaggcggac
tcggagaaccaggcccgcaagtacatgaacgcagtgagaaagagaaaggggctctatgtg
gaagaaaaaatcgtggagcacgctgagaagcaaagaactctgagcagaaataagtag
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