Lonchura striata (white-rumped munia): 110474527
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Entry
110474527 CDS
T05897
Symbol
SOCS1
Name
(RefSeq) suppressor of cytokine signaling 1
KO
K04694
suppressor of cytokine signaling 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04120
Ubiquitin mediated proteolysis
lsr04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110474527 (SOCS1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
110474527 (SOCS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110474527 (SOCS1)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
110474527 (SOCS1)
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Gene cluster
GFIT
Motif
Pfam:
SH2
SOCS_box
SH2_1
Motif
Other DBs
NCBI-GeneID:
110474527
NCBI-ProteinID:
XP_021393672
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Position
14:complement(3728974..3731764)
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AA seq
207 aa
AA seq
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MVAHSKVSADNALGADPRRLLDPPARDCSQARGFQGPGRPGTVQAQGNTHFRTFRSQADF
SSITRASSLLDACGFYWGPLTVSAAHEKLKSEPEGTFLIRDSTQKNCFFAISVKTATGPT
SIRINFQTGRFSLDGSKESFDCLFKLLEHYLSSPRKVLVAPLRKVRVQPLQELCRKSIVK
TFGRENLNQIPLNPVLKDYLKSFPFQI
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggtagcgcacagcaaggtgtcagcagataatgcacttggagcagacccaagaagactt
cttgaccctccggcacgggattgctcacaggcacgaggcttccagggccccggccggccc
ggcactgtgcaggcacagggcaacacacacttccgaacctttcgctcccaagcggatttc
agtagcatcactcgagccagcagcctgctggatgcctgtggcttctactgggggcctctg
actgtcagtgctgcccacgagaagctgaagtctgagcccgagggcaccttcctcatcagg
gacagcacacaaaagaattgcttctttgccatcagtgttaagactgcaactggacccacc
agtatccggattaactttcagaccgggcgtttcagcctggatggcagcaaagagagtttt
gactgtctttttaagctgctggaacattacctaagctcccctaggaaggtactggttgcc
ccccttcgcaaggtccgggtgcagccactgcaggagctctgccggaaaagcatcgtgaag
acttttggaagagagaacttaaatcagatcccactcaatcctgttttaaaggactacctg
aaatccttcccatttcagatataa
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