Lonchura striata (white-rumped munia): 110475188
Help
Entry
110475188 CDS
T05897
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04510
Focal adhesion
lsr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110475188 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110475188 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
OVT1
Motif
Other DBs
NCBI-GeneID:
110475188
NCBI-ProteinID:
XP_021394795
LinkDB
All DBs
Position
1A:complement(14640183..14681531)
Genome browser
AA seq
1785 aa
AA seq
DB search
MGRLPLYLCCCLALWPAAAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLRQPE
PYCIVSHLQEDKKCFICDSEDPFHDTLNPDSHRIENVVTTFAPNRLKLWWQSENGLENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGQTWHVYRYFAYDCESSFPGISTGPM
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFVKLHT
LGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVEGLDEEVEGMVHGHCMCRH
NTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVC
DDCQHNTVGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLI
AGQCRCKLFVEGERCDLCKEGFYGLSADDPVGCQSCACNPLGTHPGGNPCDSEMGNCFCK
RLVTGKQCNQCLPEHWGLSNDMDGCRPCDCDQGGALSNNCSSESGQCECRPHMFGRQCNQ
VEPGYYFISLDHYIYEAEEANLGPGVNIIERQYTPDRTPSWTGIGFVRVPEGAYLEFHID
NIPYSMEYDVLIRYEPQLPDQWEKAVISVSRPGKIPTGSRCGNTVPDDDNQVVSLSPGSR
YVVLPRPVCFEKGLNYTIRLELSQYSSVDTETENPYTLIDSLVLMPYCKSLDIFTVGGSG
EDVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLS
SVCDPNGGQCQCRPNVVGRQCNRCAPGTFGFGPSGCRPCECHVRGSYNAFCDVETGQCHC
FPGVYGRQCDRCLPSFWGFPSCQPCHCNGHADDCNPYTGECLSCRDHTAGHNCERCQAGY
YGDPILGSGDHCRPCPCPDGPESGRQFASGCYQDPVTLQVVCVCSVGYIGSRCDECASGF
FGSPDEVGGACQPCQCNNNIDTTDPEACDKRTGACMKCLYHTEGENCHLCREGYYGSALQ
QDCRKCVCNYLGTVREDCEGSESCRCEAATGQCRCLPNVVGQTCDRCAPHTWRLASGTGC
EQCDCDPARSLGPACNEFTGQCHCMPGFGGRTCRECQELFWGDPGVECLACDCNPRGIQT
PQCDRATGQCICNEGVEGLHCDKCSRGYSGFFPDCVPCHQCFALWDVIISELANRTQQFL
DRANTLKITGVTGPYQQTLNTLEEKLTEIKTIIAQNPAAEPLKNIGNLFEEAEKLTADVT
VKIADIEENLSALSAKSNSTDTDLSALETDAKSLDHVVKELAEQLEFIKISDVRGALDSI
TKYFQMSLEAEERVNASTVHPDSAVELSAQTRQEVEDLINEKEAQFKAKQEEQSRLLDEL
AGKLQSLDLSEVAEKTCGTAPGASCAESECGGLSCRTDEGKKKCGGPGCDGLVTVAHNAW
QKAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDLR
NLIKQIRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERVESLSDVEVIL
QQSAGDIARAEMLLEEAKRASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIK
GTQDLLTSIESENAASAETLNNATLRLFELEKSVEDLRQKATTNVGNVGNIEDKIISAKQ
NAEEVKKVLTNELSGKYRTVEELIAKKTEESAEARRKAGVLQDEAKALLAQANSKLQLLK
DLENTYENNQKVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctcccgctgtacctctgctgctgcctcgcgctgtggcccgcggcggcacag
gagcccgagtacagctatggctgcgccgagggcagctgctaccccgccaccggcgacctg
ctcatcggccgcgccgcccgcctctccgcctcctccacctgcggcctccgccagcccgag
ccctactgcatcgtcagccacctccaggaggacaaaaaatgtttcatatgtgattcggag
gatcccttccacgatactctcaatcccgacagtcaccgcattgaaaatgtcgtcaccaca
ttcgctccaaatcgcctgaagctctggtggcagtcggaaaatggtttggaaaatgtgact
atccagctggacctggaggctgagtttcatttcactcatctcattatgaccttcaagaca
tttcgtcctgctgcaatgttgattgaaagatcatctgactttgggcagacttggcacgtt
tacaggtattttgcttatgactgtgagagctcatttcctgggatttcaactggacccatg
aagaaagtggatgatataatctgtgattcccgatactctgacattgaaccttcaacagag
ggagaggtaatatatcgtgttctagatcctgcttttcgaattgaagatccatacagtcca
aggattcagaacctattaaagatcacaaatctgagagtcaaattcgtcaagctgcacacg
ctgggagataacctcttggactccaggatggagatccgagagaagtactactatgccatc
tacgacatggtggttcgtgggaactgcttctgctacggacacgccagtgagtgtgcgccg
gtggagggcttggatgaggaggtggaaggaatggttcatggtcactgcatgtgcagacat
aataccaaaggactaaactgtgagcagtgtttggatttctaccatgacttaccctggcgc
cctgctgaaggtcgcaatagtaatgcatgcaaaaagtgcaactgcaatggccactccagc
cagtgccacttcgacatggctgtgtacatgacaacggggaacaccagcgggggagtgtgc
gacgactgccagcacaacaccgtgggacgcaactgcgagcagtgcaagcccttctacttc
cagcacccggagagagacctgcgggaccccgacgtctgtgagccttgcaactgtgaccca
gctggctcccagaatggtgggatctgtgaccgctacactgatttctccactggcctcatt
gccggacagtgccgttgtaaattatttgtcgagggggagcgttgtgacctctgcaaagaa
ggtttctatggcctgagtgccgatgacccagtgggctgtcagtcttgtgcctgtaaccct
ctgggcacccaccccggcgggaatccttgtgattcagagatgggaaactgcttttgtaag
cgtctggtgacaggaaagcagtgcaatcaatgtctgcccgagcactggggcctgagcaat
gacatggatggatgtcggccgtgcgactgcgaccagggaggagcgctgagcaacaactgc
tcaagtgaatctggccaatgtgaatgccgaccccacatgtttggacgtcaatgcaaccag
gtggagcctggctattatttcatttcacttgatcattacatctacgaggcagaggaagcc
aacttgggtccaggagtgaacataatagagcgccagtacacaccagaccgcacaccgtca
tggacaggcataggatttgtgagagtccctgagggggcgtacctggaattccacattgac
aacatcccctactccatggagtatgatgttctgatccgctacgagccacagttgcctgat
cagtgggaaaaagctgtgatcagtgtctcacggccaggcaagattcctacaggtagccgc
tgtggcaacacagttcctgatgatgataatcaggtggtttcactgtcacctggatccaga
tacgttgttctcccgcggcctgtgtgcttcgagaaggggctgaattacaccatccgcctg
gagctgtcccagtactcctcggtggatacggagactgagaacccgtacacactcattgac
tctcttgttctcatgccatactgcaaatcgctggacatattcacagtgggaggctcgggc
gaagacgtggtcacaaacagtgcttgggaaactttccaaagataccggtgtttggaaaac
agcaggagtgttgtgaaaactcccatgacagatgtctgcaagaacataatattcagcatt
tctgcactactgcatgagactgcgttgtcatgccagtgtgacccgcagggctccctgagt
tcagtgtgcgaccccaatggaggacagtgccagtgtcgtcccaacgttgttggaagacag
tgcaacagatgtgcccctggcacctttgggtttgggccaagcggatgccgaccgtgcgag
tgccacgtccgaggctcttacaacgccttctgcgacgtggagacgggccagtgccactgc
ttccctggggtgtacgggcggcagtgcgaccgctgcctgcccagcttctggggcttcccc
agctgccagccctgccactgcaatggccacgctgacgactgcaacccctacactggggag
tgcctgagctgcagggaccacacagccggacacaactgtgagagatgccaggctggctac
tatggagaccccatcctgggatcaggtgaccactgccgcccctgcccttgccctgacggc
cccgagagtggacgccagtttgccagtggctgctaccaggatccagtcacactgcaagtc
gtgtgtgtctgtagcgtgggatacataggcagtcgatgtgatgaatgtgcgtctggcttc
tttgggagccctgatgaggttggtggcgcctgccagccgtgccagtgcaacaacaacatc
gacaccactgacccagaggcctgcgacaagaggactggagcgtgcatgaagtgcctgtat
cacaccgagggtgaaaactgccacctctgcagagagggctactacgggagtgccctgcag
caggactgcagaaagtgcgtctgcaactacctgggcactgtccgggaggactgcgagggc
tcggagagctgccgctgcgaggcggccacggggcagtgccggtgcctcccgaacgtggtg
gggcagacctgcgaccgctgtgccccccacacgtggcggctggccagcggcaccggctgc
gagcagtgcgactgcgaccccgcgcgctccctcggccccgcctgcaacgagttcacaggc
cagtgccactgcatgccgggtttcggaggccggacctgccgggagtgccaggagctcttc
tggggtgacccaggcgtggagtgcttagcatgtgactgcaaccctcgtggcatccagact
ccgcagtgtgaccgtgccactgggcagtgcatctgcaatgaaggggtggaggggctgcac
tgtgacaagtgctcccggggctactcaggcttcttccctgactgcgttccgtgccaccag
tgctttgccctctgggatgtgatcatcagcgagctggctaataggacccagcagttcttg
gacagggctaacaccctcaaaatcactggagtcactggtccataccagcagacgctcaac
actctggaggagaagctcactgaaattaaaaccatcatcgctcaaaatccagcagccgag
cccctgaagaacattgggaatctcttcgaggaagcagaaaagctgacagcagatgttaca
gttaagatagctgacatagaagaaaacctttcagccttatcagcaaagagcaatagcaca
gacacagacctgagtgccctggagacagatgccaaaagtctcgaccatgttgtgaaggaa
ctcgcagagcagctagagttcatcaagatctctgatgttcggggagccttggatagcatc
accaagtatttccagatgtccctggaggcagaggagagggtcaatgcctccactgttcat
cctgatagcgccgtggagctgtcagcacaaacgcggcaggaagtggaagacttaatcaat
gagaaggaggcccagttcaaggctaaacaagaggagcagtcacgccttctggatgaactc
gctggaaagctgcagagcctggacctctctgaggtggctgagaagacgtgtggcactgct
ccgggggcctcctgtgccgagtcggagtgcggggggctgagctgtcggacagacgagggg
aagaagaagtgtggaggccccggctgcgacgggctggtgactgtagctcacaatgcctgg
cagaaggctatggattttgacagagacatcctcagtgcattagcagaagttgagcaactc
tccagaatggtttctgaggcaaaacagagagcagatgaagcaaaacaaaatgcacaagca
gttttgcttaaaaccaatgctacaaaagaacaagtggacagaagcaatgaagatctgaga
aatcttattaaacagattagagacttcctaatgcaagacagtgctgacctggatagcatt
gaggcagtggctaatgaagtgctgaacatggagatgccaagcactcctcagcagctgcag
gccctgacagaagatattcgtgagcgcgtggaaagcctttctgatgttgaggtcattctg
cagcagagcgctggagacattgccagagcagaaatgctactggaggaagctaaaagagca
agcaaaggtgcaacagatgttaaagtcactgcagacatggtgaaagcagcactggaagaa
gctgaaaaagctcaaaatgcagctgaaaaagccatcaaacaagctgatgaagatattaaa
ggaactcaagacctgctgacttcaattgaatctgaaaatgcagcatctgcagaaacactg
aacaatgctaccttacgtctgtttgagctagagaagagtgttgaagaccttaggcaaaag
gctactacaaatgtagggaatgtgggaaatatagaagacaaaattattagtgcaaaacaa
aatgctgaagaagttaaaaaggtcctcaccaacgagctgagcggcaagtacaggaccgtg
gaagagctcattgccaagaagacagaggagtcggccgaggccaggaggaaagcaggcgtg
ttgcaagacgaagctaaagccttgttggctcaagcaaacagcaaactccagctgctcaaa
gatttggaaaatacatatgaaaacaatcagaaagttctggaagacaaagccaagcagttg
gtggagctggaagagacagttcgctccctcttacagacaatcagccagaaggttgctgtt
tatagcacttgcttataa
DBGET
integrated database retrieval system