Lonchura striata (white-rumped munia): 110474453
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Entry
110474453 CDS
T05897
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 10
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110474453
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsr02000
]
110474453
Transporters [BR:
lsr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
110474453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
Rad17
AAA_22
SMC_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
110474453
NCBI-ProteinID:
XP_031362237
LinkDB
All DBs
Position
18:complement(4531386..4557707)
Genome browser
AA seq
1635 aa
AA seq
DB search
MKALQRNISVLQQIKILLWKNVMIKWRMKMQSFQEWILSLLFLPLVFVVSSSPFMMKAQL
PEVPSAHLSYLDDPAFNASGVTVAFTPATATTRHIMNKVASSSLMTGIKLVELDDERAME
KTWISNRETIGVVFKDNFSYHLRFPTTHVVIPNEVIGYIDTCYNFSWSICESPRYWYKGF
LSLQSSIDAAIIEMVANHSVWEEMESIAGVRMKSRSILFSISLEYSYFMMVIMMCFFPFM
YFLSRNVTREKKQLKELMKTMGLHDIAFWLSWSLLYSLYVLIFSCLLTALVLRERFYASS
FPAVSLLFFLYGLACIHLVFMLCSLLRTSKIVSCMGFFIIFIFGFLGLAVLIEDVPEPLK
WFLGLMCSFAFNTAIAKIFDLEKYGIGFSFSNLMGEAHFLFSTYILLVFDSVLYMLLALY
FDKILPGKYGIPDPPLFFLKASYWMRSRRRSSRDEPRATENPEELLGDDVEPVPPEFLGK
EAIRLHNIKKAYKKKDEKTEALRGLSLNVYEGQITALLGHSGAGKTTLLNVLSGLSFPSA
GSATIYNYKLSEMGDREEIRSMIGICPQFNPQFEVLTVKENLKTFAEIKGIKSKEVEREV
QNILELLDISNIQDTQAEKLSGGQKRKLSIGIAMLGNPQVLFLDEPTAGLDPLSRHRVWS
VLREQRAGRVVLFSTQLMEEADILADRKAFISHGRLKCVGSSLFLKKKWGICYHLRIHVS
ESCDLENVTSLVKGYIPNATFSGHTQYELRYKLPLENVNKFPDLFSGLDSCSEQGAACCX
LVNYGVSMTTLEDVFLRLEGEAMADQEGEPVPGEEWGAAGSPEEARPGSLLLSDTGTSSL
QGLALWRQQVSATARVHFLKLRSSVKNLRSILLLYVVFLLPLVLQVCMVAGWQSVSAWQL
SPARYFLPLGRRSYLETTTLLVYNHTGTDVDDFIHVLQSQDIAVEIAKEENITEELEHNG
AIVLFREGQSYRFTVLCHLEAINCFPVLVNVISNALLRSLNSTRHIQVWSHPFFSLVNPG
YWDYIMSFYLIYMLLLLPGFPPHFAMGYTQDCKVGARAQLRVSGLFPSAYWCGQALVDIP
LCWILLFSMLGLQFAMSNMISGNASVTLLLVTGMLGYGISLVLLIYVISFNSRKEWSCDL
WSFILIVVCFISLFISRIINNLGTLTSLYTLSLLVPVYPLMGFAIHLVFDSHNFMQDSES
FGAASGSHILIAVFAPYIHSVVFILLLRFLELKYGKAVLRQDPIFRISPRKESSQQHPKE
LEEEDEDVRAEREAVRNAVVAPSQEEKSAIIVSNLCKEYKIKKAGSLFKKKKKTATKNLS
FCVKKGEVLGLLGPNGAGKSTAIKMITGETTPTAGQVLMTRGDGGGSLEQAPAFLGYCPQ
ENPLWLDLTPQQHLRVYAAVKGLQQEDAAAAVHRIVNALQLQDYLNKKVRKLPAGITRKL
CVALSLLGNPSVLLLDEPSTGMDPNGQRCVWKTIQDALKSKESGALLSTQYMEEAEAVCD
RVAILVSGQLRCIGSIQYLKNKFGKGYLLEIKVKDAESTDALHAEILKIFPGAARQERCP
SLLVYKIPMKDALPLSQSFSKLEEAKRSCSLEEYSFSLNTLTQVFLELCREQEKDNFDLT
LDGTFDWKQLQQEDC
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcactccagaggaatatcagtgtattacagcagattaaaattctcttgtggaaa
aatgtcatgatcaagtggaggatgaagatgcagagctttcaggagtggattctgtccctg
ctcttcctgcccctggtgttcgtggtgtcctcgtccccgttcatgatgaaagcccagctc
cccgaagtgccctccgcccacctgagctacctggatgaccctgccttcaatgccagcggg
gtcaccgtcgccttcacccccgccactgccaccaccaggcacatcatgaacaaagtggcc
tccagctccctcatgacgggtataaaactagtggaactggatgatgagagagccatggag
aaaacctggatttcaaatagggaaactataggagttgtatttaaggacaacttctcctac
cacctcaggtttcctaccacccatgtggttattcccaatgaagtcattggatacatagac
acctgctacaacttctcctggagtatttgtgagagcccaaggtactggtacaaaggcttc
ctgtccctgcagtccagcattgatgctgccatcatagagatggtggcaaatcattctgtt
tgggaagaaatggaatccattgctggtgtgaggatgaagtcccgaagcatcctcttctcc
atcagcctggagtacagctacttcatgatggttatcatgatgtgcttcttccctttcatg
tacttcttatcaaggaatgtcacacgagaaaagaagcagctcaaagaactgatgaagacc
atgggcctgcatgacattgcattttggctgtcctggagtttgctgtactccctttatgtg
ctgatcttctcctgcctgctgacggccctcgtgctgcgggagcgcttctacgccagcagc
ttccctgcagtctcactgctcttcttcctctatggcctggcctgtatccacctggttttc
atgctctgctccctcttaaggacctccaagattgtcagctgcatgggcttcttcatcatc
tttatcttcgggttcctgggcctggcggtgctgatagaggatgtccccgagccgctgaag
tggttccttggtctcatgtgttcttttgcattcaacactgccatcgccaagatttttgat
ttagagaaatatggaataggtttctccttttccaaccttatgggggaagcacacttttta
ttttcaacatacatcctgctggtgtttgactcagtcttgtacatgctgctggctctgtat
ttcgacaaaattctgccaggcaaatatgggatcccagaccctcctttgttcttcctgaag
gcctcgtactggatgaggagcaggagacgctccagcagggacgagcccagagccacagaa
aaccctgaggagctccttggggatgatgtggagcctgtgccccccgaattcctggggaaa
gaggccatcaggcttcacaatattaaaaaagcctataagaagaaggatgagaagacagaa
gctttaagaggtctgtctttaaacgtttatgagggtcagatcaccgccttgctgggccac
agtggggctggaaagacaacgctgctgaacgtgctcagtgggctcagcttcccttcagca
ggctctgctaccatttacaactacaaactctctgaaatgggagacagggaggagatcagg
agcatgatcgggatttgcccacagttcaacccgcagtttgaggtcctgacggtgaaagaa
aacctgaaaacttttgcagaaatcaagggcatcaagtccaaagaggtggagcgagaggtg
caaaacattctggagctgctggatatcagcaacattcaagacacacaagctgaaaaactg
agtggtggacagaaaaggaagttatccattggaatagccatgcttggaaacccccaggtt
ctgttcctggacgagcccacggcggggctggatcctctctccaggcaccgggtgtggagc
gtcctgcgcgagcagcgggcggggcgggtggtcctgttcagcacccagctgatggaagag
gccgacatcctggcggaccgcaaggctttcatctcgcacgggaggctgaagtgtgtcggc
tcttctctgttcctgaagaaaaaatgggggatttgctatcatttaaggatccatgtcagt
gaatcttgtgacctggagaatgtgacatccctggtgaaagggtacatccccaatgccacg
ttctcaggacacacccagtatgaactgagatataaactgcctttagaaaatgtgaataaa
ttcccagatctgttcagtggcctcgacagctgctctgagcagggagcagcttgctgttga
ctcgtcaactacggagtcagcatgacaaccctggaggacgtgttcctgcggctggaggga
gaagccatggctgatcaggaaggtgagcccgtccctggggaggagtggggagcagcagga
agccctgaggaggccaggccaggctccctgctgctctcggacaccggcacgtcctcgctg
cagggcctggccctctggaggcagcaggtctctgccacggcacgcgtgcacttcctgaag
ctcaggagctcggtgaagaacctgcggtccattttgctgctctatgtggtttttctgctt
cctctggtgttgcaagtgtgcatggtagctggctggcagagtgtgagcgcctggcagctc
tctcctgcacggtacttcttgcccctggggaggagatcctacctggagaccaccaccctc
ctggtctacaaccacacaggcacagacgttgacgacttcatccatgtgctgcagagccag
gatattgcagtggaaatagcaaaggaggaaaatatcacagaggagctggaacacaacggc
gccatcgtactgttccgtgaaggtcagagctacaggttcactgtgctgtgccacttggaa
gctatcaactgcttcccagtgctggtgaacgtcatcagcaacgccctgctgagatccctc
aactccaccaggcacatccaggtctggagccaccccttcttctctctggtcaatccagga
tactgggattatattatgtccttttacctaatttatatgctgctgttactccctggtttt
cctcctcacttcgcaatgggttacacacaggattgcaaggtgggagctcgtgcccagctg
cgggtctcagggctctttccctcagcctactggtgtggccaggctctggtggacatccct
ctctgctggatcctgctcttctccatgcttgggctccagtttgccatgagcaacatgatt
tctggcaatgccagcgtcaccctcttgctggtcacggggatgttgggttatggaatttcc
ctcgttctcttaatctacgtgatctccttcaactctcgcaaagaatggagctgtgatctt
tggtcttttatcctgatagtggtgtgctttatttctcttttcatcagcagaatcatcaac
aacctgggaaccctcacctccctctacactttgtccctcttggttcctgtgtaccccctg
atgggttttgcgatccatcttgtgtttgactcccacaattttatgcaggacagtgagtca
tttggtgcagcttcaggcagtcatatactgattgctgtctttgcaccttacatccattct
gtggtgttcattcttcttcttcgctttctggagttaaaatatggaaaagcagtgctgaga
caggaccccatatttaggatttccccaagaaaagaaagcagccagcagcaccccaaggag
ctcgaggaggaagatgaagatgtcagagctgaaagggaagcagtgagaaatgctgtggtg
gctcccagtcaggaggagaaatcagccattatagtcagcaatctgtgcaaggaatataaa
ataaagaaagctggctcactttttaagaagaagaagaaaacagccaccaaaaacctttcc
ttctgtgttaaaaaaggagaagtgttaggacttctggggcccaacggagctgggaaaagc
acagctatcaaaatgatcactggagagacaaccccgactgctgggcaggtgctgatgacg
aggggagatggaggaggctccctggagcaggctcctgccttcctgggatactgcccccag
gagaacccgctctggctggacctcaccccgcagcagcacctcagggtctacgcggccgtc
aaggggctgcagcaggaggacgcggctgctgctgtccacagaattgtgaacgctctgcag
cttcaagactacttaaacaaaaaagtcagaaaattacctgctggcataaccagaaagctg
tgcgtggcactgtccttgctgggcaatccctccgtgctgctcctggacgagccctccacc
ggcatggatcccaacgggcagcgctgtgtctggaaaacaatccaggatgccctgaaaagc
aaggagtcaggagccctcctgagcacgcagtacatggaggaggcagaggccgtgtgtgac
cgtgtggccatcctggtgtccgggcagctccggtgcattggctccatccagtacctgaag
aacaagtttggcaaaggatatctcctggaaatcaaggtcaaggatgcagagagcactgat
gctctgcacgctgagattctgaagatcttcccaggtgcagcccgccaggagaggtgcccc
tctttgcttgtctacaagatcccaatgaaagatgccctgcccctgtcccagtccttctcc
aagctggaggaagccaaacgaagctgcagcctcgaggagtacagcttctccttgaatact
ctgactcaggtgtttctggagctctgccgagagcaggaaaaggataattttgatctgact
ttggatggcacttttgactggaaacagctgcagcaggaggactgttaa
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