Lonchura striata (white-rumped munia): 110475298
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Entry
110475298 CDS
T05897
Symbol
SCFD1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110475298 (SCFD1)
Membrane trafficking [BR:
lsr04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
110475298 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
110475298 (SCFD1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
110475298
NCBI-ProteinID:
XP_021395004
UniProt:
A0A218V8F9
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Position
5:complement(27067709..27116853)
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AA seq
632 aa
AA seq
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MAAGIREKQTVALKRMLNFNVPPVKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDAIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDI
ANAAIGANAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETIM
DTIVDSLFCFFVTLGAIPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQ
FSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESAGTESTPAGARPK
KKNKKSYDLTISDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGIEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKSRKLDVYFEYEEKIMS
KSTLDKSLLDMISDPDAGTPEDKMRLFLIYYISSAQAPSEIDLEQYKKALMDAGCNLAPL
SYIKQWKAFTKMASAPTSYGNTTPKPLGLFSRVMNTGSQFVMEGVKNLVLKQQNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLIDY
IKGKQGKHVLYGCSELFNATQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggatccgggagaagcagacagtggctttgaaacgtatgctgaacttcaat
gttcctccagttaaaaacagcacaggagaaccagtatggaaggttctcatttatgacaga
tttggccaagatatcatctcacctttgctttcagtgaaagagctgagggatatggggatc
actttgcatcttcttttgcattcagatcgggatgctattccagatgttccagctgtttac
tttgtaatgccaacagaagaaaatattgacagaatgtgccaggatcttcgaaaccagctt
tatgagtcttactatttaaacttcatttctgccatttcaagaagtaaattggaagatatt
gcgaatgctgctataggtgctaatgcagttactcaagtggctaaggtgtttgatcaatat
cttaattttattactttagaagatgatatgtttgtattgtgtaaccaaaacaaagaactt
gtttcataccgtgctattaaccgaccagatataacagacactgaaatggaaacaataatg
gacactattgttgatagtctcttctgtttttttgttacacttggggctatacctataatc
agatgctcaagaggaactgcagctgaaatggtggcagtgaaactggataagaagctcaga
gagaatctaagagatgccagaaacagtctctttacaggtgacacacttggagctggacag
ttcagcttccaaaggcccttattagtccttgttgacagaaacatagatttagcaacacct
ctacatcatacttggacataccaagctttagtgcatgatgttctggatttccatttgaat
agggttaacttggaagaatcagcaggaacagaaagtactccagcaggcgctagacctaag
aaaaaaaacaagaagtcctatgatttaactatatctgataaattctggcaaaagcataag
ggcagtccttttccagaggtggcagagtctgttcagcaagaactggaatcttacagagcc
caagaagatgaagtcaaaagacttaaaagtatcatgggcattgaaggggaggatgaagga
gcaataagtatgctttcagataatacagctaagctaacttcagctgtcagctctcttcca
gaacttctggaaaagaagagactcattgatcttcatacgaatgttgcaacagccgttttg
gagcacataaagagtcgaaagctggatgtttattttgaatatgaagaaaaaataatgagc
aaatccactttggataaatctcttctggacatgatttctgacccagatgcaggaactcct
gaagacaaaatgcgattatttctcatctattacataagctcagctcaggcaccttcagag
attgacttggagcagtacaaaaaagcattgatggatgcaggttgtaatctcgctcctttg
agctacataaaacaatggaaagcttttactaagatggcttcagctccaaccagctatgga
aacactacacctaaacctttgggtctgttttcacgtgttatgaatacaggatcacagttt
gtaatggaaggagtgaagaacttggtactgaagcaacaaaatttgccagtcacacgtatt
ttggacaaccttatggagatgaagtcaaatcctgagacagatgactaccggtattttgac
cccaagatgctgcgaggcagtgacagctcagttccaagaaataaaaatccattccaggag
gccatagtgtttgtagttggaggaggcaactatattgaatatcaaaatcttattgactat
ataaagggtaaacaaggcaaacatgtcctgtatggctgcagtgaactttttaatgctaca
cagtttataaaacagctgtcccaacttggccagaaataa
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