Lonchura striata (white-rumped munia): 110474473
Help
Entry
110474473 CDS
T05897
Symbol
FBXO42
Name
(RefSeq) F-box only protein 42
KO
K10317
F-box protein 42
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110474473 (FBXO42)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110474473 (FBXO42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_5
Kelch_1
Kelch_2
Kelch_6
NANM
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
110474473
NCBI-ProteinID:
XP_021393593
UniProt:
A0A218UI68
LinkDB
All DBs
Position
21:340070..390955
Genome browser
AA seq
705 aa
AA seq
DB search
MASSSDSDDDGFMAVDPEDAAVEGTMEQEDEPHAELEVEEPRPSSRSMLELPEEVLEYIL
SFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFIKAVQEGNIQWESRTYPYPGTPITQR
FSHSACYYDPNQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATL
VVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIMTTHGPPPMAGHSSCV
IEDKMIVFGGSLGSRQMSNDVWVLDLEQWAWSKPSISGPSPHPRGGQSQIVIDNETILIL
GGCGGPNALFKDAWLLHMQANPWTWQPLKVENEDHGAPELWCHPACRVGQCVVVFSQAPS
GRAPLSPSLNSRPSPISATPPALVPETREFRSQSPVRNTDEAPCVNGRWGTLRPRRQTPS
GSREGSLSPARGDSSPVLNGGTVSPGAAPAGGASLDSPVQALSPSTPSAAEGFDLKVGPA
LAPRRGSLPEQRDLRLASVELGWEQKPTSLLCQLDGAEGRTAGTRNPPEHTNGIHTPPHA
ALPGAVSPGALRRSLEAVKALSSKAASASAALSPPLASSPGSPGAEPGSVRPSVTQGEGH
SLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEQGRVKWKVFNSSSVVG
PPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcctcggacagtgacgatgacgggttcatggccgtggatccagaggacgcc
gcggtggaagggacgatggagcaggaggatgagccccacgccgagctggaggtggaggag
cccaggcccagctccagatcgatgctggagctgccagaagaggttttggaatacatcctg
tccttcctctctccctaccaggagcacaaaaccgccgcccttgtctgcaaacagtggtat
cgactgatcaaaggtgtggcccatcagtgctaccacggcttcatcaaggcagtgcaggag
gggaacatccagtgggagagccgcacttacccctaccccggcacccccatcacccagcgc
ttctcccacagtgcgtgttactacgaccccaaccagtccatgtacgtgttcgggggctgc
acccagagcagctgcaacgccgccttcaacgacctctggagactggacctcaacagcaag
gagtggatccggcccctggcctcaggttcctacccctctcccaaggctggggccacgctg
gtggtctacaaggacttgctggtgctttttggggggtggacccggccgagcccttacccc
ctgcaccagcccgagaggttcttcgatgagatccacacgtactccccctccaaaaactgg
tggaactgcatcatgaccacccacggcccccctcccatggcaggacactcctcctgtgtc
attgaagacaaaatgatcgtttttgggggctccctcggatcccgacagatgagcaacgac
gtctgggtgctggatctggagcagtgggcttggtccaagcccagcatctcggggcccagc
cctcacccgcgcgggggccagtcccagatcgtgatagacaacgagaccattctaatcctg
ggaggctgtgggggtcccaatgcactgttcaaagacgcctggctgctgcacatgcaggcc
aacccctggacgtggcagccgctcaaggtggagaacgaggaccacggagccccggagctg
tggtgccatcctgcctgcagggtgggacagtgtgtcgtggtcttcagccaagctcccagc
ggcagagccccgctgagccccagcctcaactcccgcccgtctcccatcagcgccacgccg
cccgccctggtgcccgagacgcgggaattccgctcccagtctcccgtcaggaacacggac
gaggctccctgcgtcaacggccgctggggcaccctgcggccccgcaggcagacgccgtcg
ggctcgcgggagggcagcctgtccccggccagaggggacagttccccggtgctcaacggc
ggcacggtgtcacccggagcggcgccggccggcggggcctccctggacagccccgtgcag
gccctgtcccccagcaccccctcggccgccgagggattcgacctcaaggtggggccggcc
ctggcgccgcgccggggctcgctgccggagcagagggatctgcgcctggcctccgtggag
ctgggctgggagcagaagcccacgtccctcctgtgccagctggacggcgcggagggcagg
acagcgggcacgcggaaccccccggagcacaccaacggcatccacacgccgccccacgcc
gccctgcccggggccgtgtcccccggcgcgctccgccgcagcctggaggccgtcaaagcc
ctctcctccaaagctgcctcggcctcggccgcgctgagccctcccctggcctcgtccccg
ggctccccgggcgccgagccgggctccgtgcggccgagcgtcacccagggcgaggggcac
tcgctgccccccatcgcccggcgcctcgggcaccacccgccgcagtcgctgaacgtgggc
aagccgctgtaccagagcatgaactgcaagcccatgcagatgtacgtgctggacattaag
gacaccaaggagcagggacgagtcaagtggaaagtgttcaacagcagctccgtggtgggg
ccgcccgagaccagtttacacacggtggtgcaaggccgaggggagctgatcatattcggt
ggcctgatggacaagaaacaaaacgtcaaatattaccccaaaacaaatgccttgtacttt
gtgcgagcaaagagataa
DBGET
integrated database retrieval system
