Lonchura striata (white-rumped munia): 110474332
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Entry
110474332 CDS
T05897
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsr01002
]
110474332 (RHBDL3)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
110474332 (RHBDL3)
Peptidases and inhibitors [BR:
lsr01002
]
Serine peptidases
Family S54: Rhomboid family
110474332 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_11
EF-hand_8
EF-hand_9
AIF-1
EH
Motif
Other DBs
NCBI-GeneID:
110474332
NCBI-ProteinID:
XP_031362222
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Position
18:3047338..3108310
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AA seq
407 aa
AA seq
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MGDRLPEPHASSSPAVAASSEAEEIEVLDSEDVLPMAAEDHWKVLFDQFDPDSTGYISTE
KFRSLLQRHGSELDPHKLEVLLALADSNSEGRICYQDFVNLMSNKRSNSFRQAILQGNRR
LCSKALLEETGLSLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITITIVEVAFF
LYNGVVLDRFVLQVSHPLYLKNALLYHPQLRAQAWRYLTYIFMHAGIEHLGLNVVLQLLV
GVPLEMVHGAARISFVYVAGVVAGSLAVSVADMRAPVVGSSGGVYALVSAHLANIVMNWS
GMKCQFKLLRMAVALICMSFEFGRAVWLRFHPSAYPPCPHPSFMAHLGGVMVGITLGVII
LRNYEQRLQDQTLWWIFLSIYIIFVLFAIFWNIFAYSLLDLKLPPPP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaggctgccggagcctcacgccagctcttcccctgctgtggctgccagctcg
gaggcggaagaaatcgaggtgctggactccgaagatgtcctacctatggccgcagaggat
cactggaaagtcctatttgatcagtttgatcctgacagcactggctacatcagcactgag
aagttccgctcccttctccagaggcatggctcggagctggacccccacaagctggaggtc
ctgctagccctggcagacagcaactctgaggggaggatctgctaccaggacttcgtcaac
ctgatgagcaacaaaaggtcgaacagtttccgccaggccatcctgcaggggaacaggagg
ctgtgcagcaaggccctgctggaagagacggggctgagcctctcgcagaggctgatccgg
cacgtggcgtacgagaccctgccgcgggagatcgaccgcaagtggtactatgacagctac
acctgctgccccccgccctggttcatgatcaccatcaccattgtggaggttgcctttttt
ctttacaatggagtggtcttagacagatttgtgctgcaagtcagccaccccttgtacctg
aagaatgcattattgtaccatccccagcttcgggcccaggcttggaggtacctaacctac
atattcatgcatgcagggatagaacatcttgggctcaatgttgtccttcagctcttggtt
ggggttcctctggaaatggtgcacggagctgcaaggatcagttttgtgtacgttgcagga
gttgtggcagggtccctggcagtgtcagtggctgacatgagggcgccggtggtgggctcc
tctggaggtgtgtatgctcttgtctctgctcacctggccaatattgtgatgaactggtca
ggaatgaagtgccaattcaaactgctgcgcatggctgttgccttgatctgtatgagcttt
gaatttggaagagccgtgtggctgcgattccacccctccgcttaccccccatgcccccac
cccagcttcatggctcacctgggaggggtgatggttggaatcacccttggtgttatcatc
ctgaggaactatgagcagagactccaagatcagactttatggtggatcttcctttctatt
tacatcatttttgtcttgtttgccatcttctggaatatttttgcctacagtctgttggat
ctaaagctacctccccctccttga
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