Lonchura striata (white-rumped munia): 110474343 Help Entry 110474343         CDS       T05897                                  Symbol CCDC88A Name (RefSeq) girdin isoform X2   KO K25392   girdin Organism lsr  Lonchura striata (white-rumped munia) Brite KEGG Orthology (KO) [BR:lsr00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:lsr03037]     110474343 (CCDC88A) Cilium and associated proteins [BR:lsr03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    110474343 (CCDC88A) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HOOK_N HOOK APG6_N KASH_CCD Motif Other DBs NCBI-GeneID:  110474343 NCBI-ProteinID:  XP_021393368 LinkDB All DBs Position 3:27812249..27876045 Genome browser AA seq 1932 aa AA seqDB search MENEIFTPILEQFMSSPLVTWVKTFGPLAGGNGTNLEEYVALVDGVYLNEVMLQINPKSA NQRINKKVNNDASLRIQNLSILVKQIKTYYQETLQQLIMMSLPNVLIIGKNPFSEPGTEE VKKLLLLLLGCAVQCQKKEEFIEIIQSLDFDTRAAVAAHIQEVTHNQENVFDLQWMDVIV LTQEYVEPLLKNMALHLKRLIDERDEHSETIIELSEERDCLRFLPHASAAQSPCGSPGMK RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEAELKRLQQENMNLLSD ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQ SMDESLHLGWELEQINRTTELSEVPQKSLGHEVNELTSSRLLKLEMENQSLLKTVEELQS AVGSVEGSSSRILKMEKENQRLSKKLEELENEISQEKQSLQNSQNQSKDLMKEKAQLEKT LEALRENSERQIKLLEQENEHLNQTVASLRQRSEISAEARMKEIEKENKILHESIKETSS KLNKIEFEKKQVRKELEHYKEKGERAEELENELHHTEKENELLQKKITNLKITCEKIEAL EQENSDLETENRKLKKTLDSLKNLTFQLESLEKENSQLDEENLELRRTIESLKCTSIKVA QLQLENKELESEKEQLKKSLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQQ LESELQDLETENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL RQQAEIKDSTLEENNVKISNLERENKSLFKEIVVYKESCLRVKELEKENKELVKRATIDK KTLVTLREDLVNEKLKTQQMNNDLEKLAHELEKIGLNKERLLHDEQSSDDSRYKLLESKL ESTLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEERMVQNSP PRSGEGNQSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNN NLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLEN ENEAVLKEREDLKGLYEALLKDHERLELLHERQAAEYESLIAKHGSLKSAHKNLEVEHKD LEDRYNQLLKQKVQLEELEEVLKTEQDKMLQQSEKHETVAAEYKKLRDENERLTHTYNQL LRENEVLQTDHKNLKTLLNSSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLK GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI MDQYKFYEPSPPRRRGNWITLKMRKLIKSKKDGNRERLKSATLTPTRSESSEGFLQLPHQ DSQDSSSVGSNSLEDGQTLGTKKSNMGALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQ SMVLAGGQWTGSSEHLEGPDDISTGKRRKELGSMAFSTTAINFATVNSSTGFRSKQLLNN KDTTSFEDVSPQGISDDSSTGSRVHGVQDFICADALAPPVRGIPALCRVPCQICLPFSKV SSWTAWKFLRFLISSRPASLDSGRTSTSNSNNNASLHEVKGAVNSQSRPQSHSSGEFSLH HEHEAWSSSSSSPIQYLKGHTRSSPVLQHRTPETLESRGKQTKTGSPGSEVVTLQQFLEE SNKSNSSEMKSASEENLLDEVMRSLSESAELAGREKLRKQPAAGCGIVRSLSVRNTVDFS DGRSRKPEQLVRPSLRKSEDLYFSSSPIKFTPGTQGKARSVKEKIQATVTQQQSRDSNPY ATLPRASSVISTAEGTTRRTSIHDFLSKDSRPPMSVDAAPAPADRSAPPTSNVEAIPESR NTKSRSREQQSS NT seq 5799 nt NT seq  +upstreamnt  +downstreamnt atggagaacgagatcttcacacccattctggagcagttcatgtcgagccctcttgtcacc tgggtgaagacatttggaccgctggctggaggaaatgggaccaacctggaggaatatgtg gcgctggtggatggagtgtatctgaacgaagtcatgctgcaaatcaatccaaagtctgct aatcagaggataaacaaaaaagtaaacaatgatgcatcattaaggattcaaaatttgtct attttggtgaaacaaataaaaacttactatcaggagactttgcagcagttgatcatgatg tctttgccaaatgtgctaataattggcaaaaatcctttttctgagccaggtactgaagaa gtaaaaaagctcctcctgcttttgcttggttgtgcagttcagtgtcagaaaaaagaagaa tttattgaaataatccaaagtctggattttgataccagagcagctgttgcagcccatatt caggaggtaactcataatcaggaaaatgtgtttgacctgcagtggatggatgtcattgtg ctgacacaagaatatgttgagcctctcctgaaaaatatggcattgcatttaaaaagactt atagatgaaagagatgagcactcagagaccatcatcgagctgtcggaggagcgggactgt ctccgtttcctgccgcacgcctcggccgcgcagtccccgtgcggctctcctggcatgaag cgcaccgagagccggcagcacctgagtgtggagcttgccgacgccaaggccaagatcagg aggctgaggcaggagcttgaggaaaagactgagcagctgcttgactgtaagcaagaacta gaacagatggaagctgaactgaagagacttcagcaagagaacatgaacctgctgtcggat gcccgctctgccagggtgtaccgggacgagctggacgcgctgcgggagaaggcgatccgc gtggacaagctggagagcgaagtcagccgctacaaagagaggctccatgacattgagttc tacaaagccagggtggaggagttaaaggaagacaatcaagtgttgctagaaaccaagaca atgttggaagatcaattagaggggacccgagcgcgttcagataaactgcatgagttagaa aaagagaatttacaactaaaagctaaattgcatgatatggagatggagcgtgatatggac agaaagaagattgaggagctcatggaggaaaatatgaccctagaaatggctcagaaacaa agtatggatgagtctttgcatcttggctgggagctggagcagataaacaggactactgaa ctttctgaagtgccacagaaatcactgggccatgaggtgaatgagctgacatctagcagg ttactgaagctggaaatggaaaaccaaagtttactgaagacagtggaagagctgcagagt gcagtgggctctgtggaaggcagcagttcaaggattctgaaaatggaaaaagaaaaccaa agacttagcaagaagcttgaagaactggagaatgaaattagccaagagaaacaaagtctt cagaacagtcaaaatcagagtaaagatttgatgaaagaaaaagcacagcttgaaaagaca cttgaagcacttcgcgagaactccgagcgacaaattaaactcttagaacaagaaaatgag cacttgaatcaaactgtggcttctctaaggcagcgctcagaaatcagtgctgaggcgaga atgaaagaaattgagaaggaaaataaaatcctccatgagtctatcaaagagaccagcagt aagttaaataagattgaatttgaaaaaaaacaagtcaggaaagaactggaacactacaaa gagaaaggggagagggcagaagaattagagaacgaactgcatcatacggagaaggaaaat gagttattacagaagaaaatcaccaacctaaaaatcacttgtgagaagatcgaggcctta gaacaagagaactctgacctggagacggagaacagaaagctgaaaaaaaccttggatagc ctgaaaaacctcacttttcaattagagtcgttagaaaaagagaattcccagctcgatgaa gaaaatttagagttacggaggacaattgaatccttgaagtgtacaagcattaaagtggca cagttacagttagaaaataaggagctggagagtgaaaaggagcagctcaaaaaaagcctt gaactgatgaaagcctcttttaagaagactgaacgcttggaagtgagttaccaaggcctg gacacggaaaaccaaaggctacagaaagccctggaaaacagcaataagaagattcagcaa ttagagagcgaattacaagatttagagactgaaaatcagaccctgcaaaagaatttggaa gagttaaaaatctctagtaaacgtctggagcagttggaaaaggagaataagttgttagaa caagagacctctcaactggaaaaggataagaaacagctggaaaaggaaaataaaaggctt cgacaacaagcagaaattaaagatagtaccttagaagaaaataatgtcaaaatcagtaat ctggaaagggaaaataaatctctttttaaagaaatagttgtatacaaagagtcgtgtctg cgcgtgaaagaactggaaaaggaaaacaaggaactggtgaaaagagctaccattgataag aaaaccctggtcactttgagagaggacttggtgaatgagaaattgaagactcaacagatg aacaatgatctagaaaaactggcccatgagcttgagaaaattggcttgaacaaggagcgt ctcctgcatgatgagcagagcagtgatgacagtaggtacaagcttttggagtccaaatta gaatccacactcaagaagtctctggaaataaaagaagaaaaaattgctgctttggaggct cgtttggaagaatcaacaaatctaaaccagcaactacgtcaggaactgaaaacggtgaag aagaactatgaagctctcaagcaaagacaagaagaggaaagaatggttcagaattctcct ccaagaagtggagaaggaaatcagtctgtcaataagtgggagaaagaaaatcaggagact actagagaattactgaaagttaaagatagattaatcgaggtggagaggaataatgcaacg ctgcaggcggagaagcaggcgctgaaaacgcagctcaagcagctcgagacacagaacaac aacctgcaggcccagatcctggccctgcagagacagactgtgtccctgcaagagcaaaac actactctgcaaactcagaatgccaaactgcaggttgagaattccacgctgaactcgcag agcacgtccctgatgaaccagaacgcgcagctgctgatccagcagtcatccctggagaac gagaacgaggccgtgctgaaagagcgcgaggacctgaaggggctctacgaggccctgctc aaggaccacgagcgcctggagctgctgcacgagcgccaggccgccgagtacgagtccctc attgccaagcacggcagcctcaagtctgctcacaagaacctggaggtggagcacaaggac ttggaggataggtacaatcagttgctgaaacagaaagtgcagctggaagaactggaggag gttctcaaaacagagcaggacaaaatgctgcagcagagtgagaagcatgaaactgtggca gcagaatataaaaaacttcgggatgaaaatgaaaggctcactcacacatacaatcagctc ctgagggagaatgaagtgctacaaactgaccacaagaatctgaaaacattattgaacagt tccaaactggaacaaacacggttggaagctgagttttctaaactcaaagaacagtaccag caactggatattacatcaacaaagctaaataatcagtgtgagctgctcagccaacttaaa ggaaacctggaggaggaaaacagacacctgctggatcaaatccagaccttaatgctgcag aacagaactttactggagcagaatatggaaagcaaggatctcttccatgtagagcaaagg cagtacattgacaaactaaatgaattgaggcggcagaaggagaaactggaggagaagata atggatcagtataagttttatgagccatctccgccaagaagaaggggcaactggatcacc ctgaagatgaggaagctgatcaagtccaagaaggacgggaaccgcgagcgcctcaagtcg gcaacgctgacgcccacacgctccgagtccagcgagggattcctgcagctgccccaccag gacagccaggacagctcctctgtaggctccaactccctggaggatgggcagaccctgggc accaaaaagagtaatatgggtgcactgaaaagactgccctttttgaggaacagaccgaag gaaaaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgacctggtgcag tccatggtcctggcaggaggacaatggacaggtagttctgagcatctggagggtcctgat gatatatccacgggtaaaaggaggaaggaattgggatctatggccttctctactacagct atcaactttgccactgtcaactcttccacaggcttcagatccaagcagttgctaaataat aaagataccacatcctttgaagatgtaagtccacaaggtattagtgatgattctagtaca ggatcaagagttcatggagtacaggactttatctgtgcagatgctcttgctcctcctgtc cgtggcattccagccctgtgcagggttccctgtcagatctgtttgcccttttccaaagtg tcctcttggaccgcctggaaattccttcgctttctgatctcttccagaccagccagcctt gatagtggcaggacatccactagcaatagcaataacaatgcttcactccatgaagtcaaa ggtgcagtgaacagccagagcaggccccagagccacagcagcggggagttcagcctgcac cacgagcacgaggcctggtccagcagcagcagcagccccatccagtacctgaaggggcac accaggtccagccctgtgctccagcacaggacgcccgagacgctggagagtcgtggcaaa cagaccaaaacaggctctcctggtagtgaagttgtcaccctgcagcagttcctggaagaa agcaacaagagtaactccagtgagatgaaatctgcgagtgaggagaaccttttagatgaa gtgatgagaagtttgtctgaatctgcggagctggcagggagggagaagctccgaaagcag ccggcagctggctgtgggatcgtgagatccctgagtgtcagaaacacagttgatttctca gatggacgatcccgtaaaccagaacagcttgtaaggcccagccttcggaagagtgaagat ctctacttcagtagctctccaatcaaattcacccctggcacccaggggaaggcccggtct gtgaaagaaaagatccaagcaactgtgacccagcaacaatccagggactccaacccctac gccaccttacctcgtgccagcagtgtgatttccacggcagaaggaaccacccgaaggaca agcatccatgattttttgtctaaggacagtaggccgcccatgtccgtggatgcagccccg gccccggctgacaggagtgctccacccacctccaatgtggaagctatcccagaaagcaga aatacaaaaagcaggtctagggagcaacaaagctcctaa

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