Lonchura striata (white-rumped munia): 110474398
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Entry
110474398 CDS
T05897
Symbol
RERE
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110474398 (RERE)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
110474398 (RERE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
GATA
ELM2
Myb_DNA-binding
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
110474398
NCBI-ProteinID:
XP_021393446
UniProt:
A0A218UHU3
LinkDB
All DBs
Position
21:complement(4677466..4847888)
Genome browser
AA seq
1520 aa
AA seq
DB search
MTADKEKDKDKEKDRDRDRDKERDKRDKARESENSRPRRSCTLEGGAKNYAESEHSEDED
NDNNSATTEESTKKSKKKPPKKKSRYERTDNGEITSFITEDDVVYRPGDCVYIESRRPNT
PYFICSIQDFKLSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVI
KNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNST
QGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAFAG
MCDGGSTEDGCVAASRDDTTLNALNTLHESNYDAGKALQRLVKKPVPKLIEKCWTEDEVK
RFIKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAHRRHRRQAVFRRI
KTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHCFTTTSKDWHHGG
RENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEDDGLSGKHSMRTRRSRGSMS
TLRSGRKKQAASPDGRASPIAEDVRSSGRNSPSAASTSSNDSKAESVKKSTKKIKEEVSS
PLKNSKRQREKAASDTEEPDRSNAKKSKTQEISRPNSPSEGEGEGESSDSRSVNDEGSSD
PKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQVLQAQPQVLQAPSGSAQAAAATPPVPAP
LPAPPPASGAAPAPAQVSPPASQPSGQPQPPAALSHIQQAPALHPPRLPSPHPPLQPLSA
PQSQPAPAAAQPHAQPPLHGAPPAPHGLPAQPLLPHAAPAQPFSLPAQPAQSQVPLQTQA
PSHPHSGLQVTQPVLPGGASLQQAQPPREQPLPPAPMAMPHIKPPPTTPIPQLPAAPAHK
HPPHLSGPSPFSMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLQSSQAQPPV
LTQSQSLPPPASHPPSALHQVSSQPPFSQHPFVPGGPPSITPPSCPSTSTPPTVPGIPLQ
TPISTSAASSGTVPVVTACTLPPIQIKEEVPDEAEEPESPPPPPRSPSPEPTVVDIPSHA
SQSARFYKHLDRGYNSCSRADLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKE
KEKEREREREREREAERAAQKVSSSSHEGRLGESQLSGPAHMRPSFEPPPTTIAAVPPYI
GPDTPALRTLSEYARPHVMSPTNRNHPFFVPLNPTDPLLAYHMPGLYNVDPTIRERELRE
REIREREIRERELRERMKPGFEVKPPELDALHPATNPMEHFARHGALTIPPTAGPHPFAS
FHPGLNPLERERLALAGPQLRPEMSYPDRLAAERIHAERMASLTNDPLARLQMFNVTPHH
HQHSHIHSHLHLHQQDPLHQGSAGPVHPLVDPLAAGPHLARFPYPPGTIPNPLLGQPPHE
HEMLRHPVFGTPYPRDLPGAIPPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGHPHMHGG
HLPSQEDYYSRLKKEGDKQL
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggacaaggagaaagacaaagacaaagagaaggacagggacagggaccgggac
aaggagcgggacaagcgggacaaggcgcgggagagcgagaactcgcggccccggcgcagc
tgcaccttggagggcggcgccaagaactacgcggagagcgagcacagcgaggacgaggac
aatgacaacaacagtgccaccaccgaggagtccaccaagaagagcaagaagaagcccccc
aagaagaagtcgcgctacgagagaaccgacaacggcgagatcacgtccttcatcaccgag
gacgacgtggtgtacaggcctggagattgcgtttatatcgaaagtcgccggccgaacacg
ccctatttcatctgcagcattcaagacttcaaactgagcaagagggaccatctgctgatg
aacgtcaagtggtactaccgccagtccgaggtgcccgactcggtgtaccagcacctggtg
caggacaggcacaacgagaacgattcgggccgggagctggtgatcacagaccccgtgatc
aagaaccgcgagctcttcatctccgactacgtggacacctaccacgctgctgccctcaga
ggaaagtgcaacatctcccatttctctgacatatttgctgctagagagttcaaggcacga
gtggattcatttttctacatcctgggctataatccagagacaaggaggctgaacagtacc
caaggtgaaatcagagttggacccagccaccaggccaagctccctgacctgcagccgttc
ccgtcgccggacggggacacggtgacgcagcacgaggagctggtgtggatgccaggagtc
aacgattgcgacctgctgatgtacctcagggcagccaggagcatggcagcctttgcaggg
atgtgtgacgggggatccacggaggatggatgcgtggctgcctcgcgggacgacaccacc
ctcaacgccctcaacaccctacatgaaagtaactatgatgctggaaaagccctgcagcgc
ttggtgaagaaacctgtgccaaagctgattgagaagtgttggactgaagatgaagtgaaa
cggtttattaagggtttgaggcagtacggcaagaacttcttcagaatccgaaaggagttg
cttcccaataaggagaccggggagctgatcaccttctattactactggaagaagacgccc
gaggcggcgagctcgcgggcgcaccggcggcaccggcgccaggccgtgttccgcaggatc
aaaacccgcacggcctccacgcccgtcaacaccccctccagacccccctccagcgagttc
ttggacctgagctcggccagcgaggatgactttgacagcgaggacagcgagcaggagctg
aagggctacgcctgccgccactgcttcaccaccacctccaaggactggcaccacgggggc
cgggagaacatcctgctgtgcacggactgccggattcacttcaagaagtacggggagctg
ccgcccatcgagaagcccgtggaccccccaccctttatgttcaagcctgtgaaagaggaa
gacgatggcctcagtgggaagcatagcatgaggacacggcggagtcgaggctcgatgtcg
accctacgcagtggcaggaagaagcaggcagccagccccgatggccgcgcctcccccatc
gccgaggacgtgcgctccagcggccgcaactcgcccagcgccgccagcacctccagcaac
gacagcaaggccgagtccgtgaagaaatccaccaagaagatcaaagaagaggtatcttct
cctctcaagaactccaagaggcagcgggaaaaagcagcatctgacacggaagaacctgac
aggtccaatgccaaaaaatccaaaactcaagagatcagcaggcccaactccccctcggag
ggcgagggcgaaggcgagagctccgacagccgcagcgtcaacgacgagggcagcagcgac
cccaaggacatcgaccaggacaaccgcagcacgtcccccagcatccccagcccccaggac
aacgagagcgactcggattcctcggctcagcagcaagtgctgcaggcgcagccccaagtg
ctgcaggccccgagcggctctgcccaggccgccgctgccacgccgccggtgccggccccg
ctgccggcgccgccgcccgcgtccggcgccgccccggcccccgcgcaggtgtcgccgccg
gcgtcgcagccctcggggcagccgcagccccccgcggccctctcgcacatccagcaggcc
cccgcgctgcacccgccgcggctgccctcgccgcaccctccgctgcagcccctgagcgcg
ccgcagagccagcccgcgcccgccgcggcgcagccgcacgcgcagcccccgctgcacggc
gcgccgcccgccccgcacgggctgccggcccagccgctgctgccccacgccgcgcccgcc
cagcccttctccctgcccgcccagcccgctcagtctcaggtgcccctccagacgcaagcc
ccgtcccacccgcactcgggcctgcaggtgacgcagcccgtgctgcccggcggcgcctcg
ctgcagcaggcgcagcctcctcgcgagcagccgctgccgcccgcccccatggccatgcct
cacatcaaacctccccctaccacccccatcccgcagctgcccgctgctccggcccacaag
caccctccccatctctccgggccgtctccgttctccatgaactccaacctgcctccgccg
cccgctctgaagcctctgagctcgctctcgactcaccaccctccatccgcacaccctcct
cccctgcagctgatgcctcagagccagccgctgcagtcctcgcaggcgcagcctcccgtt
ctgacccagagccagagccttccccctcctgccagccaccccccgtctgcgctccatcag
gtctcctcccagccccccttctctcagcacccctttgtgcccgggggccccccttccatc
acgcctccttcgtgcccctccacctccacgccgcccaccgtgcctggcatccctctccag
acccccatctccacgtcagcagcttctagcgggacagtgcccgtggtgacagcctgcacg
ctgccacccatccagatcaaggaggaggtgcccgatgaagctgaggagccggagagccct
ccccctccaccccggagtccctccccagagcccaccgtggtggatatcccgagccacgcc
agtcagtcagccaggttctataagcacctggaccgtggctacaattcatgctccagggca
gacctgtacttcatgcctctggcaggatccaagctggccaagaagagagaagaggccatt
gaaaaggccaaaagggaagcggagcaaaaagccagggaagagagggaaagagaaaaagag
aaagagaaggaaagagagagggagcgtgagcgcgagagagaagcagaaagagctgcgcag
aaggtgtccagctcctcccacgagggccgtctcggcgagtcccagctcagcgggccggcc
cacatgcggccatccttcgagccccccccgaccaccatcgcggccgtgcccccctacatc
gggccggacacgccggcgctacggacgctgagcgagtacgcgcggccccacgtcatgtcc
ccgaccaaccgcaaccaccccttcttcgtgcccctcaaccccacggacccgctgctggcc
taccacatgcccggcctctacaacgtggaccccaccatccgcgagcgggagctgcgcgag
cgcgagatccgcgagcgcgagatccgcgagcgggagctgcgcgagaggatgaagcccggc
ttcgaggtgaagcccccggagctggacgcgctgcacccggccaccaaccccatggagcat
ttcgccaggcacggggcgctgactatcccacccacggcggggcctcaccccttcgcctcc
ttccacccggggctgaaccccctggagagggagagactggcgctggcggggccgcagctg
cggccggagatgagctacccggacaggctggcggctgagcgcatccacgccgagcgcatg
gcctcgctcaccaacgaccccctggcgcggctgcagatgttcaacgtcaccccccaccac
caccaacactcacacatacactcgcatctacacctacaccagcaggaccccctacaccaa
ggctcagcaggacctgttcatccactggtggatcctttagcagctggaccccacctggca
cgttttccctacccacctgggaccatccccaacccattgctagggcagccacctcacgag
catgaaatgctccgacatccagtctttggtactccctaccctcgggatctgcctggtgcc
attccacctcccatgtcagcagcccaccagctgcaggccatgcacgcccagtccgcagag
ctgcaaagactggcaatggagcagcagtggttgcacgggcaccctcacatgcacggtggg
cacctacccagtcaggaagattattacagtcgactgaaaaaagaaggcgacaaacagttg
taa
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