Lonchura striata (white-rumped munia): 110474823
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Entry
110474823 CDS
T05897
Symbol
CCDC47
Name
(RefSeq) PAT complex subunit CCDC47 isoform X1
KO
K24962
PAT complex subunit CCDC47
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsr03110
]
110474823 (CCDC47)
04131 Membrane trafficking [BR:
lsr04131
]
110474823 (CCDC47)
Chaperones and folding catalysts [BR:
lsr03110
]
Other chaperones and cochaperones
Others
110474823 (CCDC47)
Membrane trafficking [BR:
lsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
110474823 (CCDC47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC47
Motif
Other DBs
NCBI-GeneID:
110474823
NCBI-ProteinID:
XP_021394220
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All DBs
Position
27:1651378..1661824
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AA seq
491 aa
AA seq
DB search
MNRFLLEVKMKNLYIFIAVLFIPWSFSLAKYDEFEDGDDIMEYDDNDFAEFEDVSEDTVT
ESPQRIITTEDDEEEATVELEGQDENQEDFDDADRQEGDTESEPYDDEEFEGYEEKPDAS
HSKNKDPITIVNVPAHLQNSWESYYMEILMVTGLLAYIMNYIIGKNKNNRLAHAWFNTHR
ELLESNFALVGDDGTNKEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLN
VLARMMRPASDQVQIKVTMNDEDMDTYVFAVGTRKALVRLQKEMQDLSEFCSDKPKSGAK
YGLPDSLAILSEMGEVTEGMMDAKMIHFLTHYADKIDSVQFSDQFSGPKLMQEEGQLTKL
PETKKTLLFTFNVPGSGNTSPKDMESLLPLMSMVIYSIDKAKKFRLNREGKQKADKNRAR
VEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQKKLEKKQ
MKMKQIKVKAM
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggttcctcttggaagtgaaaatgaagaatttatatatttttatcgctgtcctg
ttcatcccatggagcttttctttggcaaagtatgatgaatttgaggatggagatgacatt
atggaatatgatgataatgactttgctgaatttgaagatgtgagtgaagatacagtcaca
gagtctcctcaaaggatcatcactacagaagatgatgaagaagaagccactgtagagctt
gaaggtcaggatgaaaatcaggaagactttgatgatgcggacagacaggaaggtgacacc
gagagtgagccgtatgatgatgaggagtttgaagggtatgaagagaaaccagatgcatct
catagcaaaaataaagaccccataacaatagttaatgtccctgctcaccttcaaaacagc
tgggagagttattacatggagatcctgatggtaacaggcctcctggcttacatcatgaac
tacatcatcgggaagaacaaaaacaaccgcctggctcatgcttggttcaacacccacagg
gagctgctagaaagtaactttgctcttgttggggatgatggcactaataaagaagctaca
agcactgggaaactaaatcaagaaaatgaacacatatataacttgtggtgctctggaagg
gtgtgctgtgaaggaatgctcatccagttaaagtttctcaagagacaggacctgctgaat
gtcctggcacgcatgatgaggccggcgtcagatcaagtgcaaataaaagtgacaatgaat
gatgaagatatggacacatatgtgtttgctgttggaaccagaaaagcactggtgagactt
cagaaagagatgcaggacctgagcgagttctgcagtgataaaccgaagtctggtgcaaaa
tatgggcttccagattcgctggctatcttgtcagagatgggagaggtcacagagggaatg
atggacgctaagatgatccatttcctcacacactatgctgacaagattgactctgtccaa
ttctcggaccagttctccggtccaaaacttatgcaagaggagggccagcttacaaaactg
cccgaaactaaaaagacacttttgtttacatttaatgtgcctggttcaggcaacacttcc
ccaaaggacatggagtctttgctgcctctgatgagcatggttatctactccattgacaaa
gcaaagaagttccggctgaacagagaaggtaaacaaaaagctgacaagaacagggctcgg
gtggaagagaacttcctcaagctgactcacgtgcagagacaggaggctgcccagtcccgc
cgggaggagaagaaacgggcggagaaggagcgaatcatgaacgaggaggatcccgagaaa
cagcgtcggctggaggaagctgctctgcgccgtgagcagaagaagctcgagaagaagcag
atgaagatgaagcaaatcaaagtgaaagccatgtga
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