Lonchura striata (white-rumped munia): 110474688
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Entry
110474688 CDS
T05897
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110474688 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110474688 (SNX13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Syntaxin_2
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
110474688
NCBI-ProteinID:
XP_031359705
LinkDB
All DBs
Position
2:complement(30225843..30301128)
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AA seq
968 aa
AA seq
DB search
MLTETSLSIWGWGSLGLVLFLVTFGPFAIFYFAFYILCFVGGGFVVTLLFGKSNSEKYLE
QCEHSFLPCTSVGIPKCIEEMKREARPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTRLVDDFGTHLRVFRKAQQRIA
EKGNQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYILLPPGD
FQNKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQSGKEIDTV
KLAANFGKLCTVPLDHILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
QSRQKDGKHQTNQTKGLLRAAAFGVYEQYLSEKASPRVNIDDNLVAKLAETLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGESFNGSPT
SSINLSLDDLSNVPTDETVQLHAYISDTVYADSDPYAVAGVCNDHGKTYALYAITVHRRN
ANSEEMWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNAY
LQLLLNPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKS
IPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLMQKTYSDPDHCRVAAPIDDNVDD
NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQ
VADAVKRFRDAFWPNGILAETVPRRDKAIRMRTRVAGKTKLLEVMPDEMKHIIGAETTRK
GILRVFEMFQHSQLNKRMVYVFLERFLETLFPQNKFPELFHKLHSRSKQMQRYKQRLHST
QAPSLQKR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttaacagagaccagtctttccatatggggatggggaagccttggccttgtgcttttt
ctagtaacttttggacccttcgctatattttactttgcattttatatcctctgctttgtg
ggtgggggttttgtggttactcttttatttggaaaaagcaattcagaaaaataccttgag
cagtgtgaacattcatttctcccttgtacatcagttgggatccctaagtgcatcgaagaa
atgaaacgtgaagccagacctattaagattgacagaagactgacaggtgcaaacataatt
gatgagcctttgcaacaggtaatccaattttccctgagagactatgtacagtattggtat
tacacactaagtgatgatgaatcctttcttctggaaattagacaggctcttcagtatgca
cttgttcagttttctgccaggtcaaaggaaacagactggcagccttatttcactacacga
cttgttgatgactttggcactcatcttcgagttttcagaaaagctcagcaaaggatagca
gagaaaggcaatcaaatgaaagatcaagctgaggaacttgtagatacattctttgaggtt
gaagttgaaatggaaaaagaagtctgtcgtgatctagtctgcacttctcccaaagatgaa
gaaggattcctaagggatctgtgtgaggttttactgtatatattgctacctcctggagac
ttccagaacaagatcatgcgatactttgtcagggaaatcctctcccgaggaattcttctt
ccgttaataaaccagctcagtgatcctgattatattaatcagtatgtcatatggatgatt
cgtgattccaactgtaactatgaggcctttatgaatattattaaattaagtgataatata
ggcgagttggaagctgtgaaagataaagcaagtgaagaattgcaatatcttcgatctcta
gatacagcaggagatgatatcaacactataaaaaatcaaataaacagtttattatatgtt
attaaagtatgtgattcaagaattcagaggttgcagtcaggaaaagaaatagatactgtg
aaactggcagcaaactttggaaaactttgcacagtccctctggaccatattctggtagac
aatgttgcactacagttttttatggattacatgcagcaaactggtggccaagcacatctg
tttttctggatgacagtggaaggatacagggttacagcacagcaacaactggaggtactt
caaagccgacagaaagatggaaaacatcagactaatcagaccaagggtctattaagagca
gctgcatttggagtttatgagcaatatttatcagaaaaggcatctccaagagttaatatt
gatgacaacttagtagcaaaacttgcagaaacactgaaccatgaggatccaacgcctgaa
atctttgatgacattcagagaaaggtgtatgagttgatgctgcgagacgagaggttctac
ccttcgttcaagcagaacgtgttgtatgtgcgtatgttagctgagctggatatgctgaag
gatcccagtttcagaggatcagatgatggtgaaggagagtcttttaatgggtctcctact
agcagcataaatttgtccttagatgacctttcaaatgtccctactgatgagacagttcag
ctccatgcatacatctcagacactgtctatgctgactctgacccatatgctgtggcagga
gtgtgtaatgaccacggcaagacatatgccctgtacgccatcactgtccacaggcgaaat
gcaaacagtgaggagatgtggaagacataccggcgctacagcgacttccatgactttcac
atgaggatcactgagcagtttgaaaaccttgcaaatatactaaaacttcctggcaaaaaa
acatttaacaatatggacagagagtttctggagaagaggaaaaaggatttaaatgcttat
ttacagctcttgttaaatcctgagatgatgaaagcttctccagctttagcccattatgtg
tatgacttcctggagaataaagcctatagcaaagggaagggggattttgcacgaaagatg
gacacgtttgtaaatccactgcgtaactctatgagaaatgtatcaaatgcagtcaagtct
atccctgacagcctggcagagggaatgactaaaatgtcagacaacatgggtaaaatgtca
gagagattgggacaagacataaagcaatcatttttcaaggtgccacctctgatgcagaaa
acctattcagatcctgaccattgccgtgttgcagcaccaattgatgacaatgtggatgac
aatataccactgagagtaatgctgctacttatggatgaagtctttgatttgaaggagaga
aatcagtggttaagaagaaatataaaaaatctgcttcagcaacttattagagcaacatat
ggtgacacaattaatagaaaaatagttgatcatgttgattggatgacatctcccgagcaa
gtagcagatgcagtgaaacgcttcagagacgctttttggcccaatggcattttagcagaa
actgttccacggagggacaaagctattagaatgagaacaagagtggcagggaaaaccaaa
ttgctggaggtaatgccagatgaaatgaagcacatcataggtgctgagactacacggaaa
ggcattcttcgggtcttcgaaatgttccagcatagtcagctgaataagagaatggtgtat
gtgtttctggagagattcctagaaaccttatttccacaaaataagttccctgagttgttc
cacaaactgcattcaaggtcaaagcaaatgcagagatataagcagagactacactctact
caagcgccttccttacagaaaaggtga
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