Lonchura striata (white-rumped munia): 110475116 Help Entry 110475116         CDS       T05897                                  Name (RefSeq) SCO-spondin   KO K24434   SCO-spondin Organism lsr  Lonchura striata (white-rumped munia) Brite KEGG Orthology (KO) [BR:lsr00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:lsr04990]     110475116 Domain-containing proteins not elsewhere classified [BR:lsr04990]  Thrombospondin domain-containing proteins   Other thrombospondin domain-containing proteins    110475116 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ldl_recept_a TSP_1 VWD TSP1_spondin TIL VWC VWF Motif Other DBs NCBI-GeneID:  110475116 NCBI-ProteinID:  XP_031360008 LinkDB All DBs Position 2:complement(3649859..3701631) Genome browser AA seq 2913 aa AA seqDB search MDGGCQVGAGMELGLCQVRADPGRIPADPGRIPGRSRADPGQIPADPHGSRGSRADPGRI PADPSGSRADPGRIPADPRGSRVDPGQIPADPRGCRGSRADPGWIPGGSRADPGGSPRIP GGSRADPGRIPGGSRADPGQIPRIPADALAARRRWCERTVPVLEQEEPPAACQAWAGTRF RTFDGRHFGFAGSCRYRLAAATDGTWGVTVAPGASPLPQELHMSFGTDTVVAEGRNVSVN GAAVPEGRPYLHKGLGVTWPGDWVAVASSLGVRVAWDGHLAVTVTAEPELRGATWGLCGT YTDDPADDFVLPDGDIAAVAAAFGNAWKVPAAGTEVPEGPGWHLVPVWGSPGVAPALRDP RLSPRAGTCRRLAPGVARLSWHRRWPRDLVAGRLLITAEQEPCDSHGPHGCPRSLTVTTN RTTARLHGTGEVTVAGREVTLPFSGAELSIRRASSTFLHLQLPDAHLLWGLGTPDTFITL QPAMAGTDGRCVPPAECPCHHGGQLYPPNATIARDCNTCVCRGQRWHCGREECAGTCVAT GDPHYVTFDGRAFTFAGDCEYLLAREATGLFAVTAENVPCGASGVTCTKSVVVAMGNTVV HMLRGREVTVNGVAVRPPKVFGGSGLALQRAGLFLLLLTHGLCVEPPACPCFWDGFAFPA GATVTQGCSNCTCLEGRWQCPPSPSPCPAAPGCAPWEFRCRAGGLCVPGAWLCDNEDDCG DGSDELCDPPCAPQQPRCPGGRCLPWGARCDGVTHCPDGWDEAGCPGPACAPPDFSCAGG RCLPPARVCDGRLDCPPGDDSDEAGCAPRCGPGQFRCGGGRCVPYGHRCDGRDDCGDGSD ESGCACPEGHLPCPGGGCQPPAALCDGRRHCPDGADEANCPARATCAPGTVPCPDGSCVP EAAVCDGARDCAVTGSSIGAVASTVTVSDTDAVADTVLDTATVTVPVTDTVPIPDTIPAT DTVPDTEIVPATDTVPDTATVTVPDTVPDTDTVPDTDTVPDTEIVPVTATATVTVTVPDT VSDTDTVPDTFTVTVPDTDTVPDTVPDTVTVTVPDTVPVTADGPAAPCPPRSLRCRSGGC VPRGWRCDGDSDCPDGSDEGGCAPPCAPGHLPCAPPCAPGHLPCAPACVPPPRLCDGVPD CRDGADESPQLCEPPGPGSSPRGPCAEFDCGDGECVTFHQVCDGLRDCASAGDERGCGLW GPWGPWGSCSRPCGPGGQRRARGCHQRQPGLLRGCRGPRQQERPCFHRACPGALNSPPAV DGAWGPWGPWSDCPGGCGGLRLRRRGCQPPQNGGRACEELRGGSPGALEMAPCAPGGCPN ASECAEGLRPLPCAPCPASCADLAAAVPCPRPPPCRPGCWCPAGQVLDAPEAGAGPARCV RPPQCPCGAGGRRYPPGAPVPLGCRLCSCLEGRLRHCRPHAGCSVDCGWSSWSPWGSCAG GCGTPGVQWSFRSPSDPARRGAGRPCRGIYRKARRCRAAPCRRCRERGRWRGAGERWRGG PCRVCQCLPGGTVRCVPYCPPRRPGCPRGRGLREGDGGSCCACGPAGCRCRPGLVLQGSG CIEPGYPKTPPYPNPITPTPLNPESHPYRETCCTPNPSVSHQPRGRGGRRPLHRDPPRGP GLCRTLRTRYVPGPPEPPGPELGPPSATGTREPRVPLSPEPGSAGPPGATEEPPPPGSPR PPGGTETPEPPGVPVSPWGSELPWVPVSPRGSEPARGRWSPWGPWGGCSAPCGGGERWRR RGCGTPPCPGPALQSQSCHSHACRDAGCPPGRTFRECGGDSGCPRSCAHLGGAVGCAGGC QEGCQCPPGTLLHRRACLQRSPALQRNPAPQQNPALYGNPAPQQNPALQRNPAPQRNPAP YGNLVLYRSLAPEQNPALYGNPAPQQNLALQQNPDPYGNPAPYGNPAPQRNPALYRNPAP QRNPAPYGNPALQQNPDPYGNPAPYGNPAPQRNPALYGNPAPQRNPAPYGSPAPQRSPAL YGNPAPYGNLALQWNPAPYGNLVLYRSLAPEQNPAPYGNPALQRNPALYRNPAPQRSPAP YGSPAPQQNPAPQQNPALYGNPALYGNPALQQNPDPQWNPALYGNPAPYGNPALQQNPAP QQNPALYGNPAPQWNPAPYGNPALQWNPALYGNPAPYGNPLSGGHRCPPAVHGAWSPWGP WSRCDVSCGGGRSVRSRSCSRPPPKNGGSPCPGPGHELRVCNPRPCGPRCPPGQTVSPCA SRCPRSCRDLQEGVSCAGGAPCEPGCRCPPGTLEQDGGCVPPALCGCLDARGHLWVPGGG GHPRGCRNCTCAGGRLRCVPGGCPPTGTPPGTPPGTPPCAWSRWSRWGPCSVTCGGGRQE RYRTPIPAEAVGGACGAPQEQARRCEETPCPPLCPWAGGERALGERWSPGPCRQCTCTPE GPECWDTPCAAEPCDWSPWGPWGPCGDPCAGGSRLRHRHPLSPESAGRACAGVRTQSESC ASSACPDPGCGGGGRARSPCAGRCPRTCADTWAPVLCLQGPCEPGCRCPPGQLLQDGRCV PVSRCRCGTPGGDPGSREVSPGTLTRVGCHNWWVTPRRGHGWDTWGTRWHPRCSTCENGT LTCPALACPSPGPWSPWSRCSRSCGGGTRRRQRQCREGPGAGPPCRESPAEETAACNPQA CPAGFPVAPSCPPGEVWLDPGPACERSCQDLAEPPGICGGTPATLGTSASSASPATPVTP DSSSPPGIPAAPTTLGTPATLGTPSPPPRCACAPGRYRNGSGQCVSAGGCGCRHRGAPRA AGSEWQEPCGTCRCSEGRVTCATSCPALTCPEGAEPVREPGSCCPVCRDEWPEEPPGPCR LLTALRTIAKGACVLRGVRVSYCAGACRSRTAVSAQEPYVRSLCECCSYRLDPARPVRAL LLPCPRGRARPALLPRIAECRCERCRGGDFSRR NT seq 8742 nt NT seq  +upstreamnt  +downstreamnt atggacggggggtgccaggtgggagctgggatggagctgggattgtgccaggtgcgggca gatcccgggcggatccctgcggatcccgggcggatcccgggcagatcccgggcggatcct gggcagatcccggctgatccccatggatcccgcggatcccgggcggatcccgggcggatc cccgcagatcccagtggatcccgggcggatcccgggcggatccccgcagatccccgtgga tcccgggtggatcctgggcagatcccggctgatccccgcggatgccgcggatcccgggca gatcccgggtggatcccaggcggatcccgggcggatcccggcggatctccgcggatcccg ggcggatcccgggcggatcccgggcggatcccgggcggatcccgggcggatcccgggcag atcccgcggatccccgcggatgccctggctgcccgcaggcgctggtgcgagcggacggtg ccggtgctggagcaggaggagcccccggccgcgtgccaggcctgggccgggacgcgcttc cgcaccttcgacgggcggcacttcggcttcgccgggagctgccggtaccgcctggccgcc gccaccgacggcacctggggcgtcaccgtcgcgcccggtgcctcccctctgccacaggag ctgcacatgagcttcgggacggacacggtggtggccgagggacggaacgtgtcggtgaac ggcgcggcggtgccggagggacgcccctacctgcacaaagggctcggggtcacctggccg ggtgactgggtggccgtggccagcagcctgggcgtgcgggtggcctgggacgggcacctg gcggtgacggtgacggcggagcccgaactgcgcggtgccacctgggggctctgcggcacc tacaccgacgaccctgcggacgacttcgtgctccccgacggggacatcgccgccgtcgcc gccgccttcggcaacgcctggaaggtgccggcggctggcacagaggtacctgaggggccg gggtggcacctcgtgcccgtctgggggtccccgggggtcgcccccgcgctgagggacccc cgcctcagcccccgtgcagggacgtgccggaggctggcaccaggtgtggcccggctgagc tggcaccggcggtggccacgtgacttggtggcggggcgcctgctgatcacagccgagcag gagccgtgtgacagtcacgggccccacggctgtccccgcagcctcactgtcaccaccaac cgcaccacggcccggctccacggcacaggggaggtgacagtggccgggcgggaggtgacg ctgcccttctccggggccgagctgagcatccgccgcgcgtcctcgaccttcctgcacctg cagctgcccgacgcccacctgctctggggcctggggacccccgacaccttcatcaccctc cagcccgccatggccggcacggacgggcgctgcgtgcccccggccgagtgtccctgtcac cacggcgggcagctgtacccgcccaacgccaccatcgcccgcgactgcaacacctgcgtg tgccggggacagcggtggcactgcgggcgcgaggagtgcgcggggacctgcgtggccacg ggggacccccactatgtcaccttcgacggccgcgccttcaccttcgcgggggactgcgag tacctgctggcccgcgaggccaccgggctcttcgctgtcaccgccgagaacgtcccctgc ggtgccagcggcgtcacctgcaccaagtccgtggtggtggccatgggcaacaccgtggtg cacatgctgcgggggcgagaggtgacagtgaacggggtggccgtgcgaccccccaaggtg ttcggggggtcggggctggcgctgcagcgcgcggggctcttcctgctgctcctgacccac gggctgtgcgtggagccccccgcctgcccctgcttttgggacggcttcgccttcccggcc ggcgccaccgtgacccagggctgcagcaactgcacgtgcctcgaggggcgctggcagtgc cccccgagcccgtccccgtgtcccgccgcccccggctgcgccccgtgggagttccggtgc cgggccgggggtctctgcgtgcccggggcctggctctgcgacaacgaggacgactgcggg gacggctcggacgagctgtgcgaccccccctgcgccccccagcagccgcgctgccccggc gggcgctgcctgccctggggggcgcgctgcgacggcgtcacccactgccccgacggctgg gacgaggcggggtgcccgggcccggcctgcgcgccccccgacttctcctgtgccgggggg cgctgcctgccccccgcgcgcgtctgcgacgggcgcctcgattgtccccccggggacgac tcggacgaggcgggctgcgccccccggtgcgggccggggcagttcaggtgcggggggggc aggtgtgtcccctacggccaccgctgcgacggccgcgacgactgcggggacgggagcgac gagagcggctgcgcctgccccgaggggcacctgccgtgccccggcggcggctgccagccc cccgccgcgctctgcgacggccgccgccactgccccgacggcgccgacgaggccaactgc cccgcgcgggccacctgcgcccccgggaccgtgccctgccccgacggctcctgcgtgccc gaggccgccgtgtgcgacggcgcccgcgactgcgcggtcaccggcagctccatcggcgct gtcgcgagcactgtcactgtcagtgacactgacgctgtcgccgacaccgtcctcgacacc gctactgtcaccgtccccgtcaccgacactgtccccatccccgacaccatccccgccacc gacaccgtccccgacaccgaaatcgtccccgccaccgacaccgtccccgacaccgctact gtcactgtccccgacaccgtccccgacaccgacaccgtccccgacaccgacaccgtcccc gacaccgaaatcgtccccgtcaccgccaccgccaccgttactgtcactgtccccgacacc gtctctgacaccgacaccgtccccgacacctttactgtcactgtccccgacaccgacacc gtccccgacaccgtccccgacaccgttactgtcactgtccccgacaccgtccccgtcacc gccgacggcccggccgcgccctgcccgccccggtccctgcgctgccgcagcggcggctgc gtcccgcgggggtggcgctgcgatggcgacagcgactgtcccgacggcagcgacgaggga ggctgcgcccccccgtgcgcccccggccacctgccctgcgcccccccgtgcgcccccggc cacctgccctgcgcccccgcctgcgtgccccctccccgcctctgcgacggcgtccccgac tgtcgcgacggcgccgacgagagcccccagctctgcgagccccccggccccggcagcagc ccgcggggtccctgcgcagagttcgactgcggggacggggagtgtgtcaccttccatcag gtgtgtgacgggctgcgggactgcgcctcggcgggggacgagcggggctgcggcctctgg gggccctgggggccctgggggtcctgcagccgcccctgcgggcccggggggcagcgccgc gcccggggatgtcaccagcgccagcccggcctgctgcggggctgccgggggccgcgccag caggagagaccctgcttccaccgggcctgccccggcgcccttaactcgccccccgcagtg gacggcgcgtggggcccgtggggaccctggtccgactgcccggggggctgcggggggctc cggctgcgcaggagggggtgccagcccccccagaacggcggccgcgcctgcgaggagctg cgcggggggagccccggagccctggagatggccccctgtgccccggggggctgccccaac gcctcggagtgcgcggaggggctgcgccccctcccctgcgccccctgccccgcctcctgc gccgacctggcggccgccgtgccctgcccgcgacccccgccctgccgcccagggtgctgg tgcccggcggggcaggtgctggacgcccccgaggcgggcgcggggccggcgcggtgcgtg cggccgccgcagtgcccgtgcggggccgggggccgccggtacccgccgggcgccccggtg ccgctcggttgccgcctctgctcgtgcctcgaggggcggctgcggcactgccgcccccac gccggctgctcagtggactgcgggtggtcgtcgtggtcgccgtggggctcgtgcgcgggc ggctgcgggacccccggcgtgcagtggtccttccgcagcccctccgacccggcgcggcgc ggcgcggggcggccctgccgcggcatctaccgcaaggcccggcggtgccgcgcggcgccg tgccgccgctgccgggagcgcggccgctggcgcggggccggcgagcgctggcgcgggggc ccgtgccgggtgtgccagtgcctgcccggtggcaccgtccgctgcgtcccctactgtccc ccgcgccgccccggctgtccccggggccgggggctgcgggaaggtgacggcggctcctgc tgcgcctgcggccccgcgggctgccggtgccggcccgggctggtcctgcaggggagcggc tgcatcgagcccgggtaccccaaaaccccaccgtaccccaaccccataaccccgacacct ctgaaccccgaatcccacccgtaccgtgaaacctgctgcaccccaaacccatcggtctcc caccaaccccgcggtcgcggagggcggcgccccctgcaccgggaccccccgagaggtccg gggctgtgccgaactctgcggacccggtacgtgccaggaccccccgagcccccgggcccg gagctgggacccccgagtgccaccgggacccgcgagcctcgcgtccctctgtccccagag cccggcagcgcggggccgcccggggccaccgaggagcccccgcccccggggtccccgcgg ccgccggggggcacggagacccccgagcccccgggggtgccggtgtcaccgtggggctcg gagctcccgtgggtgccggtgtcaccgcggggctcggagcccgcccggggccggtggtcg ccgtgggggccctggggcggctgcagcgctccgtgcggggggggcgagcgctggcgccgc cggggctgcgggacccccccgtgcccgggcccggccctgcagagccagagctgccacagc cacgcgtgccgcgacgccggctgccccccgggccgcaccttccgggagtgcgggggggac tcggggtgcccccggagctgcgcccacctggggggcgccgtggggtgcgcgggggggtgc caggaggggtgccagtgtccccccggcaccctcctgcaccgccgcgcctgcctgcagcgg agcccggccctacagcggaacccggccccacagcagaacccggccctatatgggaacccg gccccacagcagaacccggccctacagcggaacccggccccacagcggaacccggcccca tatgggaacctagtcctatatcggagcctggccccagagcagaacccggccctatatggg aacccagccccacagcagaacctggccctacagcagaacccggacccatatgggaacccg gccccatatgggaacccggccccacagcggaacccggccctatatcggaacccggcccca cagcggaacccggccccatatgggaacccggccctacagcagaacccggacccatatggg aacccggccccatatgggaacccggccccacagcggaacccggccctatatgggaacccg gccccacagcggaacccggccccatatgggagcccggccccacagcggagcccagcccta tatgggaacccggccccatatgggaacctggccctacagtggaacccggccccatatggg aacctagtcctatatcggagcctggccccagagcagaacccggccccatatgggaacccg gccctacagcggaacccggccctatatcggaacccggccccacagcggagcccggcccca tatgggagcccggccccacagcagaacccggctccacagcagaacccggccctatatggg aacccggccctatatgggaacccggccctacagcagaacccggacccacagtggaacccg gccctatatgggaacccggccccatatgggaacccggccctacagcagaacccggcccca cagcagaacccggccctatatgggaacccggccccgcagtggaacccggccccatatggg aacccggccctacagtggaacccggccctatatgggaacccggccccatatgggaacccg ctttccgggggtcaccgctgtccccccgcagttcacggcgcgtggtccccgtggggtccc tggtcgcgctgcgacgtctcgtgcggggggggccgctccgtgcgcagccgctcctgctcc cggccccccccaaaaaacgggggcagcccctgccccgggccggggcacgagctgcgggtc tgcaacccccggccctgcggcccgcggtgcccgcccgggcagacggtgtccccgtgtgcc agccggtgcccgcggagctgccgggacctgcaggagggggtgtcctgcgcggggggcgcg ccctgcgagcccggctgccgctgcccgcccgggaccctggagcaggacgggggctgcgtg ccccccgcgctctgcgggtgcctggacgcgcgggggcacctctgggtgccggggggcggc ggccacccccgcggctgccggaactgcacctgcgcgggggggcggctgcgctgcgtcccg gggggctgcccccccaccgggaccccccccgggaccccccccgggaccccgccctgcgcc tggagccgctggagccgctggggaccctgcagcgtcacctgcgggggggggcggcaggag cgctacaggacccccatccccgccgaggccgtggggggagcctgcggggccccccaggag caggctcggcgctgcgaggagacgccgtgcccgcccctgtgcccctgggcggggggcgag cgggcgctgggcgagcgctggagccccgggccctgccggcagtgcacctgcacccccgag ggacccgagtgctgggacaccccgtgtgcggccgagccgtgtgactggagcccctggggg ccctggggaccctgcggagacccctgtgcgggggggtcccgcctgcgccaccggcacccc ctgagccccgagagcgccgggcgggcgtgcgcgggggtccgcacgcagagcgagagctgc gcgtccagcgcctgccccgaccccggctgcggcggcgggggccgggcccgcagcccgtgc gccgggcgctgcccccgcacctgcgcggacacctgggcgccggtgctgtgtctgcaggga ccctgcgagccagggtgccgctgcccccccgggcagctgctgcaggacgggcgctgcgtc cccgtgagccgctgccgctgcgggacccccggcggggaccccgggagccgcgaggtgtcc ccggggaccctgacccgggtcgggtgtcacaactggtgggtgacgccgcggagggggcac ggctgggacacgtgggggacacgatggcacccccggtgcagcacctgcgagaacgggacc ctgacgtgcccagcgctggcgtgtccctcgccgggcccgtggtccccctggtcccgctgc tcccgcagctgcggcggcggcacccggcggcggcagcggcagtgccgggagggccccggg gcggggccgccgtgccgggagagccccgcggaggagacggcggcgtgtaacccccaggcg tgccccgcgggattcccggtggccccgagctgccccccgggcgaggtttggctggacccc ggccccgcctgcgagcgcagctgccaggacctggcggagccccccgggatttgcgggggg acccccgcgaccctcggaacctccgcatcctccgcgagccccgcgacccccgtaactccg gacagctccagcccccccgggatccccgcggcccccacgaccctcggcacccccgcgacc ctcgggaccccctcgccgcccccgcgctgcgcctgcgccccggggcggtaccggaacggc tccgggcagtgcgtgagcgcggggggctgcggctgccggcaccgcggggcgccgcgagcg gccggcagcgagtggcaggagccgtgcgggacctgtcgctgctccgagggacgcgtcacc tgcgccacctcctgccccgcactcacctgcccggagggcgcggagccggtgcgggagccc gggagctgctgccccgtgtgccgggacgagtggccagaggagccccccgggccgtgccgg ctcctcacggcgctgcggaccatcgccaagggcgcgtgtgtgctgcggggcgtgcgcgtc tcctactgcgcgggggcgtgccgctcccgcaccgccgtcagcgcgcaggagccctacgtg cggtcgctgtgcgagtgctgcagttaccggctggaccccgcgcggcccgtgcgggccctg ctgctgccgtgcccccgcggccgcgcccggcccgcgctgctgccccgcatcgccgagtgc cgctgcgagcgctgccgcggcggcgacttcagccggcgctga

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