Lonchura striata (white-rumped munia): 110474445 Help Entry 110474445         CDS       T05897                                  Symbol ABCA5 Name (RefSeq) cholesterol transporter ABCA5   KO K05648   ATP-binding cassette, subfamily A (ABC1), member 5 Organism lsr  Lonchura striata (white-rumped munia) Pathway lsr02010   ABC transporters Brite KEGG Orthology (KO) [BR:lsr00001]  09130 Environmental Information Processing   09131 Membrane transport    02010 ABC transporters     110474445 (ABCA5)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02000 Transporters [BR:lsr02000]     110474445 (ABCA5) Transporters [BR:lsr02000]  ABC transporters, eukaryotic type   ABCA (ABC1) subfamily    ABCA5, 6, 8, 9, 10 subgroups     110474445 (ABCA5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ABC_tran ABC2_membrane_3 AAA_21 R1_ABCA1 RsgA_GTPase AAA_29 AAA_16 MMR_HSR1 nSTAND3 Dynamin_N AAA_23 ATP-synt_ab Rad17 Motif Other DBs NCBI-GeneID:  110474445 NCBI-ProteinID:  XP_031362263 LinkDB All DBs Position 18:complement(4595570..4635177) Genome browser AA seq 1551 aa AA seqDB search MAPGAPGGAGVWRQTRALLFKNCLLKCRTKKSSVQEVLFPLFFLFWLILMSMMAPPCPAA ACSSLRRSCDSVTYWSSGFTALQACIDAAIIQLKTNHSVWEQLDLTRAVVMGEDAVVEID NFPRAIILIYLVIAFSPFGYYLAIHIVAEKERKLKEFLKILGLHDTAFWLSWVLLYVSLI FVMSILMAVIATASSLFPQSSAFVIFLLFFLYGTSSVFFALMLTPLFKKSKHVGIVEFLA TLVFGFVGLNIVLLEDFPKSFVWILSPLCQCSFLIGVAQVMHLEDYEDGATFANINAGPY PLCISLILLVLDSIFYLLVAVYLDQVMPGEFGLRRTPFFFMKPSFWSKHRKNYKELYESS TNGSLSCSEIVEPVPAEFQGKEAIRISSVQKTFRKKGETVEALRNLSFDIYEGQITALLG HSGTGKTTLMNILCGLCPPSDGFVSVYGHRVSEIDEMLEVRQITGVCPQADIHFDILTVE ENLSIFAAIKGIPQNDLIQEVQKVLLDLEMQPIRDNQAKKLSRGQKRRLSVGVAVLGNPK VLLLDEPTAGMDPCSRHIVWNLLRSRKANRVTVFSTHFMDEADILADRKAVISQGMLKCL GSSLFLKSKWGIGYRLSMHIDAYCNTEATTSLIRQHIPAASLIQQSSEQLVYSLPLRDMD KFAGLFSDLDTHSHLGVITYGVSMTTLEDVYLKLEVEAEIDQADYSVFHSQQAQEEVDTK SLDDMEQSLLMLSEAKAPATSNSALWKKQVATIAKVHFLSLKRENKCVRVMLLLFLIFLV VQILLFFIHHIIKNAVAAIKLSPDLYLLKPGENYHKYRSRLLLQNSTESDISDIVHSLGS MNILWEMFNDSDYVSVAPHSAALNVFALQSRQNYVFNIIFNSTMVHSVPVLMNIVSNLLL RSLNVTESIQIWSNPLIQDLPDTIFRLEIYFEAVLLGIIITGMPPYFAMDNAENHKIKAY TQLKIAGLYPSAYWAGQAVVDLPLFFSILTLMIGSLFAFHYGVYFYVGKFLAVIFCLIGY VPSVVLFTYVVSFTFKKVQNTKEFWSFIFSVTALLCTVVTEVSFFLDHYLVTTILHYVFS ISIPIYPLIGCLICFIKVSWKGKSVSAGYQDPWDRLLVAVLAPYLQCVLWLFLLRCFELK NGGRTVREDPFFRKCFTKAKPWKFPDVPHEGSEDEDVRAERLRVREILSSPRSEEMPAIL VSSLHKEFDERKEFLPGRKIKKVATKHVSLCVKKGEILGLLGPNGAGKSTLINMLVGEIE PTSGQVLMGDDSLGLSSEEDSVKFVGYCPQTNPLWPDITLQEHFEIYGAIKGMSQSDVQE VIKRIASVLDLKDHLQKTTKKLGMGLKRKLCFALSMLGNPRVTLLDEPSTGMDPKAKQHM WRAIRAAFKNKERAAILTTHYMEEADAVCDRVAILVSGQLRCIGTVQHLKSKFGRGYFLE MKLGEAADVQQVEYLQNQILHIFPNASRQESFASILAYKIPKEDVQSLSHSFSKLEEVKH TFNIEEYSFSQATLEQVFVELAKEQEEEDSSFGTLNSSLWWERTQEDRVIF NT seq 4656 nt NT seq  +upstreamnt  +downstreamnt atggccccgggcgcgcccggcggggcgggagtgtggcggcagacgcgggcgctgctcttc aagaactgcctgctcaagtgcaggaccaagaaaagcagcgtgcaggaggtgcttttcccc ctgtttttcctcttctggctgatcctgatgagcatgatggctcccccgtgtcccgcagcc gcctgctccagcctgcgcaggagctgcgactccgtcacctactggagctcgggcttcacg gcgctgcaggcctgcatcgacgcggccatcatccagctgaagacaaaccattctgtttgg gagcagctggatctgaccagagccgtggtgatgggagaggatgccgtggtggaaattgat aatttccctcgtgcaatcattttaatttacctggtgattgcattctccccctttgggtat tatttggcaattcacatcgtggcagaaaaggagaggaagctgaaggagttcttgaaaatt ttgggactccatgacactgccttctggctgtcctgggtgctgctctacgtgagcctgatt tttgtcatgtccatcctcatggccgtgatcgccacggcctcgtccctcttcccccagagc agtgcctttgtcatattcctcctttttttcctctatggaacctcctctgttttctttgcc ctgatgctgacccctctgtttaagaagtccaagcacgtggggatagtggagttcctggca actctggtttttggcttcgtgggcctcaacatcgtcctgctggaggatttccccaaatcc ttcgtgtggatcctcagccctttgtgtcagtgcagcttcttgattggtgttgctcaggtc atgcatctggaggattatgaggatggggcaacatttgcaaacatcaatgctggtccttac ccactctgcatctctctgattctcctggtgctggacagcatcttttacctgcttgtagct gtttaccttgaccaggtgatgccaggggagtttggcctgcgccgcacgccctttttcttc atgaagccctccttttggtccaagcacaggaagaactacaaggagctctacgagagcagc accaacggcagcctgagctgcagtgagatcgtggagcccgtgcctgcagaattccagggc aaggaagccatcagaatcagctctgttcagaaaacattcaggaaaaagggagaaaccgtg gaggctctcagaaatttgtcctttgacatctacgaggggcagatcacggcgctgctgggc cacagcggcaccgggaagacgacgctgatgaacatcctctgcgggctctgccctcccagc gacgggtttgtctcagtctatgggcacagagtgtctgagatcgacgagatgctggaggtg cggcagatcacgggagtgtgcccccaggccgacatccacttcgacattttaactgtggag gagaacctctccatctttgctgccatcaagggcatccctcagaacgatttgatacaagag gtgcagaaggtgttgctggatttggagatgcagcccatcagggacaatcaagccaaaaaa ttaagtagggggcagaagaggaggctgtcagtgggagttgctgttcttgggaaccccaag gtcctgctgctggacgagcccacggcggggatggatccctgctcccgccacatcgtctgg aacctgctgaggagcaggaaggccaaccgtgtgactgtgttcagcacccacttcatggac gaggctgacatcctggctgatcgtaaagctgtgatttcccaagggatgctgaaatgcctc ggctcttcccttttcctcaagagcaagtggggcattggctaccgcctgagcatgcacatc gatgcctactgcaacacagaggccaccacctctctgatcaggcagcacatccctgcagcc agcctgatccagcagagcagcgagcagctcgtgtacagcctccctctcagggacatggac aagtttgcaggtttgttctcggacctggacacccattcccacctgggcgtcatcacctat ggcgtgtccatgaccacgctggaggacgtttacctgaagctggaagtggaggcagagatt gatcaagcagattacagcgtgttccactcgcagcaagcccaggaggaggtggacacgaaa tccctggatgacatggagcagagcctgctgatgctctctgaggccaaggcaccagccacg agcaactcagccctgtggaagaagcaggttgccaccatagccaaagtgcacttcctcagc ctgaaacgggagaacaaatgtgtcagagttatgttgttgcttttcctcattttccttgta gttcagattttgttgtttttcatacaccacatcatcaaaaatgctgtagctgctatcaaa ctctccccagatttgtacttgctgaagcctggagagaactatcacaagtacaggagtcgg ctcctgctgcagaactccacagagtcggatatcagtgacattgtgcactccctggggagc atgaacatcctctgggagatgttcaatgacagtgactatgtctcagtggcacctcacagt gcagctctgaatgtctttgccctccagtccaggcagaattacgttttcaacatcatattc aacagcaccatggtgcattccgtgccagttctgatgaatattgtcagcaacctcctcctg cgcagtttgaacgtgactgagagcatccagatctggagcaaccccttgattcaggatctc ccagacacaattttcaggctggagatctattttgaagccgtgttactggggatcatcatc acggggatgccaccctacttcgccatggacaacgcagaaaaccacaagatcaaggcttac acccagctgaagattgcagggctctatccctcggcttactgggctggccaggctgtggtg gacctgcctctgttcttctccatcctcaccctgatgattggcagcctcttcgccttccac tacggcgtttacttctacgtgggcaagttcctggctgtgattttttgcctgattggttat gtcccctcagttgtgctcttcacctacgtggtctccttcaccttcaaaaaagtccagaac acgaaggaattttggtcatttatattttcagtgacagccttgctctgcacggtagtcact gaagtgtcctttttcctggaccattacctggtgaccaccatcctgcattatgtcttctcc atctccattcctatttatccccttattggctgcctgatctgttttataaaggtctcgtgg aaaggcaagagtgtgagtgcagggtaccaggacccctgggaccggctgctggtggcagtt ctggctccctacctgcagtgcgtgctgtggctgttcctgctgcgctgcttcgagctgaag aacggaggcaggacggtgagagaagatcccttcttcaggaaatgtttcaccaaagccaag ccctggaagttcccagatgtgccccacgaggggagcgaggacgaggacgtgagggcagag aggctgcgagtccgagagatcctgagcagccccaggagtgaggagatgccagcaatcctg gtcagcagcctgcacaaagagtttgatgaaaggaaggaatttcttccgggcagaaaaata aagaaagtggcgaccaaacatgtttccctctgtgtgaagaaaggagaaatcctgggtttg ttgggacccaatggagctgggaaaagcacattaattaatatgcttgttggagagattgag ccaaccagtgggcaggttctgatgggagatgattccttggggctgagcagtgaggaggat tcagtgaaattcgtggggtactgtcctcaaacaaatcctctctggccagatatcacattg caggagcactttgagatttatggtgccatcaaaggcatgagccagtctgatgttcaagag gtcatcaagcgcatcgccagcgtgctggatttaaaggaccacctgcagaagacgacgaag aagttgggaatggggctgaaacgcaagctctgctttgccctcagcatgctgggcaacccg cgggtgacgctgctggacgagccctccaccgggatggaccccaaggccaagcagcacatg tggcgggcgatccgagcagcctttaagaacaaggagagagcagcaatcctgaccacgcac tacatggaggaggcagatgctgtctgtgaccgtgtggccatcctggtgtcagggcagctc aggtgtataggtactgtccaacacctgaagagcaagtttggcagaggatacttcttggaa atgaaattaggggaagcagcagatgtgcagcaggtggagtatctgcagaaccagattttg cacatcttccccaacgccagccgccaggaaagttttgcttctatcttggcgtataaaatt cctaaagaagatgtacagtcactttcacattctttttccaagctggaggaagtaaaacac accttcaacatcgaggagtacagcttttctcaagcaacactggaacaggtgtttgtggag ctggctaaagagcaggaggaggaggacagcagctttggcaccctgaacagcagcctgtgg tgggagaggacgcaggaggaccgagtcattttctga

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