Lonchura striata (white-rumped munia): 110475220
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Entry
110475220 CDS
T05897
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
KO
K06099
cold shock domain protein A
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110475220 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110475220 (YBX3)
03041 Spliceosome [BR:
lsr03041
]
110475220 (YBX3)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
110475220 (YBX3)
Spliceosome [BR:
lsr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110475220 (YBX3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
Bim_N
S1CSD-TOTE-2
Rho_RNA_bind
Motif
Other DBs
NCBI-GeneID:
110475220
NCBI-ProteinID:
XP_021394876
UniProt:
A0A218UGW2
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All DBs
Position
1A:67919967..67937037
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AA seq
279 aa
AA seq
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MSEAPETSAASPAPAAPPVPAAAAAPDAAPKSPASASAPGAAVAEAAPGAAAAATTAAAE
SAKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETV
EFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYFGRRRGPPRSGGEGEIKDGV
TEGGQLQQVHRNPTYRPRFRRGPPRPRPAPVTGEAENKENHHEANAMSQQPLRRGYRRPY
NYRRRPRPASAPAQEGKETKATETPAENPAPVTEQSGAE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgccggagaccagcgccgccagccccgcgcccgccgcgccgcccgtcccg
gccgcggccgccgcgccggacgccgctcccaagagccccgccagcgcctccgcgccgggt
gcggcggtcgccgaggcggcccccggcgccgccgccgcagccacaaccgcggcggccgag
tcggcgaagaaagtgctggccaccaaagttcttggcacagtcaagtggttcaatgtcaga
aatggatatggctttatcaacagaaatgacaccaaagaagatgtgtttgttcatcagacg
gcgataaagaaaaacaatccacggaagtacctgcgcagcgttggcgatggagagactgta
gagtttgatgtggttgagggagagaagggtgcagaagcagctaatgtcactggtccagat
ggagtccccgtggaaggcagccgctacgccgcggaccggcgccgctatcgacggggctac
tttggccgacgccggggcccacctcggagtggtggtgagggagaaatcaaggatggggtc
acagaaggaggacaacttcagcaagtgcacaggaatcctacctaccgtccccgctttcgc
agagggccccctcgcccacgccctgccccggtgactggagaggctgaaaacaaggagaac
catcacgaagccaatgccatgagccagcagccgctgcgccgcggctaccggcgcccctac
aactaccggcgccggccgcgcccagccagcgctccggcacaggagggcaaagagacaaag
gcaactgaaacacctgctgaaaatcctgctccagtgacagagcagagtggcgctgagtaa
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