Lonchura striata (white-rumped munia): 110475453
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Entry
110475453 CDS
T05897
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
110475453 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110475453 (HDAC4)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110475453 (HDAC4)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
110475453 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
110475453
NCBI-ProteinID:
XP_021395283
LinkDB
All DBs
Position
7:1596930..1771174
Genome browser
AA seq
1089 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPPRVNHMPSSVDVSTALPLQVAPSSVPMDLRLDHQFSMP
VTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQSGVSGTYNHPVLGMYDSKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTGTADSACNSAPG
SGPSSPNNSSNNISTENGIAGSVTSIQAETSLAHRLVNREGSVTQLPLYTSPSLPNITLG
LPATGPSSAGQAQQDAERLAIPALQQRISLFPGTHLTPYLSTTALERDGGTAHNPLLQHM
VLLEQPTAQTPLVTDWYLSGLPLHAQPLVGGERVSPSIHKLRQHRPLGRTQSAPLPQNAQ
ALQQLVIQQQHQQFLEKHKQQFQQQQLHINKIISKPTEPARQHESHPEETEEELREHQAL
LEEPYGERAAGQKEPPALASVVQVKQEPIESDEEEAEPQQELESGQRQAEQELLFRQQAL
LLEQQRIHQLRNYQASLEAAGMPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTG
LVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVH
SEAHTLLYGTNPLNRQKLDSKKLLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAV
GCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKIL
IVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFT
GGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGY
LTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVFQQRANANAVH
SMEKVIEIHSKYWHSLQRFASTVGYSLVEAQKCENEEAETVTAMASLSVGVKPAEKRPED
EPMEEEPPL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatgggctttctggcagagatcagccagttgagctgttg
aatccacctcgagtgaaccacatgcccagctctgttgacgtgagcacagccttgcccttg
caagtggcgccaagctcggtgcccatggacctgcggctggatcaccagttctccatgccg
gtgacggagccgacgctgcgggagcagcagctgcagcaggagctgctggccctcaagcag
aagcagcagatccagaggcagatcctgatcgcagagttccagcggcagcacgagcagctc
tctcggcagcatgaggcgcagctgcacgagcacatcaagcagcagcaggagatgctggcc
atgaagcatcagcaggagctgttggagcaccagaggaagctggagcagcaccgacaggag
caggagctggagaagcagcaccgagagcagaaactgcagcagctgaaaaacaaagagaaa
gggaaagagagtgcagtggcaagcacagaagtgaagatgaaattgcaggaatttgtgtta
aacaagaagaaggctttggcccaccggaatctcaaccactgcatatccagcgaccctcgc
ttctggtacgggaagacccagcacagctctctggaccagagctccccaccccaaagcggc
gtctccggcacctacaaccacccagtcctggggatgtacgattccaaagatgacttccca
ctcagaaaaacagcctctgagcccaacctgaagctgcgctccagactaaagcagaaggtg
gctgagaggaggagcagccccctcctgcgcaggaaggacgggcccgtggtgacggcgctc
aagaagcgcccgctggatgtcacaggtacggcggactctgcatgcaacagtgctcctgga
tctggtcccagctctccgaacaacagctccaacaacatcagcactgagaacggcattgcg
ggatcagtcacgagtatccaagcagagaccagcctggctcacaggctcgtgaaccgcgag
ggctccgtgacgcagctcccgctctacacctcgccctcgctgcccaacatcacactagga
ctgcctgccaccggcccctccagcgcaggacaagcgcagcaggatgcggagaggcttgca
atcccagccttacagcagcggatctccttatttcctggcactcacctcacaccctacctg
agcactacagcattggagagggatgggggaactgcacacaaccctctcctgcagcacatg
gtcctactggaacagccaactgcacaaacgcccctggtcacagactggtatctttcagga
ctgccgctgcacgcacagcccctggtgggtggagagagggtctccccttcgatccacaag
ctgcggcagcaccgcccgctcgggcgcacccagtctgctcccctgccccagaacgcccag
gcgctccagcagctggtgatccagcagcagcaccagcagttcctggaaaaacacaaacag
cagttccagcagcagcagctgcacatcaacaagatcatctccaaacccacggagccggca
cggcagcacgagagccaccccgaggagacggaggaggagctgcgggagcaccaggccctg
ctggaggagccctacggcgagcgggccgcgggccagaaggagcccccggcgctggccagc
gtggtgcaggtcaagcaggagcccatcgagagtgacgaggaggaggcagagccgcagcag
gagctggagtccgggcagaggcaggcggagcaggagctgctcttccgccagcaagccctg
ctcctggagcagcagcggattcaccagctgaggaactaccaggcgtcgctggaggcggct
ggcatgcccgtgtccttcgggggacaccggcccctgtcccgggcacagtcctcccccgcc
tcggccaccttccccatgtccgtgcaggagccacccactaagccaaggttcacaacaggg
cttgtgtacgacaccttgatgctgaagcaccagtgcacctgtggaaataccaacagccac
cctgagcacgcaggcaggatccagagcatctggtccaggctccaggagacggggctgcgg
ggcaagtgtgagtgcatccgtggcagaaaggcgacgctggaggagctgcagacagttcac
tcggaagcccacacactgctctatggcacaaaccctctgaacaggcagaaactggacagc
aagaagcttctaggttccctaacgtcaatgtttgtcaggctgccttgcggtggtgttggg
gtcgacagtgacaccatttggaatgaggtgcactcatcgggcgctgctcgcctggccgtg
ggctgtgtcatcgagctggtgttcaaagtggccacgggagaactgaagaatggatttgct
gttgttcggcctccgggtcaccatgcggaggagagcacacccatgggtttctgctatttt
aactccgtggcaattgcagccaagctgctccagcaaaggctcaatgtgagcaaaatcctc
attgtggactgggatgtccaccatgggaatggtactcagcaggccttctacaacgatccc
aatgtcctttatatctcactccatcgctacgatgatggcaacttcttcccaggcagtggc
gcaccggatgaggttggcacaggagcaggagttggtttcaatgttaacatggcatttact
ggtggtctggatccgcccatgggagacacggaatatttaactgccttcaggacagtagtg
atgcccattgccaatgagtttgccccagacgttgtgctggtgtcatctggtttcgatgct
gtggaagggcaccccacacccctgggaggatataatctgtcagcaaaatgcttcgggtac
ctgacgaagcagctgatgggcctggccgggggccgcgtggtgctggccctcgagggtggc
cacgacctcactgccatctgcgacgcctcggaggcctgcgtgtctgccctgctgggaaac
gagcttgaccctcttccagagaaagtgttccagcagagggcaaacgctaacgcggtgcat
tccatggagaaagtcattgagatccacagcaagtactggcattccctccagcgttttgcc
tccacggtgggatattccctggtggaggcccagaagtgtgagaatgaagaggcggagaca
gtgacagccatggcatcgctgtcggtgggtgtgaagccggcggagaagagacctgaggat
gaacccatggaagaggagcctcccctgtag
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integrated database retrieval system
