Lonchura striata (white-rumped munia): 110475368
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Entry
110475368 CDS
T05897
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1
KO
K08367
runt-related transcription factor 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110475368 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110475368 (RUNX1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
110475368 (RUNX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RunxI
Runt
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
110475368
NCBI-ProteinID:
XP_021395135
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All DBs
Position
1:complement(1582009..1675622)
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AA seq
424 aa
AA seq
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MRIPVDTSTSRRFTPPSTTLSPGKMSEPLALPGAEHSGALPGKLRAADRSMVEVLADHPG
ELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNA
TAAMKNQVARFNDLRFVGRSGRGHRQKIDEQTKPGSLSFSERLSELEQLRRTAMRVSPHH
PAPTPNPRASLNHSTAFNPQPQSQIQDSRQVQPSPPWSYDQSYQYLGSIAAPAVHPATPI
SPGRAGGMSSLTAELSSRLSGASDLTAFSDPRVGIDRSFPALPSISDPRMHYPGAFTYTP
TPVSSGIGIGMSAMSTATRYHTYLPPPYPGSSQAQGSPFQTSSPSYHLYYGTSAGSYQFS
MISGGDRSPPRIHPPCTNASTGSALLNPNLPNQSDVVEAEGSHSNSPTNMASTARLEEAV
WRPY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccccgtagataccagcaccagccgccgcttcacgccgccctccaccacgctg
agcccggggaagatgagcgagccgctggcgctgcccggcgccgagcacagcggggctttg
ccggggaagctgcgcgccgccgaccgcagcatggtggaggtcctggcggatcaccccggg
gagctggtgcgcaccgacagccccaacttcctctgctccgtgctgcccacgcactggcgc
tgcaacaagacgctgcccatcgccttcaaggtggtggccctgggggacgtccccgacggg
accctggtgacggtgatggccgggaatgacgagaattactcggcggagctgcgcaacgcc
acggccgccatgaagaaccaggtggcgcgattcaacgacctgcgcttcgtgggcaggagc
ggcagaggacatcgtcagaaaatagatgagcagacaaagcccggcagcttgtccttttct
gagcgcctgagcgagctggagcagttgcgtcgcacggccatgagggtcagcccacaccac
ccagcccccacacccaaccctcgagcctccttgaaccacagcacagcttttaaccctcag
cctcagagtcagatccaggactcccggcaggtgcagccctcgccgccctggtcctacgac
cagtcctaccagtacctgggctccatcgccgcgcccgccgtgcacccggccacgcccatc
tcacctggccgggccggcggcatgagctcgctcacggccgagctctccagccgcctctca
ggagcgtcggacctgacggcgttcagcgacccccgggtggggatcgaccgctccttcccg
gcgctgccgtccatctccgaccctcgcatgcactacccgggcgccttcacctacacgccc
acgcccgtcagctccggcatcggcatcggcatgtcggccatgtccacggccacgcgctac
cacacgtacctcccgccgccctaccccggctcgtcccaggctcagggcagccccttccag
accagctccccgtcctaccacctgtactacggcacctcggccggctcctaccagttctcc
atgatctccggcggcgaccgctcgccgccgcgcatccacccgccctgcaccaacgcctcc
acgggctccgcgctgctcaaccccaacctgcccaaccaaagcgacgtggtggaggccgaa
ggcagccacagcaactcgcccaccaacatggccagcacggcgaggctggaggaggccgtg
tggaggccctactga
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