KEGG   Lonchura striata (white-rumped munia): 110475220
Entry
110475220         CDS       T05897                                 
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
  KO
K06099  cold shock domain protein A
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr04530  Tight junction
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110475220 (YBX3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lsr03000]
    110475220 (YBX3)
   03041 Spliceosome [BR:lsr03041]
    110475220 (YBX3)
Transcription factors [BR:lsr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, DbpA-like
    110475220 (YBX3)
Spliceosome [BR:lsr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    110475220 (YBX3)
SSDB
Motif
Pfam: CSD OB_RNB Bim_N S1CSD-TOTE-2 Rho_RNA_bind
Other DBs
NCBI-GeneID: 110475220
NCBI-ProteinID: XP_021394876
UniProt: A0A218UGW2
LinkDB
Position
1A:67919967..67937037
AA seq 279 aa
MSEAPETSAASPAPAAPPVPAAAAAPDAAPKSPASASAPGAAVAEAAPGAAAAATTAAAE
SAKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETV
EFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYFGRRRGPPRSGGEGEIKDGV
TEGGQLQQVHRNPTYRPRFRRGPPRPRPAPVTGEAENKENHHEANAMSQQPLRRGYRRPY
NYRRRPRPASAPAQEGKETKATETPAENPAPVTEQSGAE
NT seq 840 nt   +upstreamnt  +downstreamnt
atgagcgaggcgccggagaccagcgccgccagccccgcgcccgccgcgccgcccgtcccg
gccgcggccgccgcgccggacgccgctcccaagagccccgccagcgcctccgcgccgggt
gcggcggtcgccgaggcggcccccggcgccgccgccgcagccacaaccgcggcggccgag
tcggcgaagaaagtgctggccaccaaagttcttggcacagtcaagtggttcaatgtcaga
aatggatatggctttatcaacagaaatgacaccaaagaagatgtgtttgttcatcagacg
gcgataaagaaaaacaatccacggaagtacctgcgcagcgttggcgatggagagactgta
gagtttgatgtggttgagggagagaagggtgcagaagcagctaatgtcactggtccagat
ggagtccccgtggaaggcagccgctacgccgcggaccggcgccgctatcgacggggctac
tttggccgacgccggggcccacctcggagtggtggtgagggagaaatcaaggatggggtc
acagaaggaggacaacttcagcaagtgcacaggaatcctacctaccgtccccgctttcgc
agagggccccctcgcccacgccctgccccggtgactggagaggctgaaaacaaggagaac
catcacgaagccaatgccatgagccagcagccgctgcgccgcggctaccggcgcccctac
aactaccggcgccggccgcgcccagccagcgctccggcacaggagggcaaagagacaaag
gcaactgaaacacctgctgaaaatcctgctccagtgacagagcagagtggcgctgagtaa

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