Lonchura striata (white-rumped munia): 110474320
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Entry
110474320 CDS
T05897
Name
(RefSeq) GDNF-inducible zinc finger protein 1
KO
K22402
GDNF-inducible zinc finger protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110474320
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
110474320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_15
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_11
zf-C2H2_16
zf-Di19
Zf-C2H2_ZNF451_C
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
110474320
NCBI-ProteinID:
XP_021393316
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All DBs
Position
3:complement(28534826..28542927)
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AA seq
824 aa
AA seq
DB search
MAAALWGGRRRRALPGYLRTDTNLVAAFKIQKMIPAVPVARGATRRGSIPGGWMEKKKIL
MKSKVAAPNLLRALYSLYQLGHLCDVTVLTQHLGIQEEILAHKAVLAASSNYFKGLFLHQ
EILDTQKCTVTLQDIYTEEFTSFLEFVYTAEVEIEAGKLQRMKEIAERLECKDLLDICEE
VKAEGRKGLDLSLHMKGQRGEKRGSQWPCIQQEENPRNSSQVMAIPMQRKLWDRQKHKEL
LPGYELIGGQAGGLEQEATAFPAPKSRPAKLPKCNKTHSPTRLCVDITSLENKDGHSLCR
EKEQKQESQVCPYCDKAISSKCSLAAHIRTHTGDGCYRCQHCPASFTHRAAYTSHLRKIH
ESGEERKLLPVYWMVVPPTHGLNPTCRDKDPNGETWDGTPETSECEEDARNSSIAEAERS
KEQEESQEAKRANEDGGGMSVKGEEQGDYDTGYSEVEGSRDNEVCSEEEEDEASTEKDSK
EPEPGFKLKKASESVANKKSIYVIHCDKCQEQFVSRKKYVDHCRDVHRSLPGNVYRCEVC
SKAFASYTSWKEHRAYVHNEERRFSCSLCQATFKRKRDVRTHSMRKHEGRAKRPLCSVCG
KILSSHTALVFHMRTHTGEKPYECGVCHSRFAQPSQLKIHTRSHTGEKPYICEDCGASFA
DRGKLTGHKRTHTGERLFRCDVCGKDFATNEYLKCHRRCHLGAKPYRCEVCGKAFGLRAS
LAQHSNVHAETRPYFCEQCGKAFTQQGALRRHQRIHTGEKPYKCRACERTFTDVSTLRRH
VAIHDRNAHWRNFLIDLTQKKDNNWSKIETLAEVHPGGDPMPEI
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgctctggggcggcaggcggcggcgagctcttcccggatatctgcgcacg
gatacaaatcttgtggctgcattcaaaatccagaagatgatcccggctgtgccagtggca
cgaggagcaacacggcgcggcagcattcccggaggatggatggagaagaagaaaatcctg
atgaagtccaaggttgctgctcccaacctcctgagggctctgtattccctctaccagctt
gggcacctttgtgacgtgacagtcctcacccaacacctgggaattcaggaggaaatcctg
gctcataaagccgtcctggcagcttccagcaactacttcaaggggctcttcctgcaccag
gagatactggacacccagaagtgcacggtgactctgcaggacatctacaccgaggagttc
acctccttcctggagtttgtgtacacagcagaagtggagatagaggcgggaaaactccag
aggatgaaggaaatagcagaaaggctggaatgcaaggatttgcttgatatctgtgaggaa
gtgaaagcagaaggcaggaagggcttggatttgagcctccacatgaaagggcagaggggt
gaaaagaggggatcacagtggccttgtatccagcaagaggaaaaccccaggaactcttcc
caggtcatggcaattcccatgcagagaaaactttgggataggcagaaacataaggagctt
ctgccgggctatgagctcattggtggccaagcaggaggcctggagcaggaggccacagct
tttccagccccaaaatccaggccagcaaagctgcccaaatgcaacaagacacattcccca
accagactgtgtgtggatatcaccagcctggaaaacaaggatggtcattctctctgcagg
gagaaggagcagaagcaggaatcccaggtgtgtccctactgtgacaaggccatcagctcc
aagtgcagcctggccgcgcacatccggacacacacgggggatgggtgctataggtgccag
cactgccccgccagcttcacccacagggctgcctacacctcccatctcaggaaaatccat
gagtctggggaagagaggaaactcctgcctgtttattggatggtggttccacccacacat
ggcctaaaccccacatgccgtgacaaagatcccaacggagagacttgggatgggacacca
gaaacctcagagtgtgaggaagatgccaggaattcatccattgctgaagcagaaaggagc
aaggagcaagaggaatcccaggaagctaaaagagcaaatgaagatggaggtggaatgagt
gtgaagggcgaggagcagggagactatgacacaggatactcggaagttgaaggaagcagg
gacaacgaggtatgttctgaggaggaggaggatgaagcctcaacagagaaggacagcaaa
gaacctgaaccagggtttaaactaaagaaggccagtgaaagtgtggccaacaagaaatcc
atctacgtgatccattgcgacaagtgccaggagcagtttgtttcccggaaaaaatatgtg
gatcactgccgggatgtgcaccggagcctgcctggcaacgtgtaccgctgcgaggtgtgc
agcaaagccttcgccagctataccagctggaaggagcaccgtgcctatgtgcacaatgag
gagaggaggttctcctgcagcctctgccaggccaccttcaagaggaagcgggatgtgagg
actcactccatgcgaaagcatgagggcagggccaagcggccgctgtgctccgtgtgcggc
aagatcctgagctcccacacggcgctggtgttccacatgcggacgcacactggcgagaag
ccctacgagtgtggcgtgtgtcactccaggtttgctcagccttcccagctcaagatccat
accagatcccacactggggagaagccctacatttgtgaggactgcggtgcttcctttgcc
gacagaggaaaactcactggccacaaaaggacacacacaggagagcggctcttcagatgt
gacgtgtgcgggaaggactttgccaccaacgagtacctgaagtgccacaggcgctgtcac
ctgggagccaaaccctacaggtgtgaagtttgtgggaaagccttcggtctcagagcctcc
ctggcccagcacagcaacgtccatgcagagacccgtccctatttctgcgagcagtgtggg
aaggccttcacacagcagggagctctgcggcggcaccagcgcatccacactggagagaag
ccctacaagtgccgggcctgcgagaggaccttcactgacgtgtccaccctgcgccgacac
gtagcgatccatgaccggaatgctcactggagaaacttcttgattgacctcacacaaaaa
aaagacaacaattggtccaaaatagagactttagcagaagtgcatccaggaggagatcca
atgccggaaatttga
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