Lonchura striata (white-rumped munia): 110474671
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Entry
110474671 CDS
T05897
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110474671 (HDAC9)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110474671 (HDAC9)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
110474671 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
110474671
NCBI-ProteinID:
XP_021393950
LinkDB
All DBs
Position
2:30348742..30808579
Genome browser
AA seq
1115 aa
AA seq
DB search
MLQTIYESESCFSSDGVSGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRM
MVPMVDPIMREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQE
LLAIKQQQELLEKEQKLEQQRQEQELERHRREQQLPPLRGKERGRERAVASTEVKQKLQE
FLLSKSATKDSPANGKNHSMSRHPKLWYTAAHHTSLDQSSPPLSGASPPYKYTLPGAQDA
KDDFPLRKTASEPNLKVRSRLKQKVTERRSSPLLRRKDGNVSSFKKRLFEVTESSVSSSS
PGSGPSSPSNGPTSSTTENETSVLPSNIQAEHLVSQQRLLIQDESVNLLSLYTSPSLPNI
TLGLPAIQPQISGVRECSRKSNSFPLLQSSSSFKEKQKGETPSLRQGVALAGQYGGSIPP
SSAHPHIALEGKPNSSHQALLQHLLLKEQMRQQKLLVTGAVPLHPQSPLAAKERVSPGIR
AAHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKMLSKSIEQL
KQPGSHLEEAEEELHGDHSMQEERAPSSSASVRAESSSAGVDERIGQQVGAVKVKEEPLD
SDEDVQTQQMESGEQAAFMQQEFLAHRHVHQLQIYQAQMATVGMAGSDKHRPLSRTPSSP
TDSTLPHPDMDQPSQHVYTTGVVYDSLMLKHQCMCGNYANHPEHAGRIQSIWSRLQETGL
LNKCERIRGRKASLEEIQLVHSEHHSLLYGTSPLNRQKLDPRKLLGNMSQKLFSLLPCGG
LGVDSDTVWNELHSAGAARMAVGCVIELAARVASRELKNGFAVVRPPGHHAEESTAMGFC
FFNSIAITAKYLRDKLNIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPG
SGAPNEVGSGPGEGYNINIAWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGF
DAVEGHDPPLGGYKVTAKCFGHLTKQLLKLADGRVVLALEGGHDLTAICDASEACINALL
GNELEPLPEDIVHQIPNMNAIASLKKTTEIQSKYWKSVEPYSVPVDCALAESQKQEREET
ETVSAMASLSVDVEQCIPQEGSRAAGEPMEEEPAL
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagacaatttacgagagtgaatcgtgtttttcctcagatggggtttctggacgt
gaacagctcttggctcagcaaagaatgcacagtatgatcagctcagtggatgtgaagtcg
gaggttcccgtgggcctggagccgatctcccccttagacttgcggacggatctcaggatg
atggttcccatggtggacccgattatgcgcgaaaagcagctccagcaggagctgctcctg
atccagcagcaacagcagattcagaaacaactgctcattgcagagttccagaagcagcat
gaaaacctgacccgccagcatcaggcccagctccaggagcacattaagttacaacaggaa
ctactagccattaaacaacagcaagaactccttgaaaaagagcagaaactggagcagcaa
agacaagagcaggaactggagaggcatcgcagggagcaacagcttcctcccctccgaggc
aaagaaagaggacgagaaagggcagtggccagtacggaagtgaagcagaaacttcaagag
ttcctgttaagtaaatcagctacaaaagactctccagcaaatgggaagaatcattccatg
agccgtcaccccaagctctggtacacggctgcccaccatacctcactggatcaaagctct
ccacccctgagtggggcctcgccaccatacaaatatactttaccaggagcacaggatgct
aaggatgattttccacttcgtaaaacggcttcagagcccaatttgaaggtacgttcaaga
ttaaaacaaaaggtgacagaaaggagaagcagtcctttacttaggaggaaggatggaaat
gtcagttcattcaagaagcgtctttttgaggtgacagaatcctcagtcagtagcagctcc
cctggatcaggtcccagttccccaagcaatggtccgaccagcagtacaacagaaaatgaa
acttcagttttgccgtctaatattcaagctgagcacctggtttcccagcaacgcctttta
atacaggatgaatcggtgaacttgttgagtctgtacacatccccttctctgcccaacatt
accttgggccttccagcaatacaacctcaaatcagtggagtcagggagtgctccaggaaa
agtaatagcttcccactgctacagtcttcgtcgtcattcaaagaaaagcagaagggggag
accccgtcgctaagacaaggagtggccttggctggacagtatggaggaagcattcctcca
tcatcagctcatcctcacattgctttggaaggaaagccaaacagcagccaccaagctctc
ttgcagcatctgttactgaaagaacaaatgagacagcaaaaacttcttgtgactggagca
gttcctcttcatccacagtctcctttagcagcaaaggagagagtctcacctggcataaga
gctgcccacaaactgcctcgtcacaggccactgaacagaacccagtcagctcctcttcct
cagagtactttggcccagctggtcatccagcagcaacatcagcaatttttggagaagcag
aagcagtaccagcagcagatccacatgaataagatgctttctaagtccattgagcagctc
aagcagcctggcagtcacctggaggaagctgaagaagaacttcatggagatcactcgatg
caggaagagcgagctccctccagcagtgccagcgttagggctgagagcagcagtgctggt
gtggatgaaagaataggacagcaggtgggggctgtgaaagtcaaagaggagccactggac
agtgatgaggatgttcaaacccagcaaatggaatctggggagcaagctgcttttatgcaa
caggagttcctggcacatcggcatgtccaccagttgcaaatctaccaggctcagatggct
acagttggcatggcaggatcagataaacatcgaccactttccaggaccccatcttccccc
actgactccacattacctcacccagacatggaccagcccagccagcatgtctacacaact
ggtgttgtgtatgacagtctgatgctgaagcaccagtgcatgtgtgggaactacgctaat
caccccgaacacgctggaagaatccaaagcatctggtcaaggctgcaagaaactgggttg
ctaaacaagtgcgagcgaattcgaggtcgaaaagccagtctggaggaaatacagctggtt
cactctgaacatcattcactgctgtatggcaccagcccactgaacagacagaagctggac
cccaggaaactcctaggaaacatgtctcaaaaactcttttccttgttgccttgtggggga
cttggggtggacagtgacaccgtttggaacgagctgcactcggccggggcggcgcgcatg
gcggtgggctgtgtcatcgagctggcggcgcgcgtggcctcccgggagctgaagaatggc
tttgctgttgtaaggcccccaggccatcacgctgaagaatcaacagccatggggttctgc
ttttttaattcgattgcaattactgccaaatacttgagagacaagctaaatataggcaag
atattgattgtagatctggatgttcaccatggcaacggtacacagcaggctttttatgct
gaccccagcatcctgtatgtttccctccatcgctatgatgaaggcaacttcttccccggc
agtggagccccaaatgaggttggaagtggccctggtgaagggtataacataaatattgct
tggacaggtggcttggatcctcctatgggtgatgttgagtatctcacagcattcagaact
gtgattatgccagctgccaatgagtttgatccagaaattgtcctggtgtcagcaggattc
gatgctgtggaaggccacgaccctccgctgggcgggtacaaagtcacagctaaatgtttt
ggtcacctaaccaagcaattgctgaagctggcggacggccgcgtggtgctggcactggag
ggaggccatgaccttactgccatctgtgacgcctctgaagcctgtataaatgccctccta
ggaaatgagctggagcctctcccggaagatattgtgcaccaaatccccaatatgaatgca
atagcttctttaaaaaagaccactgaaattcaaagcaagtactggaagtcagtggaacca
tactctgtgccagtggattgtgctctggctgagtctcagaagcaagagagggaggagaca
gaaacagtatcagctatggcctctctgtcagtggatgttgagcagtgtattcctcaggaa
ggcagcagagctgctggtgagcccatggaagaagagccagccttgtga
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integrated database retrieval system
