Lonchura striata (white-rumped munia): 110474344
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Entry
110474344 CDS
T05897
Symbol
RHOT1
Name
(RefSeq) mitochondrial Rho GTPase 1 isoform X3
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110474344 (RHOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110474344 (RHOT1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lsr04031
]
110474344 (RHOT1)
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
110474344 (RHOT1)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
110474344 (RHOT1)
GTP-binding proteins [BR:
lsr04031
]
Small (monomeric) G-proteins
Rho Family
Miro
110474344 (RHOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
EF-hand_7
EF-hand_6
EF-hand_1
Arf
RsgA_GTPase
MMR_HSR1
SRPRB
AAA_22
EF-hand_8
Rad4
Motif
Other DBs
NCBI-GeneID:
110474344
NCBI-ProteinID:
XP_021393378
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All DBs
Position
18:3017164..3042758
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AA seq
707 aa
AA seq
DB search
MKKDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLYHEISQANVICIVYAVNNKNSIDKVTSRWIPLINERTDKDSRLPLILVGNKS
DLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
MKPACIKALTRIFRISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKNLSDG
VADNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTPEYLFPPLKIPPDCTTE
LNHHAYLFLQSIFDKHDLDRDCALSPDELKDLFKVFPYMPWGPDVNNTVCTNERGWITYQ
GFLSQWTLTTYLDVQRCLEYLGYLGYSILAEQESQASAITVTRDKKIDLQKKQTQRNVFR
CNVVGMKGCGKSGVLQALLGRNLIRQRQIRAEHKSYYAINTVYVYGQEKYLLLHDVSDSD
FLTDAETICDAVCLVYDVSNPKSFEYCARIFKQHFMDSRIPCLVVAAKSDLHEVRQEYSI
SPAEFCKKHKMPPPQAFTCNTADVPSKDIFVKLTTMAMYPHARLRCMCACNRCTFCICQN
FLNSDLLQSVKNKLFTAVLNRLRAYLAEVGAMLLADEESRIMQQVHAVHSVEDSIFMESS
LGPRLLEDRHVTQADLKSSTFWLRASFGATVFAVLGFAMYKALLKQR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggacgtgcggatcctgctggtgggagaacccagagttgggaagacatcacta
attatgtctcttgtcagcgaggaattcccagaagaggttccaccccgagctgaagaaatc
accattccagccgatgtcactcctgaaagagtgccaacccacatagtggattattcagaa
gcagagcaaagtgatgagcagctttatcatgaaatatcacaggcaaatgtgatttgtata
gtctatgctgttaacaacaagaattctattgataaggtaacaagtcgatggattcctctc
atcaatgaaaggacagacaaagatagcaggttgcctcttatattagttggaaacaagtct
gatctagtggagtacagcagtatggaaactatccttcccattatgaatcaatatacagag
atagaaacgtgtgtagagtgttcagccaaaaacttgaagaatatatctgagctattttat
tatgcacagaaagctgttctacatcctacaggtcctctttattgcccagaggagaaagag
atgaaacctgcctgtattaaagcactgactcgcatttttagaatttctgatcaagataat
gatggtactctcaatgatgcagagctcaacttctttcagagaatttgttttaatacacca
ctggcacctcaagctttggaagatgtaaagaatgtagtcaggaaaaacctaagtgatgga
gttgcagataatggattgacattaaaaggttttctttttctacacacacttttcattcag
cgaggaaggcatgagacaacttggactgttttgcgccgctttggctacgacgatgacttg
gagcttacaccagagtacctgttccctcccctaaaaattccccctgactgcacaacagaa
ctaaatcatcatgcatacttgtttcttcaaagtatttttgataaacatgatttggataga
gattgtgctttatctcctgatgaattgaaagacttgttcaaagtcttcccttacatgcca
tggggacctgatgtgaacaacacagtttgtacaaatgaaagaggatggatcacataccaa
gggtttctctcgcagtggacactaaccacatacctggatgtgcagcgttgcctggagtac
ctgggttatttagggtactctatacttgcagaacaagaatctcaagcatcagcaattaca
gtgacaagagataaaaagatagacctccagaaaaaacagactcagcgaaatgtcttccga
tgcaatgttgttggaatgaaaggctgtgggaaaagtggagttcttcaagctcttcttgga
agaaatctaataagacagaggcaaatacgtgcagaacacaaatcttactatgccattaat
acagtctatgtatatggacaggaaaaatacttgctgctacatgatgtcagtgactcagac
tttttaactgatgctgagaccatatgtgatgctgtctgcctggtatatgatgtcagtaat
cctaaatcctttgagtactgtgccaggatttttaagcagcacttcatggacagcagaata
ccatgtttggtggtagctgccaagtccgacttgcatgaagttagacaggaatatagtatt
tctcctgctgaattctgcaaaaaacacaaaatgcctccaccccaagcctttacttgtaat
actgctgatgtgccgagtaaggatatctttgtaaaactgacaactatggcaatgtatccc
catgcccggttacgctgtatgtgcgcctgcaacaggtgtactttttgcatctgtcagaac
ttcctcaactcagacttgctgcaatctgtaaagaacaaactcttcactgcagttcttaac
aggttaagagcctacctagctgaggtgggggccatgctgttagcagacgaggagagcagg
attatgcagcaggtgcacgccgtccactctgtagaagattccatcttcatggagtcatct
cttggtccacgtttgcttgaagacaggcatgtgacacaagcggacctcaagagctcaacg
ttctggctccgagcaagttttggtgctactgtgtttgcagttttgggttttgccatgtac
aaagcactacttaagcagcgatga
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