Lonchura striata (white-rumped munia): 110474547
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Entry
110474547 CDS
T05897
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03020
RNA polymerase
lsr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110474547 (POLR2D)
09124 Replication and repair
03420 Nucleotide excision repair
110474547 (POLR2D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110474547 (POLR2D)
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110474547 (POLR2D)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
110474547 (POLR2D)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110474547 (POLR2D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Maelstrom
Motif
Other DBs
NCBI-GeneID:
110474547
NCBI-ProteinID:
XP_021393702
UniProt:
A0A218UIK3
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Position
9:22782076..22785379
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AA seq
142 aa
AA seq
DB search
MAAGGSDPRTADVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcggcagcgacccgcggacggcggacgtggaggaggacgcctcgcagctc
gtcttccccaaagaatttgaaactgcggaaactctgctgaactccgaggtgcacatgctg
ctcgagcaccgcaagcagcagaacgagagcgcggaggatgagcaggagctgtcagaagtc
ttcatgaaaaccttgaactacacagcgcgcttcagccgcttcaaaaaccgcgaaaccatc
gccagcgtgcgcagcttactgctacagaagaagctccataagtttgaactggcatgtttg
gctaacttgtgtcctgagacagctgaggaagcaaaagctctgattcctagcctggagggc
cggtttgaagatgaagaattacaacagattcttgacgacattcagactaaacgcagcttc
cagtattaa
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