Lonchura striata (white-rumped munia): 110475417
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Entry
110475417 CDS
T05897
Symbol
FGD3
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 3 isoform X1
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110475417 (FGD3)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
IQ_SEC7_PH
FYVE_2
LRR_Zer-1
PH_16
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
110475417
NCBI-ProteinID:
XP_021395205
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Position
12:179573..286092
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AA seq
930 aa
AA seq
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MNIKKGKSLNLAGQFLLGRPCSRKEQATFKWPSVHILLSCPCSPFQIKCHIDSNPVLEAC
GELQHISSGQCLHQAGRKPKTKTALAKMHPLQKPQVPPKPVHLKPGQERIPPAPSRPLPA
DPKSSRNLAPGEEEIPISAGVNTLIEKFESIRQPVHILQRNQLNLALKMEPGLDSSKQMS
LCDCDTVASSDSSTNDKTELDEAEPSILCSTDLTNTDIMKIKELSIGDNKSHEDCTVVTV
SKESQEELGTKDSTAELNGNGKIPNRDSGIDSPSCSVAGETFPSEEGAEQKKPSMAGNPG
EMEPDRKGTKPSSVEQKRDSMQDDDSDIDEGSSEEQEIAEVPKLEYLDVNKCTEPQKLFN
IANELLHTEEAYVKRLHLLDQVFCTKLSEAGISSEVITGIFSNISSIYCFHGQFLLPELK
TRITEEWSVNPRLGDILQKLAPFLKMYGEYVKNFDRAMDIVNTCMQRSSSFKDVVQNIQK
QEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEESPDRKDAEKSLELISTAANHSNA
AIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNSMVL
YCVPKLRLIGQKFSVREKMDIAGLQVQEIAKQNVAHTFSITGKKRSLELQARTEEEKREW
IHVIQATIEKHKQNSETFRAFNSSFSQEEDHLPDSSIASTSSVESMPGADGGGALGGSDS
SKKSSKSKRDKEKQSCKSCGESFNSITKRRHHCKQCGAVICAKCSEFKPLADNSRHNRVC
KECFLQLPASPCSPGVEAVGEQKKRLAAEKQGILMAENSLFSSYLQFLEKGKTWYKMWVT
IPKSEPLVLYLQGSSQDGRSPRPIPLPGYEVSLPGSGEKFDVKHVFKLCQSHQTLYFSAE
DEDLQIKWMEILTKAAKGETEDTAEGLSNP
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaaaaaaggaaaaagcctgaatttggctgggcaatttttattggggaggccc
tgcagcaggaaggaacaggcaaccttcaagtggcctagtgtccatatattgcttagttgc
ccttgctctcctttccaaatcaagtgtcacattgactccaatcctgtgttggaagcatgt
ggggaactgcagcatatcagctcagggcaatgtctccatcaggctggaaggaagcccaaa
accaaaactgcactggccaaaatgcatcctctacagaaaccccaagtacctcctaaacct
gtccatctcaaacctgggcaggaaagaattcctcctgcaccatctcggcctttgccagct
gatcccaagtcatcaaggaacttagcacctggagaggaagaaataccaatatcagcagga
gtcaacacgctcattgagaaatttgaaagtattaggcaacctgtacatattcttcaaaga
aaccagctaaatttagctcttaagatggaacctggcctggactcatccaagcagatgagc
ttgtgtgactgtgacacagtggcttccagtgactcttccacaaatgacaaaactgaattg
gatgaagctgagcccagcatactgtgcagcacagatctaactaacacagacataatgaaa
attaaagagctgagcataggtgataacaaaagccatgaagattgtactgttgtgactgtg
agcaaagagtcccaagaagagcttggcactaaggactcaactgcagaactgaatgggaat
ggtaaaattcccaacagagacagtggcattgacagtccttcctgtagtgtagctggggaa
acattccctagtgaagaaggggcagagcagaagaagcccagcatggctgggaatccagga
gagatggaacctgacagaaagggcaccaaaccttcctctgtggagcagaagagagattcc
atgcaggatgacgacagtgatattgatgaaggaagcagtgaggagcaagagatagcagaa
gtgccaaaattagagtatttggatgtaaacaagtgtacagagccccaaaagctattcaac
attgccaatgagctgctccacacagaagaagcatatgttaaaagactccatctcttggac
caggttttttgcactaaattgtccgaagcagggatctcatctgaagtgataacaggcatc
ttctcaaatatttcttccatctattgtttccatggacaatttcttcttcctgaactcaaa
acaagaattacagaagaatggagtgtcaacccacggctaggagatatcctgcagaaactt
gctccttttctgaaaatgtatggagaatatgtaaagaattttgacagggcaatggacata
gtgaacacatgtatgcagcggtcctcttccttcaaagatgttgttcagaatatacagaaa
caggaggtgtgtggaaacctgaccttgcagcatcacatgcttgaaccagtgcaaaggatt
cctcgttatgagcttctcctgaaggactatttaaagaaacttccagaagaatctccagac
aggaaagatgctgaaaagtcactggagctgatatcgacagcagcaaaccattccaatgca
gccatccggaagatggaaaagatgcacaagcttttggaagtctatgagcgcctgggtggt
gaagaggatattgttaacccagccaacgagctcattaaagaaggacacattcagaaactt
tcagctaagaatggcacagcacaggacaggtatttattcctgtttaacagcatggtgctg
tactgtgtgccaaagctgaggctgatcggccagaagttcagtgtccgagagaagatggac
attgcaggactgcaggtccaagaaattgccaagcaaaatgtggctcatacattttccata
acaggaaaaaagagatcattggaactacaagccaggacagaagaggagaagagggaatgg
attcatgtcattcaagccacaatagaaaagcacaaacagaacagtgagaccttcagagct
ttcaatagctctttttcacaagaggaggaccatcttcctgattcttcaatagccagcacc
agctcagttgaatcaatgccaggagcagatggtggtggtgcattaggagggagtgattcc
tctaagaaatcttccaaatccaagcgagacaaagagaaacagtcttgtaagagctgcggc
gagagcttcaattccatcacaaagaggcggcaccattgtaagcagtgtggggcagtgatc
tgtgcaaaatgctctgagtttaagccacttgcagataacagccgccataatcgagtgtgt
aaagagtgtttcctgcagctcccagcaagcccctgcagccctggggtggaagcagttggg
gaacagaagaaaagactagctgcagagaagcaaggcatccttatggctgaaaacagcctc
ttcagcagctacctccagttccttgagaaagggaagacttggtacaaaatgtgggtgacc
atccctaagagtgaacctcttgttctgtatctgcaaggaagcagccaggatggacgaagc
ccacgtccaatccctctgcctggctatgaagtcagtttaccaggttctggtgagaagttt
gatgtgaagcacgtttttaagctttgccagtcccatcaaactctctatttcagtgcagaa
gatgaagacctacagataaaatggatggaaattctcaccaaagctgccaaaggggagact
gaggatacagctgaagggctcagcaacccatag
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