Lonchura striata (white-rumped munia): 110474595
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Entry
110474595 CDS
T05897
Symbol
THRB
Name
(RefSeq) thyroid hormone receptor beta isoform X2
KO
K08362
thyroid hormone receptor beta
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04080
Neuroactive ligand-receptor interaction
lsr04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110474595 (THRB)
04081 Hormone signaling
110474595 (THRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110474595 (THRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lsr03310
]
110474595 (THRB)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110474595 (THRB)
Nuclear receptors [BR:
lsr03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
110474595 (THRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110474595
NCBI-ProteinID:
XP_021393758
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Position
2:complement(38707216..38870864)
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AA seq
476 aa
AA seq
DB search
MNYCMQEIYEVHPAAGSNCYMQSTDYCTYIEDNQGYSSCDAQVLHSNNIYMEQAWAVNQP
YTCSYPGNVFKSEYSDMDMALNQYNQPEFFTEEKPTFSQVQSPSYSQKKGYIPSYLDKDE
LCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYEGKCVIDKVTRNQCQECR
FKKCIFVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKTIGHKPEPTDEEWELIKIV
TEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSQFTKIITPAITRVVD
FAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGG
LGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLVCVERIEKCQEGFLLAFEH
YINYRKHHVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaactactgtatgcaagaaatatatgaagtgcacccagctgctggtagcaattgctac
atgcagtccactgattattgcacatatattgaagataatcagggttacagcagttgtgat
gctcaggtcctgcacagtaacaacatatatatggaacaggcctgggcggtgaatcagcct
tatacctgtagttaccctggaaacgtgtttaaaagcgagtactctgacatggacatggcc
ctgaatcagtacaaccaacctgaatttttcacagaagaaaaacctactttttctcaagtg
cagtcgccatcgtactctcagaagaaagggtacatacccagttacttagacaaggatgag
ctatgtgtagtatgcggggacaaagccaccggatatcattatcgctgcatcacttgtgaa
ggctgcaagggtttttttagaagaaccattcaaaagaacctccatccaacctattcctgt
aaatatgaaggaaaatgtgtgatagacaaagtaacaagaaatcagtgccaggaatgtcgc
ttcaaaaaatgtatctttgttggcatggcaacagatttggtgttggatgacagcaagagg
ttggcaaaacggaaactgatagaagagaatcgagagaagagacgtcgggaagagctgcag
aaaaccattgggcacaaaccagagccaacagatgaggaatgggagctcatcaaaattgtt
actgaagcacatgtggccaccaatgcacaaggaagccactggaagcagaaaaggaaattt
ctgccagaagatattgggcaggcaccaatagttaatgccccagaaggtgggaaagtggat
ttagaagccttcagccagtttacaaaaattatcacaccagcgattacaagagtggtggat
tttgccaaaaagttgcctatgttttgtgagctgccatgtgaagaccagatcatccttctg
aaaggctgctgtatggagatcatgtccctccgagcagcagttcgctatgaccccgagagt
gagactttaacactaaatggggagatggcggtgacaaggggccagctgaaaaatgggggt
cttggcgtagtttctgatgccatttttgacctgggcatgtctctttcttcatttaacctg
gatgacaccgaggttgcccttcttcaagctgttctgctcatgtcatcagatcgcccaggc
cttgtttgcgttgagagaatagaaaagtgtcaagagggtttcctcctggcattcgaacac
tacattaattacagaaaacaccatgttgcacacttttggccaaaactgctgatgaaagtg
acagacctgcgaatgattggagcctgccatgccagccgcttcctgcacatgaaggtggag
tgccccacagaactgttccctccgttattcctggaagtgtttgaggattag
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