Lonchura striata (white-rumped munia): 110475112 Help Entry 110475112         CDS       T05897                                  Symbol SMARCC1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism lsr  Lonchura striata (white-rumped munia) Pathway lsr03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:lsr00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     110475112 (SMARCC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lsr03021]     110475112 (SMARCC1)    03036 Chromosome and associated proteins [BR:lsr03036]     110475112 (SMARCC1) Transcription machinery [BR:lsr03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      110475112 (SMARCC1) Chromosome and associated proteins [BR:lsr03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     110475112 (SMARCC1)    PBAF complex     110475112 (SMARCC1)    GBAF(ncBAF) complex     110475112 (SMARCC1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SWIRM-assoc_3 SWIRM-assoc_1 SWIRM SWIRM-assoc_2 Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 Chromo BRCT DUF919 BRCT_2 SpeFL Motif Other DBs NCBI-GeneID:  110475112 NCBI-ProteinID:  XP_031360005 LinkDB All DBs Position 2:3400243..3458615 Genome browser AA seq 1003 aa AA seqDB search MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT IYLIPDMELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV LVHWGFFPDSYDTWVHANEIDAEIEDAPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE QDEETVATGGKEDEDPNKGDQSRSVDAGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQIPAAQQMLSFPEKNK EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPEEP EKMDGAEEEKMETEAEGQPAEKVESKAESEPEEGEKVLEGESERNAEKEPEGEGAAEPKT EEKEAEENKENVDGSKDKEAEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEER KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYA ELRARQQMEQQHSQNPQQPHQHPSGPGINPLGAPAHPGLLPHQQPPPYPMMHHQMPPPHP PQPGKRRAGSSCPEPRGGGAARGGCPRGPGWLLVYWLLVYSGATGRVCWKDELCTFCSLT VELPPPFQMCAGGQVLTSAAAEGAPLGSADREQNAASPSSSDG NT seq 3012 nt NT seq  +upstreamnt  +downstreamnt atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag aatgaacagggctggaggaggtttgacctgcagaatccctcccggatggatcggaacgtg gagatgttcatgaacattgagaaaacgctggtgcagaacaactgtctgagcagaccaacc atctacctcatccctgacatggagctgaagctggccaacaagctgaaggacattgtcaaa cgtcaccagggaacagtcactgaagagaaatccaaggctacccaccacgtgtatccaagt cctacctcaatggatgatgatgagtggttgagacctgtgatgaaaaaggacaagcaggtg ctggtacattggggcttttttccagacagctacgacacctgggtccacgccaacgaaatc gatgcagaaattgaggacgccccgatccctgagaagccctggaaggttcatgccaagtgg attctggacacggatgtgttcaatgagtggatgaatgaggaggattatgaggtggatgag aacaggaaatccgtgagctttcgccagaggatctccatgaagaatgaggagcccgtgcgg agccctgagaggagggacaggaaagcagcagccagcacaaggaaaaggaaacattcccct tctccaccccccactcctgtggagtccaggaaaaagacagggaagaaaggccaagctgct ctctatggcaaaaggaggggacagaaggaggaggatgagcaggaggatctcaccaaggac atggaggatcccaccccagtacccaacatagaagaagtggtacttcccaaaaatgtgaac ccaaagaaggacagtgagaacacgcccgtgaaaggaggaaccgtggcagacctggatgag caggatgaggagacagtggcgactggaggaaaggaggacgaggaccccaacaagggcgac cagagccgctccgtggacgcgggggaggacaacgtcaccgagcagaccaaccacatcatc atccccagctacgcctcctggttcgactacaactgcatccacgtgattgaacgtcgtgca cttccagaattcttcaatgggaaaaacaagtccaagactccagaaatatacctggcctac aggaacttcatgatcgacacgtaccggctgaacccgcaggagtacctgaccagcacagcc tgcaggaggaacctcaccggggacgtctgcgccgtcatgagggtccatgccttcctggag cagtgggggctcatcaactaccaggtggatcccgagagccgccccatggccatggggccc cccccgaccccccacttcaacgtgctggccgacaccccctcggggctgatgcccctgcac atccgcacgccccagattccagctgcccagcaaatgctgagcttccctgagaagaacaag gagaagccaactgacctgcagaactttggtcttcgcacagacatctactccaaaaagact ctggccaagagtaaaggtgcaagtgctggcagagaatggacagagcaggagacactgctg ctgttagaggcgctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggc agccgcacgcaggacgagtgcatcctgcacttcctgcgcctgcccatcgaggatccctac ctggagaactcggacgcctcgctggggcccctggcctaccagcccgtgcccttcagccag tcgggcaaccccgtcatgagcaccgtggccttcctggcctccgtggtggatccgcgcgtg gcctcggccgccgccaaggccgccctcgaggagttttcccgggtcagagaggaggtgccc ctggagctggtggaagcccacgtgaagaaggtgcaggaagctgctcgagcctctgggaag gtggatcccacctacggcctggagagcagctgcatcgctggcacgggccccgaggagccc gagaagatggatggagctgaggaagagaagatggaaacagaggcagaggggcagccagca gagaaggtggagagcaaagctgagagtgagcccgaggagggggagaaggtcctggaaggg gagagcgagcggaacgcagagaaggagcccgagggcgaaggggctgcggagcccaagaca gaggagaaggaggcagaggagaacaaggagaacgttgacggcagcaaggacaaggaggcc gaggctgggaagaagaaagtggagcacgagatctcggaggggaacgtggccacagctgca gctgctgccctggcctctgctgccaccaaagccaagcacttggcagctgtggaggagagg aagatcaagtccctggtggcccttctggtggagactcagatgaagaagctggagataaaa cttcgccactttgaggagctggaaaccatcatggaccgggagaaagaggcactggagcag cagaggcagcagctgctgacggagaggcagaacttccacatggagcagctgaagtacgcc gagttaagggctcgccagcaaatggagcagcagcacagccagaacccccagcagccccac cagcaccccagcgggcctggcatcaaccccctgggggcaccagcacacccagggctgctg ccccaccagcagcccccgccctaccccatgatgcaccaccagatgccacctcctcaccca cctcagccaggtaagagaagagctgggagctcctgccctgagccccgagggggaggagct gccaggggaggctgcccaaggggccctgggtggttactggtttactggttactggtttat agtggtgccactggcagggtttgctggaaagatgagctttgcaccttctgcagcctcact gtggagcttccacccccgttccagatgtgcgcaggaggacaggttctgacctcagcagca gctgaaggtgcccccctgggctcagcagaccgtgagcagaacgcggcgtcgccatcctcg agtgatggatga

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