Lonchura striata (white-rumped munia): 110474849
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Entry
110474849 CDS
T05897
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03013
Nucleocytoplasmic transport
lsr03015
mRNA surveillance pathway
lsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110474849 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
110474849 (EIF4A3)
03015 mRNA surveillance pathway
110474849 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110474849 (EIF4A3)
03041 Spliceosome [BR:
lsr03041
]
110474849 (EIF4A3)
03009 Ribosome biogenesis [BR:
lsr03009
]
110474849 (EIF4A3)
03012 Translation factors [BR:
lsr03012
]
110474849 (EIF4A3)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110474849 (EIF4A3)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110474849 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
110474849 (EIF4A3)
Spliceosome [BR:
lsr03041
]
Complex C
Other components
EJC/TREX
110474849 (EIF4A3)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
90S particles
Helicases
110474849 (EIF4A3)
Translation factors [BR:
lsr03012
]
Eukaryotic type
Initiation factors
eIF-4
110474849 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
110474849
NCBI-ProteinID:
XP_021394283
UniProt:
A0A218UH52
LinkDB
All DBs
Position
3:complement(302223..308817)
Genome browser
AA seq
410 aa
AA seq
DB search
MAGSAGSAGGSARKRLMKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKP
SAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQ
IQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAI
KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV
KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN
FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY
IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtccgcggggtccgcgggcggctcggcgcggaagcgcctcatgaaggaggag
gacatgaccaaggtggagttcgagaccagcgaggaggtggacgtgacgcccaccttcgac
accatgggcctgcgggaggacctgctgcgcggcatctacgcctacgggttcgagaagccg
tcggccatccagcagcgagccatcaagcagatcatcaagggcagggacgtgatcgcccag
tcacagtcgggaacagggaagacagcaacattctccatatctgttctgcagtgcctggat
atacaggttcgtgagacccaagccttgatcctggcaccaactcgggagctggctgtgcag
atccagaagggccttctcgccctgggagactacatgaacgtgcagtgccacgcctgcatc
gggggcaccaacgtgggcgaggatatccgcaagctggactacgggcagcacgtggtggct
ggcactccaggccgggtgttcgatatgattcgtcgcagaagtctaagaactcgtgccatc
aaaatgctggttttggatgaggcagatgaaatgctcaataaaggcttcaaggagcagatt
tatgatgtgtacagatacctgcctccagccacacaggtggttctgatcagcgccactttg
ccacatgaaatcttggaaatgaccaacaaattcatgacagaccccatccgcatcctggtg
aaacgtgatgagttgaccctcgaaggaatcaagcagttttttgtggctgtggagagagag
gagtggaagtttgacaccctgtgtgatctctacgacacgctgaccatcacccaggctgtc
atcttttgtaacaccaagagaaaggtcgactggctcacagagaagatgagggaagccaac
ttcacagtttcctccatgcatggggacatgccccaaaaggagagagagtccatcatgaaa
gagttcagatctggcgcaagccgagttcttatttccacagacgtttgggctcggggcctg
gatgtgcctcaggtgtcgctgatcattaactacgacctgcccaacaacagagagctctac
atacacagaatcggccgctcgggcaggtacggccggaaaggcgtcgccatcaactttgtg
aagaacgacgacatccgcatcctgcgggacatcgagcagtactactccacccagatcgat
gagatgcccatgaacgttgctgatcttatctga
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